RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 ATRXP46100 2492 aa19.12■□□□□ 0.65
SENP3-201ENST00000321337 TRBV7-1A0A0A6YYK4 115 aa19.12■□□□□ 0.65
SENP3-201ENST00000321337 CRYGDP07320 174 aa19.12■□□□□ 0.65
SENP3-201ENST00000321337 CENPVL3A0A0U1RRI6 287 aa19.11■□□□□ 0.65
SENP3-201ENST00000321337 LINC01619G3V211 115 aa19.11■□□□□ 0.65
SENP3-201ENST00000321337 IGHV3OR16-10A0A075B7F0 116 aa19.11■□□□□ 0.65
SENP3-201ENST00000321337 NDUFS8O00217 210 aa19.11■□□□□ 0.65
SENP3-201ENST00000321337 RNASE4P34096 147 aaKnown RBP19.11■□□□□ 0.65
SENP3-201ENST00000321337 SCGB1D4Q6XE38 83 aa19.11■□□□□ 0.65
SENP3-201ENST00000321337 COX6B1P14854 86 aa19.1■□□□□ 0.65
SENP3-201ENST00000321337 UBE2E1P51965 193 aa19.1■□□□□ 0.65
SENP3-201ENST00000321337 SPOCK3Q9BQ16 436 aa19.1■□□□□ 0.65
SENP3-201ENST00000321337 TSHBP01222 138 aa19.1■□□□□ 0.65
SENP3-201ENST00000321337 SCGB1A1P11684 91 aa19.1■□□□□ 0.65
SENP3-201ENST00000321337 APOMO95445 188 aa19.09■□□□□ 0.65
SENP3-201ENST00000321337 NFE4Q86UQ8 179 aa19.09■□□□□ 0.65
SENP3-201ENST00000321337 PTH2Q96A98 100 aa19.09■□□□□ 0.65
SENP3-201ENST00000321337 ASIPP42127 132 aa19.09■□□□□ 0.65
SENP3-201ENST00000321337 TSPAN13O95857 204 aa19.08■□□□□ 0.65
SENP3-201ENST00000321337 C5orf56Q8N8D9 126 aa19.08■□□□□ 0.65
SENP3-201ENST00000321337 JPT2Q9H910 190 aa19.08■□□□□ 0.65
SENP3-201ENST00000321337 LOC107984156A0A0G2JMH3 177 aa19.08■□□□□ 0.64
SENP3-201ENST00000321337 RNASE3P12724 160 aaKnown RBP19.08■□□□□ 0.64
SENP3-201ENST00000321337 SRSF9Q13242 221 aaKnown RBP eCLIP19.08■□□□□ 0.64
SENP3-201ENST00000321337 ARL17AQ8IVW1 177 aa19.08■□□□□ 0.64
SENP3-201ENST00000321337 MUC4Q99102 2169 aa19.08■□□□□ 0.64
SENP3-201ENST00000321337 TRAV21A0A0B4J279 112 aa19.07■□□□□ 0.64
SENP3-201ENST00000321337 C11orf86A6NJI1 115 aa19.07■□□□□ 0.64
SENP3-201ENST00000321337 PSMB2P49721 201 aa19.07■□□□□ 0.64
SENP3-201ENST00000321337 CFAP126Q5VTH2 177 aa19.07■□□□□ 0.64
SENP3-201ENST00000321337 C9orf139Q6ZV77 190 aa19.07■□□□□ 0.64
SENP3-201ENST00000321337 WFDC12Q8WWY7 111 aa19.07■□□□□ 0.64
SENP3-201ENST00000321337 K7ENP7 123 aa19.06■□□□□ 0.64
SENP3-201ENST00000321337 UBE2D1P51668 147 aa19.06■□□□□ 0.64
SENP3-201ENST00000321337 FHL3Q13643 280 aa19.06■□□□□ 0.64
SENP3-201ENST00000321337 ZNF418Q8TF45 676 aaPredicted RBP19.06■□□□□ 0.64
SENP3-201ENST00000321337 IGLV4-69A0A075B6H9 119 aa19.05■□□□□ 0.64
SENP3-201ENST00000321337 ARL3P36405 182 aa19.05■□□□□ 0.64
SENP3-201ENST00000321337 FOXC1Q12948 553 aa19.05■□□□□ 0.64
SENP3-201ENST00000321337 FOXI1Q12951 378 aa19.05■□□□□ 0.64
SENP3-201ENST00000321337 SOCS3O14543 225 aa19.05■□□□□ 0.64
SENP3-201ENST00000321337 RPL39P62891 51 aaKnown RBP19.05■□□□□ 0.64
SENP3-201ENST00000321337 Q6ZS46 218 aa19.05■□□□□ 0.64
SENP3-201ENST00000321337 OR10J6PQ8NGY7 276 aa19.05■□□□□ 0.64
SENP3-201ENST00000321337 LINC00477Q96M19 166 aa19.05■□□□□ 0.64
SENP3-201ENST00000321337 ATP6V0BQ99437 205 aa19.05■□□□□ 0.64
SENP3-201ENST00000321337 RPL11P62913 178 aaKnown RBP19.04■□□□□ 0.64
SENP3-201ENST00000321337 TSPEAR-AS2P59090 65 aa19.04■□□□□ 0.64
SENP3-201ENST00000321337 TRAV41A0A0B4J266 112 aa19.04■□□□□ 0.64
SENP3-201ENST00000321337 CD7P09564 240 aa19.04■□□□□ 0.64
SENP3-201ENST00000321337 SYT8Q8NBV8 401 aa19.04■□□□□ 0.64
SENP3-201ENST00000321337 LENEPQ9Y5L5 61 aa19.04■□□□□ 0.64
SENP3-201ENST00000321337 TGFAP01135 160 aa19.03■□□□□ 0.64
SENP3-201ENST00000321337 IGHV3-11P01762 117 aa19.03■□□□□ 0.64
SENP3-201ENST00000321337 DLX4Q92988 240 aaPredicted RBP19.03■□□□□ 0.64
SENP3-201ENST00000321337 TP53TG1Q9Y2A0 90 aa19.03■□□□□ 0.64
SENP3-201ENST00000321337 C1QTNF4Q9BXJ3 329 aa19.03■□□□□ 0.64
SENP3-201ENST00000321337 CDIP1Q9H305 208 aa19.03■□□□□ 0.64
SENP3-201ENST00000321337 COL6A6A6NMZ7 2263 aa19.02■□□□□ 0.64
SENP3-201ENST00000321337 SRD5A1P18405 259 aa19.02■□□□□ 0.64
SENP3-201ENST00000321337 LINC00315P59091 139 aa19.02■□□□□ 0.64
SENP3-201ENST00000321337 COL12A1Q99715 3063 aa19.02■□□□□ 0.63
SENP3-201ENST00000321337 NPFFO15130 113 aa19.02■□□□□ 0.63
SENP3-201ENST00000321337 A0A0J9YY99 117 aa19■□□□□ 0.63
SENP3-201ENST00000321337 EDN2P20800 178 aa19■□□□□ 0.63
SENP3-201ENST00000321337 KIF25-AS1Q9Y6Z4 181 aa19■□□□□ 0.63
SENP3-201ENST00000321337 MUC6Q6W4X9 2439 aa19■□□□□ 0.63
SENP3-201ENST00000321337 A0A087WWL8 130 aa19■□□□□ 0.63
SENP3-201ENST00000321337 FAM19A4Q96LR4 140 aa19■□□□□ 0.63
SENP3-201ENST00000321337 BPESC1Q9GZL8 116 aa19■□□□□ 0.63
SENP3-201ENST00000321337 C19orf54Q5BKX5 351 aa18.99■□□□□ 0.63
SENP3-201ENST00000321337 IGIPA6NJ69 53 aa18.99■□□□□ 0.63
SENP3-201ENST00000321337 OVOL1O14753 267 aa18.98■□□□□ 0.63
SENP3-201ENST00000321337 UBE2D3P61077 147 aa18.98■□□□□ 0.63
SENP3-201ENST00000321337 LMO4P61968 165 aa18.98■□□□□ 0.63
SENP3-201ENST00000321337 UBE2D2P62837 147 aa18.98■□□□□ 0.63
SENP3-201ENST00000321337 NDUFA11Q86Y39 141 aa18.98■□□□□ 0.63
SENP3-201ENST00000321337 CARD19Q96LW7 228 aa18.98■□□□□ 0.63
SENP3-201ENST00000321337 TMEM238LA0A1B0GVL6 79 aa18.97■□□□□ 0.63
SENP3-201ENST00000321337 A6NJY4 79 aa18.97■□□□□ 0.63
SENP3-201ENST00000321337 CKS1BP61024 79 aa18.97■□□□□ 0.63
SENP3-201ENST00000321337 IGF2RP11717 2491 aa18.97■□□□□ 0.63
SENP3-201ENST00000321337 TCL1BO95988 128 aa18.97■□□□□ 0.63
SENP3-201ENST00000321337 BRD3OSQ6XYD6 125 aa18.97■□□□□ 0.63
SENP3-201ENST00000321337 ZNRF2Q8NHG8 242 aa18.97■□□□□ 0.63
SENP3-201ENST00000321337 A0A1B0GV72 72 aa18.96■□□□□ 0.63
SENP3-201ENST00000321337 MT-ATP8P03928 68 aa18.96■□□□□ 0.63
SENP3-201ENST00000321337 SUMO4Q6EEV6 95 aa18.96■□□□□ 0.63
SENP3-201ENST00000321337 SPTAN1Q13813 2472 aaKnown RBP18.96■□□□□ 0.63
SENP3-201ENST00000321337 CFC1BP0CG36 223 aa18.95■□□□□ 0.62
SENP3-201ENST00000321337 CFC1P0CG37 223 aa18.95■□□□□ 0.62
SENP3-201ENST00000321337 UBTD1Q9HAC8 227 aa18.95■□□□□ 0.62
SENP3-201ENST00000321337 CLUHP3Q96NS8 147 aa18.95■□□□□ 0.62
SENP3-201ENST00000321337 OPRPNQ99935 248 aaPredicted RBP18.95■□□□□ 0.62
SENP3-201ENST00000321337 TMEM170BQ5T4T1 132 aa18.94■□□□□ 0.62
SENP3-201ENST00000321337 FAM223BA6NKX1 122 aa18.94■□□□□ 0.62
SENP3-201ENST00000321337 FAM223AQ8IWN6 122 aa18.94■□□□□ 0.62
SENP3-201ENST00000321337 POLR2KP53803 58 aaKnown RBP18.93■□□□□ 0.62
SENP3-201ENST00000321337 IGHV3-30P01768 117 aa18.93■□□□□ 0.62
SENP3-201ENST00000321337 IGHV3-30-5P0DP03 117 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms