RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 IGHV3-38A0A0C4DH36 116 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 IGLC6P0CF74 106 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 DEFB131AP59861 70 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 NDUFA11Q86Y39 141 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 J3QKU1 62 aa10.36□□□□□ -0.75
PCDHGA3-201ENST00000253812 NDUFA7O95182 113 aa10.36□□□□□ -0.75
PCDHGA3-201ENST00000253812 TCL1BO95988 128 aa10.36□□□□□ -0.75
PCDHGA3-201ENST00000253812 ZNF833PQ6ZTB9 187 aa10.36□□□□□ -0.75
PCDHGA3-201ENST00000253812 C8orf31Q8N9H6 132 aa10.36□□□□□ -0.75
PCDHGA3-201ENST00000253812 A0A0J9YXV3 536 aa10.35□□□□□ -0.75
PCDHGA3-201ENST00000253812 CLPSL1A2RUU4 121 aa10.35□□□□□ -0.75
PCDHGA3-201ENST00000253812 RBAKDNA6NC62 111 aa10.35□□□□□ -0.75
PCDHGA3-201ENST00000253812 RNASE13Q5GAN3 156 aaKnown RBP10.35□□□□□ -0.75
PCDHGA3-201ENST00000253812 IGF2BP2-AS1Q96M15 143 aa10.35□□□□□ -0.75
PCDHGA3-201ENST00000253812 KLK9Q9UKQ9 250 aa10.35□□□□□ -0.75
PCDHGA3-201ENST00000253812 TRBV12-3P01733 135 aa10.35□□□□□ -0.75
PCDHGA3-201ENST00000253812 CXCL5P42830 114 aa10.35□□□□□ -0.75
PCDHGA3-201ENST00000253812 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
PCDHGA3-201ENST00000253812 NACAE9PAV3 2078 aa10.35□□□□□ -0.75
PCDHGA3-201ENST00000253812 TEX36Q5VZQ5 186 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 ZNF491Q8N8L2 437 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 ZNF524Q96C55 264 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 NAV3Q8IVL0 2385 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 CLEC2BQ92478 149 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 C20orf173Q96LM9 149 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 CSPG4Q6UVK1 2322 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 C1orf195Q5TG92 126 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 MPLKIPQ8TAP9 179 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 TM2D2Q9BX73 214 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 TRAV12-2A0A075B6T6 113 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 DEFB130BP0DP73 79 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 DEFB130AP0DP74 79 aa10.34□□□□□ -0.75
PCDHGA3-201ENST00000253812 Q6ZS92 163 aa10.33□□□□□ -0.76
PCDHGA3-201ENST00000253812 LRRC75A-AS1Q8N1F1 130 aa10.33□□□□□ -0.76
PCDHGA3-201ENST00000253812 AGPAT4-IT1Q9H0P7 198 aa10.33□□□□□ -0.76
PCDHGA3-201ENST00000253812 ZNRD1Q9P1U0 126 aa10.33□□□□□ -0.76
PCDHGA3-201ENST00000253812 CHKB-CPT1BH3BT56 60 aa10.33□□□□□ -0.76
PCDHGA3-201ENST00000253812 PDE6GP18545 87 aa10.33□□□□□ -0.76
PCDHGA3-201ENST00000253812 PLA2G2CQ5R387 149 aa10.33□□□□□ -0.76
PCDHGA3-201ENST00000253812 TRAV23DV6A0A075B6W5 121 aa10.33□□□□□ -0.76
PCDHGA3-201ENST00000253812 BUB3O43684 328 aa10.33□□□□□ -0.76
PCDHGA3-201ENST00000253812 ZNF134P52741 427 aa10.33□□□□□ -0.76
PCDHGA3-201ENST00000253812 TMEM61Q8N0U2 210 aa10.33□□□□□ -0.76
PCDHGA3-201ENST00000253812 H3BUX3 64 aa10.32□□□□□ -0.76
PCDHGA3-201ENST00000253812 LECT2O14960 151 aa10.32□□□□□ -0.76
PCDHGA3-201ENST00000253812 LINC00311Q8N616 119 aa10.32□□□□□ -0.76
PCDHGA3-201ENST00000253812 COX7B2Q8TF08 81 aa10.32□□□□□ -0.76
PCDHGA3-201ENST00000253812 MRPL53Q96EL3 112 aaKnown RBP10.32□□□□□ -0.76
PCDHGA3-201ENST00000253812 CTRLP40313 264 aa10.32□□□□□ -0.76
PCDHGA3-201ENST00000253812 IMUPQ9GZP8 106 aa10.32□□□□□ -0.76
PCDHGA3-201ENST00000253812 TECTAO75443 2155 aa10.32□□□□□ -0.76
PCDHGA3-201ENST00000253812 TRAV4A0A0B4J268 109 aa10.32□□□□□ -0.76
PCDHGA3-201ENST00000253812 C15orf65H3BRN8 121 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 RNF152Q8N8N0 203 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 PLXNA2O75051 1894 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 C11orf86A6NJI1 115 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 TIMM17AQ99595 171 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 M0QXV9 152 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 FRMD6-AS1P0C7T7 363 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 ZGRF1Q86YA3 2104 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 RNF166Q96A37 237 aaPredicted RBP10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 C17orf77Q96MU5 243 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 ETV2O00321 342 aaPredicted RBP10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 NDUFA4O00483 81 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 PROK2Q9HC23 129 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 MSRB1Q9NZV6 116 aa10.31□□□□□ -0.76
PCDHGA3-201ENST00000253812 TEX49A0A1B0GTD5 131 aa10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 RPL35AP18077 110 aaKnown RBP10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 XCL2Q9UBD3 114 aa10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 GTF3C1Q12789 2109 aa10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 C17orf58Q2M2W7 97 aa10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 C14orf132Q9NPU4 83 aa10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 ATP6V0E1O15342 81 aa10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 NDUFS5O43920 106 aa10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 LYPD2Q6UXB3 125 aa10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 A0A0G2JNJ9 132 aa10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 Q9UFV3 132 aa10.3□□□□□ -0.76
PCDHGA3-201ENST00000253812 MBD3L4A6NDZ8 208 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA3-201ENST00000253812 MBD3L3A6NE82 208 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA3-201ENST00000253812 MBD3L5A6NJ08 208 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA3-201ENST00000253812 IGLV3-1P01715 115 aa10.29□□□□□ -0.76
PCDHGA3-201ENST00000253812 ATP5EP2Q5VTU8 51 aa10.29□□□□□ -0.76
PCDHGA3-201ENST00000253812 MBD3L2Q8NHZ7 208 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA3-201ENST00000253812 TOMM6Q96B49 74 aa10.29□□□□□ -0.76
PCDHGA3-201ENST00000253812 TMEM256-PLSCR3K7ERE1 68 aa10.29□□□□□ -0.76
PCDHGA3-201ENST00000253812 GP9P14770 177 aa10.29□□□□□ -0.76
PCDHGA3-201ENST00000253812 ATP5EP56381 51 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA3-201ENST00000253812 FOXE3Q13461 319 aa10.29□□□□□ -0.76
PCDHGA3-201ENST00000253812 GNLYP22749 145 aa10.28□□□□□ -0.76
PCDHGA3-201ENST00000253812 Q6ZR03 302 aa10.28□□□□□ -0.76
PCDHGA3-201ENST00000253812 PLXND1Q9Y4D7 1925 aa10.28□□□□□ -0.76
PCDHGA3-201ENST00000253812 UPK3BQ9BT76 320 aa10.28□□□□□ -0.76
PCDHGA3-201ENST00000253812 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.28□□□□□ -0.76
PCDHGA3-201ENST00000253812 IGKV2-29A2NJV5 120 aaPredicted RBP10.28□□□□□ -0.76
PCDHGA3-201ENST00000253812 PRR30Q53SZ7 412 aaPredicted RBP10.28□□□□□ -0.76
PCDHGA3-201ENST00000253812 SERP2Q8N6R1 65 aa10.28□□□□□ -0.76
PCDHGA3-201ENST00000253812 GNRH2O43555 120 aa10.27□□□□□ -0.76
PCDHGA3-201ENST00000253812 GATA4P43694 442 aa10.27□□□□□ -0.76
PCDHGA3-201ENST00000253812 C16orf54Q6UWD8 224 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms