RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 ANKRD29Q8N6D5 301 aa18.4■□□□□ 0.54
PACS2-201ENST00000325438 GATD1Q8NB37 220 aa18.4■□□□□ 0.54
PACS2-201ENST00000325438 TRAV21A0A0B4J279 112 aa18.4■□□□□ 0.54
PACS2-201ENST00000325438 CD7P09564 240 aa18.4■□□□□ 0.54
PACS2-201ENST00000325438 GATA3P23771 443 aa18.4■□□□□ 0.54
PACS2-201ENST00000325438 TCL1BO95988 128 aa18.4■□□□□ 0.54
PACS2-201ENST00000325438 PF4V1P10720 104 aa18.4■□□□□ 0.54
PACS2-201ENST00000325438 IGFL2Q6UWQ7 119 aa18.4■□□□□ 0.54
PACS2-201ENST00000325438 ZNF688P0C7X2 276 aa18.39■□□□□ 0.54
PACS2-201ENST00000325438 CFAP161Q6P656 301 aa18.39■□□□□ 0.54
PACS2-201ENST00000325438 TRPT1Q86TN4 253 aaKnown RBP18.39■□□□□ 0.54
PACS2-201ENST00000325438 C3orf56Q8N813 242 aa18.39■□□□□ 0.54
PACS2-201ENST00000325438 NTN5Q8WTR8 489 aaPredicted RBP18.39■□□□□ 0.54
PACS2-201ENST00000325438 CUL9Q8IWT3 2517 aa18.39■□□□□ 0.53
PACS2-201ENST00000325438 A0A0U1RRA0 63 aa18.39■□□□□ 0.53
PACS2-201ENST00000325438 BAALCQ8WXS3 180 aa18.39■□□□□ 0.53
PACS2-201ENST00000325438 BUB3O43684 328 aa18.39■□□□□ 0.53
PACS2-201ENST00000325438 SLC25A20O43772 301 aa18.39■□□□□ 0.53
PACS2-201ENST00000325438 MYO9AB2RTY4 2548 aa18.39■□□□□ 0.53
PACS2-201ENST00000325438 GRNP28799 593 aaKnown RBP18.38■□□□□ 0.53
PACS2-201ENST00000325438 TCF15Q12870 199 aa18.38■□□□□ 0.53
PACS2-201ENST00000325438 PTPN13Q12923 2485 aa18.38■□□□□ 0.53
PACS2-201ENST00000325438 C11orf86A6NJI1 115 aa18.38■□□□□ 0.53
PACS2-201ENST00000325438 TEN1Q86WV5 123 aa18.38■□□□□ 0.53
PACS2-201ENST00000325438 NFE4Q86UQ8 179 aa18.38■□□□□ 0.53
PACS2-201ENST00000325438 SMG1Q96Q15 3661 aaKnown RBP18.38■□□□□ 0.53
PACS2-201ENST00000325438 LINC01548A6NM66 108 aa18.37■□□□□ 0.53
PACS2-201ENST00000325438 MORN3Q6PF18 240 aaPredicted RBP18.37■□□□□ 0.53
PACS2-201ENST00000325438 TRBV7-3A0A075B6L6 115 aa18.37■□□□□ 0.53
PACS2-201ENST00000325438 SETD2Q9BYW2 2564 aaPredicted RBP18.36■□□□□ 0.53
PACS2-201ENST00000325438 TMEM262E9PQX1 116 aa18.36■□□□□ 0.53
PACS2-201ENST00000325438 JPT2Q9H910 190 aa18.36■□□□□ 0.53
PACS2-201ENST00000325438 PRO1854Q9UHT4 67 aa18.36■□□□□ 0.53
PACS2-201ENST00000325438 ZMAT4Q9H898 229 aa18.36■□□□□ 0.53
PACS2-201ENST00000325438 CCL21O00585 134 aa18.36■□□□□ 0.53
PACS2-201ENST00000325438 NRACQ8N912 160 aa18.36■□□□□ 0.53
PACS2-201ENST00000325438 OVOL3O00110 214 aa18.34■□□□□ 0.53
PACS2-201ENST00000325438 PAX8Q06710 450 aa18.34■□□□□ 0.53
PACS2-201ENST00000325438 TCTEX1D4Q5JR98 221 aa18.34■□□□□ 0.53
PACS2-201ENST00000325438 LINC00477Q96M19 166 aa18.34■□□□□ 0.53
PACS2-201ENST00000325438 IGHV7-81A0A0B4J1V7 117 aa18.34■□□□□ 0.53
PACS2-201ENST00000325438 HERV-K104P63124 156 aa18.34■□□□□ 0.53
PACS2-201ENST00000325438 PLA2G2CQ5R387 149 aa18.34■□□□□ 0.53
PACS2-201ENST00000325438 OPRPNQ99935 248 aaPredicted RBP18.34■□□□□ 0.53
PACS2-201ENST00000325438 CFAP126Q5VTH2 177 aa18.34■□□□□ 0.53
PACS2-201ENST00000325438 TRAV12-3A0A0B4J271 114 aa18.33■□□□□ 0.53
PACS2-201ENST00000325438 SPXQ9BT56 116 aa18.33■□□□□ 0.53
PACS2-201ENST00000325438 IGHV3-73A0A0B4J1V6 119 aa18.33■□□□□ 0.52
PACS2-201ENST00000325438 A4D1N5 150 aa18.33■□□□□ 0.52
PACS2-201ENST00000325438 NCOR2Q9Y618 2525 aa18.33■□□□□ 0.52
PACS2-201ENST00000325438 TRAV8-4A0A0B4J246 113 aa18.32■□□□□ 0.52
PACS2-201ENST00000325438 RASL10AQ92737 203 aa18.31■□□□□ 0.52
PACS2-201ENST00000325438 Q6ZS46 218 aa18.31■□□□□ 0.52
PACS2-201ENST00000325438 NDUFA11Q86Y39 141 aa18.31■□□□□ 0.52
PACS2-201ENST00000325438 MUC6Q6W4X9 2439 aa18.3■□□□□ 0.52
PACS2-201ENST00000325438 DMXL1Q9Y485 3027 aa18.3■□□□□ 0.52
PACS2-201ENST00000325438 J3QQQ9 107 aa18.3■□□□□ 0.52
PACS2-201ENST00000325438 PMVKQ15126 192 aa18.3■□□□□ 0.52
PACS2-201ENST00000325438 RNASE13Q5GAN3 156 aaKnown RBP18.3■□□□□ 0.52
PACS2-201ENST00000325438 ZZEF1O43149 2961 aa18.3■□□□□ 0.52
PACS2-201ENST00000325438 LAMA5O15230 3695 aa18.3■□□□□ 0.52
PACS2-201ENST00000325438 SDHAF1A6NFY7 115 aa18.3■□□□□ 0.52
PACS2-201ENST00000325438 RPL13AP40429 203 aaKnown RBP18.3■□□□□ 0.52
PACS2-201ENST00000325438 IGHG4P01861 327 aa18.3■□□□□ 0.52
PACS2-201ENST00000325438 GAGE5Q13069 117 aa18.3■□□□□ 0.52
PACS2-201ENST00000325438 GAGE6Q13070 117 aa18.3■□□□□ 0.52
PACS2-201ENST00000325438 VCX2Q9H322 139 aa18.29■□□□□ 0.52
PACS2-201ENST00000325438 F8W735 103 aaPredicted RBP18.28■□□□□ 0.52
PACS2-201ENST00000325438 PAPPA-AS1Q5QFB9 102 aa18.28■□□□□ 0.52
PACS2-201ENST00000325438 TOMM6Q96B49 74 aa18.28■□□□□ 0.52
PACS2-201ENST00000325438 COX6CP09669 75 aa18.28■□□□□ 0.52
PACS2-201ENST00000325438 PRR9Q5T870 116 aa18.28■□□□□ 0.52
PACS2-201ENST00000325438 PIFOQ8TCI5 191 aa18.28■□□□□ 0.52
PACS2-201ENST00000325438 TMEM190Q8WZ59 177 aa18.28■□□□□ 0.52
PACS2-201ENST00000325438 C10orf126Q8N4M7 172 aa18.28■□□□□ 0.52
PACS2-201ENST00000325438 NEXN-AS1Q8NBZ9 246 aa18.28■□□□□ 0.52
PACS2-201ENST00000325438 C2orf82Q6UX34 121 aa18.27■□□□□ 0.52
PACS2-201ENST00000325438 SMCPP49901 116 aaPredicted RBP18.27■□□□□ 0.52
PACS2-201ENST00000325438 LRBAP50851 2863 aa18.27■□□□□ 0.52
PACS2-201ENST00000325438 IGHV7-4-1A0A0J9YVY3 117 aa18.27■□□□□ 0.51
PACS2-201ENST00000325438 CDIP1Q9H305 208 aa18.27■□□□□ 0.51
PACS2-201ENST00000325438 USP9YO00507 2555 aaPredicted RBP18.26■□□□□ 0.51
PACS2-201ENST00000325438 TRAV12-1A0A0B4J245 112 aa18.26■□□□□ 0.51
PACS2-201ENST00000325438 IGLV2-18A0A075B6J9 118 aa18.26■□□□□ 0.51
PACS2-201ENST00000325438 SAA4P35542 130 aa18.26■□□□□ 0.51
PACS2-201ENST00000325438 PRO0461Q9UI25 63 aa18.25■□□□□ 0.51
PACS2-201ENST00000325438 PPP1R17O96001 155 aa18.25■□□□□ 0.51
PACS2-201ENST00000325438 NPBQ8NG41 125 aa18.25■□□□□ 0.51
PACS2-201ENST00000325438 VCYO14598 125 aa18.25■□□□□ 0.51
PACS2-201ENST00000325438 TMEM95Q3KNT9 176 aa18.24■□□□□ 0.51
PACS2-201ENST00000325438 BRD3OSQ6XYD6 125 aa18.24■□□□□ 0.51
PACS2-201ENST00000325438 TRAV12-2A0A075B6T6 113 aa18.24■□□□□ 0.51
PACS2-201ENST00000325438 SHISA2Q6UWI4 295 aa18.24■□□□□ 0.51
PACS2-201ENST00000325438 C15orf53Q8NAA6 179 aa18.24■□□□□ 0.51
PACS2-201ENST00000325438 FOXC1Q12948 553 aa18.24■□□□□ 0.51
PACS2-201ENST00000325438 C9orf139Q6ZV77 190 aa18.24■□□□□ 0.51
PACS2-201ENST00000325438 CFC1BP0CG36 223 aa18.23■□□□□ 0.51
PACS2-201ENST00000325438 CFC1P0CG37 223 aa18.23■□□□□ 0.51
PACS2-201ENST00000325438 TNFRSF13BO14836 293 aaPredicted RBP18.23■□□□□ 0.51
PACS2-201ENST00000325438 ZNF876PQ49A33 203 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 255.5 ms