RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 CKS2P33552 79 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 FXYD6P3P58550 94 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 KLKP1Q107X0 134 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 IDO2Q6ZQW0 420 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 OR8I2Q8N0Y5 310 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 SKA2Q8WVK7 121 aaPredicted RBP0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 SMIM7Q9BQ49 75 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 HIGD1AQ9Y241 93 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 HSPB11Q9Y547 144 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 KMT2DO14686 5537 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 UNC13AQ9UPW8 1703 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 LAMB1P07942 1786 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 KDM6BO15054 1643 aa0.03□□□□□ -2.4
RNU4-56P-201ENST00000364700 DEGS1O15121 323 aa0.03□□□□□ -2.4
RNU4-56P-201ENST00000364700 DPM2O94777 84 aa0.03□□□□□ -2.4
RNU4-56P-201ENST00000364700 AKR1D1P51857 326 aa0.03□□□□□ -2.4
RNU4-56P-201ENST00000364700 TNS1Q9HBL0 1735 aaKnown RBP0.03□□□□□ -2.4
RNU4-56P-201ENST00000364700 SYNE2Q8WXH0 6885 aaKnown RBP0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 UHRF1BP1LA0JNW5 1464 aa0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 GPR98Q8WXG9 6306 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 TRBV10-1A0A0K0K1A3 114 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 OR2H2O95918 312 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 CCKP06307 115 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 HLA-DRB4P13762 266 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 PCBD1P61457 104 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 PLGLB1Q02325 96 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 EMX2Q04743 252 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 MORN2Q502X0 79 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 SLC25A26Q70HW3 274 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 SLC35B3Q9H1N7 401 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 ATG5Q9H1Y0 275 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 HLA-DRB4X5D2U9 266 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 CACNA1CQ13936 2221 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 CSMD3Q7Z407 3707 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 SYNJ1O43426 1573 aa0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 PARP14Q460N5 1801 aa0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 A0A087WTM6 91 aa0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 PNMA8CA0A1B0GUJ8 204 aa0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 PAEPP09466 180 aa0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 MPC1LP0DKB6 136 aa0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 HIST1H1BP16401 226 aaKnown RBP0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 LSM3P62310 102 aaKnown RBP0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 PSPHP78330 225 aa0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 OR2T2Q6IF00 324 aa0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 MRPL40Q9NQ50 206 aaKnown RBP0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 TMEM14BQ9NUH8 114 aa0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 FSIP2Q5CZC0 6907 aa0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 ARFGEF1Q9Y6D6 1849 aa0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 BORCS7-ASMTA0A0B4J1R7 106 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 TRAV2A0A0B4J234 112 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 SSC5DA1L4H1 1573 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 ADGRB1O14514 1584 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 TFF1P04155 84 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 PYYP10082 97 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 KDELR1P24390 212 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 ELOF1P60002 83 aaKnown RBP0□□□□□ -2.41
RNU4-56P-201ENST00000364700 IQCJQ1A5X6 159 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 TCTE3Q8IZS6 198 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 PPDPFLQ8WWR9 84 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 AHCTF1Q8WYP5 2266 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 ANKRD30AQ9BXX3 1397 aa0□□□□□ -2.41
RNU4-56P-201ENST00000364700 LSM2Q9Y333 95 aaKnown RBP0□□□□□ -2.41
RNU4-56P-201ENST00000364700 MACF1Q9UPN3 7388 aaKnown RBP-0□□□□□ -2.41
RNU4-56P-201ENST00000364700 ZNF292O60281 2723 aa-0□□□□□ -2.41
RNU4-56P-201ENST00000364700 FXYD1O00168 92 aa-0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 PITX3O75364 302 aa-0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 SLC25A6P12236 298 aa-0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 POLR2JP52435 117 aaKnown RBP-0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 ATP11AUNQ6ZP68 121 aa-0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 BANF2Q9H503 90 aa-0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 HIVEP3Q5T1R4 2406 aa-0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 CEP152O94986 1710 aa-0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 NRXN2Q9P2S2 1712 aa-0.01□□□□□ -2.41
RNU4-56P-201ENST00000364700 TEX49A0A1B0GTD5 131 aa-0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 M0R2P5 195 aa-0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 SCGB1A1P11684 91 aa-0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 DR1Q01658 176 aa-0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 SPINK6Q6UWN8 80 aa-0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 ATP6V0E2Q8NHE4 81 aa-0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 PROK2Q9HC23 129 aa-0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 TAS2R8Q9NYW2 309 aa-0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 SSPOA2VEC9 5147 aa-0.02□□□□□ -2.41
RNU4-56P-201ENST00000364700 SIPA1L3O60292 1781 aaPredicted RBP-0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 CCDC171Q6TFL3 1326 aa-0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 NPC2P61916 151 aa-0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 CCDC153Q494R4 210 aa-0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 UNQ5815/PRO19632Q6UWF5 114 aa-0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 AKAP14Q86UN6 197 aa-0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 NDUFA11Q86Y39 141 aa-0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 TSKUQ8WUA8 353 aa-0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 SPANXA1Q9NS26 97 aa-0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 MYH9P35579 1960 aaKnown RBP-0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 ERCC6Q03468 1493 aa-0.03□□□□□ -2.41
RNU4-56P-201ENST00000364700 TRAV17A0A0B4J275 112 aa-0.04□□□□□ -2.42
RNU4-56P-201ENST00000364700 ARPC5O15511 151 aa-0.04□□□□□ -2.42
RNU4-56P-201ENST00000364700 SMIM24O75264 130 aa-0.04□□□□□ -2.42
RNU4-56P-201ENST00000364700 TSPAN19P0C672 248 aa-0.04□□□□□ -2.42
RNU4-56P-201ENST00000364700 CMPK1P30085 196 aa-0.04□□□□□ -2.42
RNU4-56P-201ENST00000364700 CLLU1Q5K131 121 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms