RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 NDUFC2-KCTD14E9PQ53 114 aa13.04□□□□□ -0.32
NID1-202ENST00000366595 ATP5EP56381 51 aaPredicted RBP13.04□□□□□ -0.32
NID1-202ENST00000366595 BPY2O14599 106 aa13.04□□□□□ -0.32
NID1-202ENST00000366595 IGLV3-1P01715 115 aa13.04□□□□□ -0.32
NID1-202ENST00000366595 C9orf66Q5T8R8 295 aa13.04□□□□□ -0.32
NID1-202ENST00000366595 NCOR1O75376 2440 aa13.04□□□□□ -0.32
NID1-202ENST00000366595 IGHV1-58A0A0C4DH39 117 aa13.04□□□□□ -0.32
NID1-202ENST00000366595 ARTNQ5T4W7 220 aa13.03□□□□□ -0.32
NID1-202ENST00000366595 UPK3BQ9BT76 320 aa13.03□□□□□ -0.32
NID1-202ENST00000366595 TRBV7-3A0A075B6L6 115 aa13.03□□□□□ -0.32
NID1-202ENST00000366595 LINC00173Q6ZV60 143 aa13.03□□□□□ -0.32
NID1-202ENST00000366595 PDCD11Q14690 1871 aaKnown RBP13.03□□□□□ -0.32
NID1-202ENST00000366595 CCL24O00175 119 aa13.03□□□□□ -0.32
NID1-202ENST00000366595 NCR3O14931 201 aa13.03□□□□□ -0.32
NID1-202ENST00000366595 COX7BP24311 80 aa13.03□□□□□ -0.32
NID1-202ENST00000366595 DOCK11Q5JSL3 2073 aa13.03□□□□□ -0.32
NID1-202ENST00000366595 FAM110AQ9BQ89 295 aa13.03□□□□□ -0.32
NID1-202ENST00000366595 SPANXB1Q9NS25 103 aaPredicted RBP13.03□□□□□ -0.32
NID1-202ENST00000366595 H0Y9J4 135 aa13.02□□□□□ -0.32
NID1-202ENST00000366595 CLEC2BQ92478 149 aa13.02□□□□□ -0.32
NID1-202ENST00000366595 SCN5AQ14524 2016 aa13.02□□□□□ -0.32
NID1-202ENST00000366595 TRBV6-1A0A0K0K1D8 114 aa13.02□□□□□ -0.33
NID1-202ENST00000366595 ASPHD1Q5U4P2 390 aa13.02□□□□□ -0.33
NID1-202ENST00000366595 TNS1Q9HBL0 1735 aaKnown RBP13.02□□□□□ -0.33
NID1-202ENST00000366595 DOCK10Q96BY6 2186 aa13.02□□□□□ -0.33
NID1-202ENST00000366595 NDUFV3P56181 108 aaKnown RBP13.02□□□□□ -0.33
NID1-202ENST00000366595 NPBQ8NG41 125 aa13.02□□□□□ -0.33
NID1-202ENST00000366595 SLX1AQ9BQ83 275 aa13.02□□□□□ -0.33
NID1-202ENST00000366595 CTRLP40313 264 aa13.01□□□□□ -0.33
NID1-202ENST00000366595 SPAG11BQ08648 103 aa13.01□□□□□ -0.33
NID1-202ENST00000366595 PRR15LQ9BU68 103 aa13.01□□□□□ -0.33
NID1-202ENST00000366595 TAF1LQ8IZX4 1826 aa13.01□□□□□ -0.33
NID1-202ENST00000366595 DIAPH2-AS1Q14236 149 aa13.01□□□□□ -0.33
NID1-202ENST00000366595 CASC2Q6XLA1 102 aa13.01□□□□□ -0.33
NID1-202ENST00000366595 IGLV10-54A0A075B6I4 117 aa13□□□□□ -0.33
NID1-202ENST00000366595 I3L2K1 104 aa13□□□□□ -0.33
NID1-202ENST00000366595 IGKV4-1P06312 121 aa13□□□□□ -0.33
NID1-202ENST00000366595 HOXB4P17483 251 aaPredicted RBP13□□□□□ -0.33
NID1-202ENST00000366595 NUPR1O60356 82 aa13□□□□□ -0.33
NID1-202ENST00000366595 USP17L23D6RBM5 183 aa13□□□□□ -0.33
NID1-202ENST00000366595 NDUFA11Q86Y39 141 aa13□□□□□ -0.33
NID1-202ENST00000366595 CRIPAKQ8N1N5 446 aa13□□□□□ -0.33
NID1-202ENST00000366595 K7ENP7 123 aa13□□□□□ -0.33
NID1-202ENST00000366595 MIR7-3HGQ8N6C7 128 aa12.99□□□□□ -0.33
NID1-202ENST00000366595 ODF1Q14990 250 aa12.99□□□□□ -0.33
NID1-202ENST00000366595 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
NID1-202ENST00000366595 B9D2Q9BPU9 175 aa12.99□□□□□ -0.33
NID1-202ENST00000366595 MIAQ16674 131 aa12.99□□□□□ -0.33
NID1-202ENST00000366595 SEM1Q6ZVN7 128 aa12.99□□□□□ -0.33
NID1-202ENST00000366595 ARID2Q68CP9 1835 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 IGLV11-55A0A075B6I3 123 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 CENPVL3A0A0U1RRI6 287 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 ABCA4P78363 2273 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 WNK3Q9BYP7 1800 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 CADP27708 2225 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 IGHV3-30P01768 117 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 IGHV3-33P01772 117 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 IGHV3-30-3P0DP02 117 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 IGHV3-30-5P0DP03 117 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 TDRG1Q3Y452 100 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 SPATA12Q7Z6I5 190 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 C20orf197Q8N268 126 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 KIAA2026Q5HYC2 2103 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 ABCA7Q8IZY2 2146 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 NDUFC1O43677 76 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 DAND5Q8N907 189 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 MSRB1Q9NZV6 116 aa12.98□□□□□ -0.33
NID1-202ENST00000366595 RNF183Q96D59 192 aa12.97□□□□□ -0.33
NID1-202ENST00000366595 TP53BP1Q12888 1972 aaPredicted RBP12.97□□□□□ -0.33
NID1-202ENST00000366595 TRAV23DV6A0A075B6W5 121 aa12.97□□□□□ -0.33
NID1-202ENST00000366595 K7EMT4 169 aa12.97□□□□□ -0.33
NID1-202ENST00000366595 TEX22C9J3V5 150 aa12.97□□□□□ -0.33
NID1-202ENST00000366595 HIST2H2BDQ6DRA6 164 aa12.97□□□□□ -0.33
NID1-202ENST00000366595 K7EIM0 57 aa12.97□□□□□ -0.33
NID1-202ENST00000366595 NRXN2Q9P2S2 1712 aa12.97□□□□□ -0.33
NID1-202ENST00000366595 RPL39P62891 51 aaKnown RBP12.96□□□□□ -0.33
NID1-202ENST00000366595 IGKV1-17P01599 117 aa12.96□□□□□ -0.33
NID1-202ENST00000366595 C3orf22Q8N5N4 141 aa12.96□□□□□ -0.33
NID1-202ENST00000366595 A0A0G2JMZ2 1700 aa12.96□□□□□ -0.34
NID1-202ENST00000366595 LRRC37A2A6NM11 1700 aa12.96□□□□□ -0.34
NID1-202ENST00000366595 WISP1O95388 367 aa12.96□□□□□ -0.34
NID1-202ENST00000366595 RSPO1Q2MKA7 263 aaPredicted RBP12.96□□□□□ -0.34
NID1-202ENST00000366595 NYNRINQ9P2P1 1898 aaKnown RBP12.96□□□□□ -0.34
NID1-202ENST00000366595 C20orf203Q8NBC4 194 aa12.95□□□□□ -0.34
NID1-202ENST00000366595 WNK2Q9Y3S1 2297 aa12.95□□□□□ -0.34
NID1-202ENST00000366595 COL4A5P29400 1685 aa12.95□□□□□ -0.34
NID1-202ENST00000366595 UBR3Q6ZT12 1888 aa12.95□□□□□ -0.34
NID1-202ENST00000366595 TRBV10-1A0A0K0K1A3 114 aa12.95□□□□□ -0.34
NID1-202ENST00000366595 WI2-2373I1.2A0A1W2PRP0 233 aa12.95□□□□□ -0.34
NID1-202ENST00000366595 GTSF1Q8WW33 167 aa12.95□□□□□ -0.34
NID1-202ENST00000366595 HHLA3Q9XRX5 114 aa12.95□□□□□ -0.34
NID1-202ENST00000366595 DEFB112Q30KQ8 113 aa12.94□□□□□ -0.34
NID1-202ENST00000366595 IGLV2-23P01705 113 aa12.94□□□□□ -0.34
NID1-202ENST00000366595 CTSGP08311 255 aa12.94□□□□□ -0.34
NID1-202ENST00000366595 MAPK1IP1LQ8NDC0 245 aa12.94□□□□□ -0.34
NID1-202ENST00000366595 FANCD2OSQ96PS1 177 aa12.94□□□□□ -0.34
NID1-202ENST00000366595 AJUBAQ96IF1 538 aa12.94□□□□□ -0.34
NID1-202ENST00000366595 PROK2Q9HC23 129 aa12.94□□□□□ -0.34
NID1-202ENST00000366595 APRG1Q8IVJ8 170 aa12.94□□□□□ -0.34
NID1-202ENST00000366595 IGHV7-81A0A0B4J1V7 117 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms