RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 DPF1Q92782 380 aa7.34□□□□□ -1.24
RPGR-201ENST00000318842 KAAG1Q9UBP8 84 aa7.34□□□□□ -1.24
RPGR-201ENST00000318842 PRO0461Q9UI25 63 aa7.34□□□□□ -1.24
RPGR-201ENST00000318842 MXRA5Q9NR99 2828 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 PTPN13Q12923 2485 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 SONP18583 2426 aaKnown RBP7.33□□□□□ -1.24
RPGR-201ENST00000318842 PRM2P04554 102 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 CD3EP07766 207 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 CRIP2P52943 208 aaPredicted RBP7.33□□□□□ -1.24
RPGR-201ENST00000318842 TSPEAR-AS2P59090 65 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 NPC2P61916 151 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 RRN3P1Q2M238 152 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 C8orf86Q6ZUL3 223 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 ASCL5Q7RTU5 278 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 Q8N8P6 123 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 UBTD1Q9HAC8 227 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 BEX4Q9NWD9 120 aaPredicted RBP7.33□□□□□ -1.24
RPGR-201ENST00000318842 A0A1B0GW15 77 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 RNASE4P34096 147 aaKnown RBP7.33□□□□□ -1.24
RPGR-201ENST00000318842 XGP55808 180 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 FAM74A4Q5TZK3 123 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 PIP4P1Q86T03 277 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 CACNA1AO00555 2505 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 JMJD1CQ15652 2540 aa7.33□□□□□ -1.24
RPGR-201ENST00000318842 TRBV7-3A0A075B6L6 115 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 BUB3O43684 328 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 RNASE13Q5GAN3 156 aaKnown RBP7.32□□□□□ -1.24
RPGR-201ENST00000318842 TMEM78Q5T7P6 136 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 LYPD1Q8N2G4 141 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 RASL10AQ92737 203 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 NXT2Q9NPJ8 142 aaKnown RBP7.32□□□□□ -1.24
RPGR-201ENST00000318842 ABCA2Q9BZC7 2435 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 A0A087WX48 190 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 A0A1W2PPR1 153 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 SIVA1O15304 175 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 S100A4P26447 101 aaKnown RBP7.32□□□□□ -1.24
RPGR-201ENST00000318842 BRD3OSQ6XYD6 125 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 TM2D2Q9BX73 214 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 USP9XQ93008 2570 aaPredicted RBP7.32□□□□□ -1.24
RPGR-201ENST00000318842 TRBV7-9A0A0J9YWB2 115 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 Q6ZSV7 163 aa7.32□□□□□ -1.24
RPGR-201ENST00000318842 MYMXA0A1B0GTQ4 84 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 ELANEP08246 267 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 PRTN3P24158 256 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 TRPT1Q86TN4 253 aaKnown RBP7.31□□□□□ -1.24
RPGR-201ENST00000318842 C3orf56Q8N813 242 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 C8orf31Q8N9H6 132 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 ZFAND3Q9H8U3 227 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 SS18L2Q9UHA2 77 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 TNFRSF18Q9Y5U5 241 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 TRBV6-1A0A0K0K1D8 114 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 PDE6HQ13956 83 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 C2orf66Q6UXQ4 117 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 CDIP1Q9H305 208 aa7.31□□□□□ -1.24
RPGR-201ENST00000318842 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 HTN1P15515 57 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 LY6EQ16553 131 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 Q8N9W7 124 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 BAALCQ8WXS3 180 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 CARD19Q96LW7 228 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 RAB1BQ9H0U4 201 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 HOXA3O43365 443 aaPredicted RBP7.3□□□□□ -1.24
RPGR-201ENST00000318842 SPINK8P0C7L1 97 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 ZNF256Q9Y2P7 627 aaPredicted RBP7.3□□□□□ -1.24
RPGR-201ENST00000318842 CFAP46Q8IYW2 2715 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 ZFYVE26Q68DK2 2539 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 LINC01559Q495D7 138 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 TMEM170BQ5T4T1 132 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 SMIM2Q9BVW6 85 aa7.3□□□□□ -1.24
RPGR-201ENST00000318842 TRAV12-2A0A075B6T6 113 aa7.29□□□□□ -1.24
RPGR-201ENST00000318842 F5H697 171 aa7.29□□□□□ -1.24
RPGR-201ENST00000318842 TCL1BO95988 128 aa7.29□□□□□ -1.24
RPGR-201ENST00000318842 SPXQ9BT56 116 aa7.29□□□□□ -1.24
RPGR-201ENST00000318842 IGHV3-73A0A0B4J1V6 119 aa7.29□□□□□ -1.24
RPGR-201ENST00000318842 A8MZ25 164 aa7.29□□□□□ -1.24
RPGR-201ENST00000318842 RNF223E7ERA6 249 aa7.29□□□□□ -1.24
RPGR-201ENST00000318842 F8VRH5 84 aa7.29□□□□□ -1.24
RPGR-201ENST00000318842 RNF183Q96D59 192 aa7.29□□□□□ -1.24
RPGR-201ENST00000318842 SPATA25Q9BR10 227 aa7.29□□□□□ -1.24
RPGR-201ENST00000318842 ATP5LO75964 103 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 TSHBP01222 138 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 PF4V1P10720 104 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 SAA4P35542 130 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 SUMO2P61956 95 aaKnown RBP7.28□□□□□ -1.24
RPGR-201ENST00000318842 SRSF1Q07955 248 aaKnown RBP eCLIP7.28□□□□□ -1.24
RPGR-201ENST00000318842 IGFL3Q6UXB1 125 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 EPG5Q9HCE0 2579 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 HIGD1BQ9P298 99 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 FAM208BQ5VWN6 2430 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 B9A039 149 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 F8W1H4 67 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 CRYGDP07320 174 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 FOXI1Q12951 378 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 TP53TG1Q9Y2A0 90 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 PHLDA3Q9Y5J5 127 aa7.28□□□□□ -1.24
RPGR-201ENST00000318842 TRBV20-1A0A075B6N2 111 aa7.27□□□□□ -1.24
RPGR-201ENST00000318842 H7C1H1 209 aa7.27□□□□□ -1.24
RPGR-201ENST00000318842 EIF4EBP3O60516 100 aaPredicted RBP7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms