RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Smim19Q80ZU4 107 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gatad1Q920S3 266 aa11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Ascc3E9PZJ8 2198 aaKnown RBP11.85□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm45736A0A1B0GS18 427 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Olfr322Q5NCC8 327 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Klk10Q99M20 278 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Phf7Q9DAG9 307 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Tcf23Q9JLR5 209 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 PatjQ63ZW7 1834 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Trav7-4A0A075B6C1 113 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Ly6aP05533 134 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Igsf11P0C673 428 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Spint3Q3UW09 88 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Trav7d-4Q5R1H9 113 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Wdr82Q8BFQ4 313 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm10190Q8BSD7 107 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Rita1Q9D1H0 253 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm42957D6RFQ2 366 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Defa-rs2P17534 91 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm9881Q8BR56 211 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 PgpQ8CHP8 321 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Ighv5-9A0A075B5Q2 117 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Sumo2P61957 95 aaKnown RBP11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm10118Q8C8J5 116 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Trdv2-1A0A0G2JGB9 116 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Esp24A8R0V6 68 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Tmem88bQ3TYP4 173 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Psg17Q62056 475 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Poc1aQ8JZX3 405 aa11.84□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Adamts17E9Q4D1 1122 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Olfr1380Q7TQT5 311 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 9930021J03RikH3BKP8 2027 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 1700015F17RikD3YUK8 150 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Zpld1Q8BGZ8 415 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Rnf217D3YYI7 515 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 F11rO88792 300 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 NgfP01139 241 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Psmg4P0C7N9 123 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 GlulP15105 373 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Nhlrc3Q8CCH2 347 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Olfr498Q8VEW2 330 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Tcrg-V5A0A0G2JGV5 113 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Rpl36-ps4A0A140T8U4 117 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 H3BKT1 185 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Cd200r5Q8BTP3 270 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Tmem101Q91VP7 257 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Tmem170aQ9D342 144 aa11.83□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Ifitm7G3X9Z2 141 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Vamp8O70404 101 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Mst1P26928 716 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Znrf1Q91V17 227 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 PinlypQ9CQD7 212 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Fam89bQ9QUI1 189 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Shisa3Q3UPR0 238 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Olfr1258Q8VGN6 311 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Trbv1A0A0B4J1G7 116 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Pglyrp3A1A547 347 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Shisal1Q0VBP7 198 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 RetnQ99P87 114 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Carhsp1Q9CR86 148 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Tmem50aQ9CXL1 157 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Prss8Q9ESD1 342 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Igkv9-124A0A0G2JDR3 117 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Olfr918E9PVZ7 325 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Hist1h2bmP10854 126 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Shisa6Q3UH99 525 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Hist1h2bhQ64478 126 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Hist2h2bbQ64525 126 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Hist1h2bcQ6ZWY9 126 aaKnown RBP11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm10283Q8C3L5 117 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 HilpdaQ9JLS0 64 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 St6galnac3Q9WUV2 305 aa11.82□□□□□ -0.52
Col3a1-201ENSMUST00000087883 AsmtD3KU66 387 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 9830107B12RikD3Z5D6 160 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Lcn2P11672 200 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 C1qtnf4Q8R066 326 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 H2afb1Q9CQ70 111 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 H2al3Q9D4U4 128 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Ccl11P48298 97 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Fbln7Q501P1 440 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Cldn23Q9D7D7 296 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 EppinQ9DA01 134 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Zfpl1Q9DB43 310 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Ighv1-47A0A0A6YY41 117 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Olfr1337A2ACY8 315 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Spint5J3KMK8 105 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Cox19Q8K0C8 92 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Olfr1209Q3SXJ3 310 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 2210407C18RikQ6YI28 220 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Lrp10Q7TQH7 713 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Olfr477Q8VGI6 310 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 ChtopQ9CY57 249 aaKnown RBP11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Cxcl10P17515 98 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Loxl4Q924C6 757 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Prr15Q9D1T5 122 aa11.81□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm20825J3QM67 227 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Pla2g5P97391 137 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Ssty2Q149W4 227 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 Gm12888Q3UW77 119 aa11.8□□□□□ -0.52
Col3a1-201ENSMUST00000087883 AdipoqQ60994 247 aa11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms