RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 CD7P09564 240 aa8.03□□□□□ -1.12
PRPF38B-201ENST00000370021 SPXQ9BT56 116 aa8.03□□□□□ -1.12
PRPF38B-201ENST00000370021 SLC25A20O43772 301 aa8.03□□□□□ -1.12
PRPF38B-201ENST00000370021 TSPAN13O95857 204 aa8.03□□□□□ -1.12
PRPF38B-201ENST00000370021 IGLV1-47P01700 117 aa8.03□□□□□ -1.12
PRPF38B-201ENST00000370021 SCGB1A1P11684 91 aa8.03□□□□□ -1.12
PRPF38B-201ENST00000370021 FAM57AQ8TBR7 257 aa8.03□□□□□ -1.12
PRPF38B-201ENST00000370021 ZNF688P0C7X2 276 aa8.03□□□□□ -1.12
PRPF38B-201ENST00000370021 IGLC6P0CF74 106 aa8.03□□□□□ -1.12
PRPF38B-201ENST00000370021 PF4V1P10720 104 aa8.03□□□□□ -1.12
PRPF38B-201ENST00000370021 MRGPRG-AS1Q2M3A8 158 aa8.03□□□□□ -1.12
PRPF38B-201ENST00000370021 U3KQK5 164 aa8.02□□□□□ -1.13
PRPF38B-201ENST00000370021 PSMG4Q5JS54 123 aa8.02□□□□□ -1.13
PRPF38B-201ENST00000370021 FAM159AQ6UWV7 190 aa8.02□□□□□ -1.13
PRPF38B-201ENST00000370021 PHLDA1Q8WV24 401 aaPredicted RBP8.02□□□□□ -1.13
PRPF38B-201ENST00000370021 SMAD5-AS1Q9Y6J3 95 aa8.02□□□□□ -1.13
PRPF38B-201ENST00000370021 GRNP28799 593 aaKnown RBP8.02□□□□□ -1.13
PRPF38B-201ENST00000370021 LINC00574Q9H8X3 128 aa8.02□□□□□ -1.13
PRPF38B-201ENST00000370021 FAM208BQ5VWN6 2430 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 C11orf86A6NJI1 115 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 THBDP07204 575 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 PRO3102Q9H379 93 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 ATP6V0E1O15342 81 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 ZNF883P0CG24 379 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 VMO1Q7Z5L0 202 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 TEN1Q86WV5 123 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 ZNF625Q96I27 306 aaPredicted RBP8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 SPATA25Q9BR10 227 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 PRO1854Q9UHT4 67 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 A4D1N5 150 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 B9A039 149 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 RPL13AP40429 203 aaKnown RBP8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 GAGE5Q13069 117 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 GAGE6Q13070 117 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 NUP37Q8NFH4 326 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 DPH3P1Q9H4G8 78 aa8.01□□□□□ -1.13
PRPF38B-201ENST00000370021 TRAV8-4A0A0B4J246 113 aa8□□□□□ -1.13
PRPF38B-201ENST00000370021 MORN3Q6PF18 240 aaPredicted RBP8□□□□□ -1.13
PRPF38B-201ENST00000370021 Q6ZS46 218 aa8□□□□□ -1.13
PRPF38B-201ENST00000370021 BAALCQ8WXS3 180 aa8□□□□□ -1.13
PRPF38B-201ENST00000370021 MUC6Q6W4X9 2439 aa8□□□□□ -1.13
PRPF38B-201ENST00000370021 TAL2Q16559 108 aa8□□□□□ -1.13
PRPF38B-201ENST00000370021 SLC50A1Q9BRV3 221 aa8□□□□□ -1.13
PRPF38B-201ENST00000370021 CCL21O00585 134 aa8□□□□□ -1.13
PRPF38B-201ENST00000370021 RS1O15537 224 aa8□□□□□ -1.13
PRPF38B-201ENST00000370021 IGLV11-55A0A075B6I3 123 aa7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 C2orf82Q6UX34 121 aa7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 CACNA1AO00555 2505 aa7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 TRAV8-3A0A0A6YYJ7 113 aa7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 TRAV21A0A0B4J279 112 aa7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 TMEM262E9PQX1 116 aa7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 CRIP2P52943 208 aaPredicted RBP7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 EEF1AKMT3Q96AZ1 226 aa7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 TRAV12-2A0A075B6T6 113 aa7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 CRYGBP07316 175 aa7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 CFAP126Q5VTH2 177 aa7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 C15orf53Q8NAA6 179 aa7.99□□□□□ -1.13
PRPF38B-201ENST00000370021 CHD8Q9HCK8 2581 aa7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 BUB3O43684 328 aa7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 USP9XQ93008 2570 aaPredicted RBP7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 TRBV7-3A0A075B6L6 115 aa7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 RBAKDNA6NC62 111 aa7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 HERV-K104P63124 156 aa7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 NDUFA11Q86Y39 141 aa7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 VCX2Q9H322 139 aa7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 TEX49A0A1B0GTD5 131 aa7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 SDHAF1A6NFY7 115 aa7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 J3QQQ9 107 aa7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 SMCPP49901 116 aaPredicted RBP7.98□□□□□ -1.13
PRPF38B-201ENST00000370021 ACACBO00763 2458 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 TRAV4A0A0B4J268 109 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 GAGE12JA6NER3 117 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 KNCNA6PVL3 124 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 GAGE7O76087 117 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 COX6CP09669 75 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 GAGE12FP0CL80 117 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 GAGE12GP0CL81 117 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 GAGE12IP0CL82 117 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 GAGE4Q13068 117 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 TCTEX1D4Q5JR98 221 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 BRD3OSQ6XYD6 125 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 GATD1Q8NB37 220 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 MRPS12O15235 138 aaKnown RBP7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 PAX8Q06710 450 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 LINC01559Q495D7 138 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 DGAT2L7PQ6IED9 249 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 DAND5Q8N907 189 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 NRACQ8N912 160 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 RASL10AQ92737 203 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 DUX3Q96PT4 197 aa7.97□□□□□ -1.13
PRPF38B-201ENST00000370021 SHISA9B4DS77 424 aa7.96□□□□□ -1.13
PRPF38B-201ENST00000370021 CCDC179H3BU77 68 aa7.96□□□□□ -1.13
PRPF38B-201ENST00000370021 HOXB4P17483 251 aaPredicted RBP7.96□□□□□ -1.13
PRPF38B-201ENST00000370021 ZNF876PQ49A33 203 aa7.96□□□□□ -1.13
PRPF38B-201ENST00000370021 MUSTN1Q8IVN3 82 aa7.96□□□□□ -1.13
PRPF38B-201ENST00000370021 IFITM1P13164 125 aa7.96□□□□□ -1.14
PRPF38B-201ENST00000370021 PMVKQ15126 192 aa7.96□□□□□ -1.14
PRPF38B-201ENST00000370021 PRR9Q5T870 116 aa7.96□□□□□ -1.14
PRPF38B-201ENST00000370021 C10orf126Q8N4M7 172 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms