RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 C11orf72Q8NBR9 251 aa7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 TMEM263Q8WUH6 116 aaKnown RBP7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 TIMM8BQ9Y5J9 83 aaPredicted RBP7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 A0A1B0GXF2 115 aa7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 SPINK4O60575 86 aa7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 PRM2P04554 102 aa7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 S100A6P06703 90 aa7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 CACNG7P62955 275 aa7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 MRPL54Q6P161 138 aaKnown RBP7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 RNASE8Q8TDE3 154 aaKnown RBP7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 FAM210BQ96KR6 192 aa7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 RCHY1Q96PM5 261 aa7.41□□□□□ -1.22
VIPAS39-201ENST00000327028 A0A1B0GW15 77 aa7.4□□□□□ -1.22
VIPAS39-201ENST00000327028 AZU1P20160 251 aa7.4□□□□□ -1.22
VIPAS39-201ENST00000327028 RIGQ13278 110 aa7.4□□□□□ -1.22
VIPAS39-201ENST00000327028 OR10AG1Q8NH19 301 aa7.4□□□□□ -1.22
VIPAS39-201ENST00000327028 IL17DQ8TAD2 202 aa7.4□□□□□ -1.22
VIPAS39-201ENST00000327028 RNF183Q96D59 192 aa7.4□□□□□ -1.22
VIPAS39-201ENST00000327028 C16orf74Q96GX8 76 aa7.4□□□□□ -1.22
VIPAS39-201ENST00000327028 X6R8D5 127 aa7.4□□□□□ -1.22
VIPAS39-201ENST00000327028 IGHV4-4A0A075B6R2 117 aa7.4□□□□□ -1.23
VIPAS39-201ENST00000327028 SMIM9A6NGZ8 99 aa7.4□□□□□ -1.23
VIPAS39-201ENST00000327028 NXPH4O95158 308 aa7.4□□□□□ -1.23
VIPAS39-201ENST00000327028 AKR1D1P51857 326 aa7.4□□□□□ -1.23
VIPAS39-201ENST00000327028 RRN3P1Q2M238 152 aa7.4□□□□□ -1.23
VIPAS39-201ENST00000327028 RASL11AQ6T310 242 aa7.4□□□□□ -1.23
VIPAS39-201ENST00000327028 ZNF493Q6ZR52 646 aa7.4□□□□□ -1.23
VIPAS39-201ENST00000327028 PHLDA3Q9Y5J5 127 aa7.4□□□□□ -1.23
VIPAS39-201ENST00000327028 MUC21A0A0G2JKD1 596 aa7.39□□□□□ -1.23
VIPAS39-201ENST00000327028 MUC21A0A140T8X8 626 aa7.39□□□□□ -1.23
VIPAS39-201ENST00000327028 HBBP68871 147 aa7.39□□□□□ -1.23
VIPAS39-201ENST00000327028 C12orf57Q99622 126 aa7.39□□□□□ -1.23
VIPAS39-201ENST00000327028 GSN-AS1Q9NRJ2 163 aa7.39□□□□□ -1.23
VIPAS39-201ENST00000327028 TP53TG1Q9Y2A0 90 aa7.39□□□□□ -1.23
VIPAS39-201ENST00000327028 SPANXN1Q5VSR9 72 aa7.39□□□□□ -1.23
VIPAS39-201ENST00000327028 ZFP82Q8N141 532 aa7.39□□□□□ -1.23
VIPAS39-201ENST00000327028 SPXQ9BT56 116 aa7.39□□□□□ -1.23
VIPAS39-201ENST00000327028 SPRY2O43597 315 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 S100A8P05109 93 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 RAB5AP20339 215 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 COX19Q49B96 90 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 PTH2Q96A98 100 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 MUC4Q99102 2169 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 M0R381 172 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 NTF3P20783 257 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 S100A12P80511 92 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 TWIST1Q15672 202 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 GATD1Q8NB37 220 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 SYT8Q8NBV8 401 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 OR11H2Q8NH07 326 aa7.38□□□□□ -1.23
VIPAS39-201ENST00000327028 PLAC8L1A1L4L8 177 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 SNURFLB1AK76 121 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 M0R2P5 195 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 CAMPP49913 170 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 NBEAL2Q6ZNJ1 2754 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 LINC00587B1AMM8 73 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 MIFP14174 115 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 SSTP61278 116 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 DAZ2Q13117 558 aaKnown RBP7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 DEFB121Q5J5C9 76 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 PIK3CD-AS1Q5SR53 167 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 TMEM136Q6ZRR5 245 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 OVOL2Q9BRP0 275 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 GNB1LQ9BYB4 327 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 MSRB1Q9NZV6 116 aa7.37□□□□□ -1.23
VIPAS39-201ENST00000327028 MT-ND6P03923 174 aa7.36□□□□□ -1.23
VIPAS39-201ENST00000327028 DMRTA1Q5VZB9 504 aa7.36□□□□□ -1.23
VIPAS39-201ENST00000327028 TRGC1P0CF51 173 aa7.36□□□□□ -1.23
VIPAS39-201ENST00000327028 ZNF876PQ49A33 203 aa7.36□□□□□ -1.23
VIPAS39-201ENST00000327028 SBSPONQ8IVN8 264 aa7.36□□□□□ -1.23
VIPAS39-201ENST00000327028 MRAPQ8TCY5 172 aa7.36□□□□□ -1.23
VIPAS39-201ENST00000327028 AP1S3Q96PC3 154 aa7.36□□□□□ -1.23
VIPAS39-201ENST00000327028 NDUFAF3Q9BU61 184 aa7.36□□□□□ -1.23
VIPAS39-201ENST00000327028 RETNQ9HD89 108 aa7.36□□□□□ -1.23
VIPAS39-201ENST00000327028 IGHV4-28A0A0C4DH34 117 aa7.35□□□□□ -1.23
VIPAS39-201ENST00000327028 HLA-DQA1P01909 254 aa7.35□□□□□ -1.23
VIPAS39-201ENST00000327028 RPS10P46783 165 aaKnown RBP7.35□□□□□ -1.23
VIPAS39-201ENST00000327028 RAB4BP61018 213 aa7.35□□□□□ -1.23
VIPAS39-201ENST00000327028 Q8NAQ8 132 aa7.35□□□□□ -1.23
VIPAS39-201ENST00000327028 TMEM191AQ9H0A3 160 aa7.35□□□□□ -1.23
VIPAS39-201ENST00000327028 SMIM15Q7Z3B0 74 aa7.35□□□□□ -1.23
VIPAS39-201ENST00000327028 NOP10Q9NPE3 64 aaKnown RBP7.35□□□□□ -1.23
VIPAS39-201ENST00000327028 MRPL16Q9NX20 251 aaKnown RBP7.35□□□□□ -1.23
VIPAS39-201ENST00000327028 LGALS9BQ3B8N2 356 aa7.34□□□□□ -1.23
VIPAS39-201ENST00000327028 SPATA25Q9BR10 227 aa7.34□□□□□ -1.23
VIPAS39-201ENST00000327028 TM2D3Q9BRN9 247 aa7.34□□□□□ -1.23
VIPAS39-201ENST00000327028 RASL10AQ92737 203 aa7.34□□□□□ -1.23
VIPAS39-201ENST00000327028 TRAPPC1Q9Y5R8 145 aa7.34□□□□□ -1.23
VIPAS39-201ENST00000327028 TRGV1A0A0A0MS02 117 aa7.33□□□□□ -1.24
VIPAS39-201ENST00000327028 C21orf62-AS1Q17RA5 79 aa7.33□□□□□ -1.24
VIPAS39-201ENST00000327028 MRPL18Q9H0U6 180 aaKnown RBP7.33□□□□□ -1.24
VIPAS39-201ENST00000327028 A8MWV9 139 aa7.33□□□□□ -1.24
VIPAS39-201ENST00000327028 EVI2AP22794 236 aa7.33□□□□□ -1.24
VIPAS39-201ENST00000327028 EMP1P54849 157 aa7.33□□□□□ -1.24
VIPAS39-201ENST00000327028 Q6ZTI0 123 aa7.33□□□□□ -1.24
VIPAS39-201ENST00000327028 DPH3P1Q9H4G8 78 aa7.33□□□□□ -1.24
VIPAS39-201ENST00000327028 LYRM9A8MSI8 78 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 APCSP02743 223 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 SLAQ13239 276 aa7.32□□□□□ -1.24
VIPAS39-201ENST00000327028 FAM104BQ5XKR9 115 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms