RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 TMEM86BQ8N661 226 aa8.13□□□□□ -1.11
PRDM1-201ENST00000369089 PLXNA4Q9HCM2 1894 aa8.13□□□□□ -1.11
PRDM1-201ENST00000369089 C11orf86A6NJI1 115 aa8.13□□□□□ -1.11
PRDM1-201ENST00000369089 TFF1P04155 84 aa8.13□□□□□ -1.11
PRDM1-201ENST00000369089 C6orf226Q5I0X4 101 aa8.13□□□□□ -1.11
PRDM1-201ENST00000369089 TOMM6Q96B49 74 aa8.13□□□□□ -1.11
PRDM1-201ENST00000369089 RSPO1Q2MKA7 263 aaPredicted RBP8.13□□□□□ -1.11
PRDM1-201ENST00000369089 HHLA3Q9XRX5 114 aa8.13□□□□□ -1.11
PRDM1-201ENST00000369089 ZNF876PQ49A33 203 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 DAND5Q8N907 189 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 NDUFA4L2Q9NRX3 87 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 FER1L5A0AVI2 2057 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 TICRRQ7Z2Z1 1910 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 IGHV3OR16-13A0A075B7E8 117 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 IGHV3-74A0A0B4J1X5 117 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 ZNF22P17026 224 aaPredicted RBP8.12□□□□□ -1.11
PRDM1-201ENST00000369089 ZNF524Q96C55 264 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 CADP27708 2225 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 Q6ZSR3 168 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 MSRB1Q9NZV6 116 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 U3KQK5 164 aa8.12□□□□□ -1.11
PRDM1-201ENST00000369089 FAM27E3Q08E93 113 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 TRBV6-1A0A0K0K1D8 114 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 TRBV12-3P01733 135 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 IGHV1-2P23083 117 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 MYCNOSP40205 109 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 HELZP42694 1942 aaKnown RBP8.11□□□□□ -1.11
PRDM1-201ENST00000369089 H7C423 109 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 IGHV3-30P01768 117 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 IGHV3-30-5P0DP03 117 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 GGNQ86UU5 652 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 C9orf106Q8NAJ2 232 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 ORMDL1Q9P0S3 153 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 ECSCRQ19T08 205 aa8.11□□□□□ -1.11
PRDM1-201ENST00000369089 MED13LQ71F56 2210 aa8.1□□□□□ -1.11
PRDM1-201ENST00000369089 IGHV3-66A0A0C4DH42 116 aa8.1□□□□□ -1.11
PRDM1-201ENST00000369089 SNRPD3P62318 126 aaKnown RBP8.1□□□□□ -1.11
PRDM1-201ENST00000369089 Q0VFX4 171 aa8.1□□□□□ -1.11
PRDM1-201ENST00000369089 PATE2Q6UY27 113 aa8.1□□□□□ -1.11
PRDM1-201ENST00000369089 SRRM4A7MD48 611 aaKnown RBP8.1□□□□□ -1.11
PRDM1-201ENST00000369089 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
PRDM1-201ENST00000369089 GP9P14770 177 aa8.1□□□□□ -1.11
PRDM1-201ENST00000369089 KHDC1LQ5JSQ8 128 aa8.1□□□□□ -1.11
PRDM1-201ENST00000369089 SDHAF1A6NFY7 115 aa8.1□□□□□ -1.11
PRDM1-201ENST00000369089 P0C879 139 aa8.1□□□□□ -1.11
PRDM1-201ENST00000369089 H0YGX0 51 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 COX7A2LO14548 114 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 CRIP2P52943 208 aaPredicted RBP8.09□□□□□ -1.11
PRDM1-201ENST00000369089 CFHR4Q92496 578 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 IGHV3OR16-8A0A075B7F1 116 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 LST1O00453 97 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 NXPH4O95158 308 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 IGKV1-16P04430 117 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 UPK3BQ9BT76 320 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 MUC6Q6W4X9 2439 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 PLXNA2O75051 1894 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 WI2-2373I1.2A0A1W2PRP0 233 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 Q6JHZ5 121 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 CREBBPQ92793 2442 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 DENND4CQ5VZ89 1909 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 IGLV2-14P01704 120 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 IGHG3P01860 377 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 FAM216BQ8N7L0 139 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 PROK2Q9HC23 129 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 C14orf132Q9NPU4 83 aa8.09□□□□□ -1.11
PRDM1-201ENST00000369089 IGHV3-23P01764 117 aa8.08□□□□□ -1.12
PRDM1-201ENST00000369089 FUSP35637 526 aaKnown RBP eCLIP8.08□□□□□ -1.12
PRDM1-201ENST00000369089 IGHV3-49A0A0A0MS15 119 aa8.08□□□□□ -1.12
PRDM1-201ENST00000369089 PRB3Q04118 309 aaPredicted RBP8.08□□□□□ -1.12
PRDM1-201ENST00000369089 IGFL4Q6B9Z1 124 aa8.08□□□□□ -1.12
PRDM1-201ENST00000369089 SPRR3Q9UBC9 169 aa8.08□□□□□ -1.12
PRDM1-201ENST00000369089 I3L3M4 83 aa8.08□□□□□ -1.12
PRDM1-201ENST00000369089 SPRY2O43597 315 aa8.08□□□□□ -1.12
PRDM1-201ENST00000369089 C1orf159Q96HA4 380 aa8.08□□□□□ -1.12
PRDM1-201ENST00000369089 USF3Q68DE3 2245 aa8.08□□□□□ -1.12
PRDM1-201ENST00000369089 JMJD7-PLA2G4BH0Y9G9 81 aa8.07□□□□□ -1.12
PRDM1-201ENST00000369089 H3BRN7 92 aa8.07□□□□□ -1.12
PRDM1-201ENST00000369089 NEXN-AS1Q8NBZ9 246 aa8.07□□□□□ -1.12
PRDM1-201ENST00000369089 ZMAT4Q9H898 229 aa8.07□□□□□ -1.12
PRDM1-201ENST00000369089 DOPEY2Q9Y3R5 2298 aa8.07□□□□□ -1.12
PRDM1-201ENST00000369089 IGKV1OR2-108A0A075B7D4 117 aa8.07□□□□□ -1.12
PRDM1-201ENST00000369089 LY6G6EA0A0G2JKS1 128 aa8.07□□□□□ -1.12
PRDM1-201ENST00000369089 NBR2O15453 112 aa8.07□□□□□ -1.12
PRDM1-201ENST00000369089 HOXD3P31249 432 aaPredicted RBP8.07□□□□□ -1.12
PRDM1-201ENST00000369089 BLCAPP62952 87 aa8.07□□□□□ -1.12
PRDM1-201ENST00000369089 U3KQA8 63 aa8.07□□□□□ -1.12
PRDM1-201ENST00000369089 IGHV1OR15-1A0A075B7D0 117 aa8.06□□□□□ -1.12
PRDM1-201ENST00000369089 IGKV3OR2-268A0A0C4DH90 116 aa8.06□□□□□ -1.12
PRDM1-201ENST00000369089 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.06□□□□□ -1.12
PRDM1-201ENST00000369089 WT1-ASQ06250 92 aa8.06□□□□□ -1.12
PRDM1-201ENST00000369089 CD177Q8N6Q3 437 aa8.06□□□□□ -1.12
PRDM1-201ENST00000369089 NBL1P41271 181 aa8.06□□□□□ -1.12
PRDM1-201ENST00000369089 LINC01560Q8TB33 94 aa8.06□□□□□ -1.12
PRDM1-201ENST00000369089 TMEM263Q8WUH6 116 aaKnown RBP8.06□□□□□ -1.12
PRDM1-201ENST00000369089 TIMM17AQ99595 171 aa8.06□□□□□ -1.12
PRDM1-201ENST00000369089 ZGRF1Q86YA3 2104 aa8.06□□□□□ -1.12
PRDM1-201ENST00000369089 KMT2EQ8IZD2 1858 aa8.05□□□□□ -1.12
PRDM1-201ENST00000369089 CEMP1Q6PRD7 247 aaPredicted RBP8.05□□□□□ -1.12
PRDM1-201ENST00000369089 F8WEM9 126 aa8.05□□□□□ -1.12
PRDM1-201ENST00000369089 RPL36AP83881 106 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms