RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 RanP62827 216 aaKnown RBP8.09□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Slc17a2Q5SZA1 478 aa8.09□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr875Q7TRE5 310 aa8.09□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Lhfpl1Q80SV1 220 aa8.09□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 1700001C19RikQ8K168 210 aa8.09□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gp2Q9D733 531 aa8.09□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gtsf1Q9DAN6 167 aa8.09□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Akap6E9Q9K8 2307 aa8.09□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ighv1-36A0A0A6YXT2 117 aa8.09□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Trav12d-1A0N8R0 115 aa8.09□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ca11O70354 328 aa8.09□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr484Q8VFD3 321 aa8.09□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Sfxn3Q91V61 321 aa8.09□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Susd2Q9DBX3 820 aa8.09□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ccl17F6R5P4 103 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm21244J3QK38 227 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm26965M0QWH4 86 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 P01787 123 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Egr1P08046 533 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tpsb2P21845 276 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Mex3bQ69Z36 601 aaKnown RBP8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 PaxxQ8K0Y7 205 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Chchd1Q9CQA6 118 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ceacam11Q9D0Z8 303 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Fkbp11Q9D1M7 201 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr972Q9EQA2 314 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tmem9bQ9JJR8 199 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ep300B2RWS6 2412 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tmem92B7ZWI3 162 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm15292L7N231 93 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Klrd1O54707 179 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 P18525 117 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Rab7aP51150 207 aaKnown RBP8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Atp5g2P56383 146 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Otx1P80205 355 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Prss44Q402U7 372 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Pom121l2Q5SW25 972 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Srsf7Q8BL97 267 aaKnown RBP8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ercc8Q8CFD5 397 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tppp3Q9CRB6 176 aaKnown RBP8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 TecrQ9CY27 308 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Med13lQ6JPI3 2207 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm28171A0A087WQ19 227 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Vmn1r224E9PWK2 298 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 1700003H04RikE9PXM2 192 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ren2P00796 401 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Neurog3P70661 214 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Mbd3l2Q3UXB0 228 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tmprss12Q3V0Q7 336 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 AY761185Q5ERI8 94 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Usf1Q61069 310 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Megf10Q6DIB5 1147 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Wdr83osQ6ZWX0 106 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr822Q8VFU1 312 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Rnase6Q9D244 153 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Rnd2Q9QYM5 227 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Bcl2l10Q9Z0F3 191 aa8.08□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Trav6-1A0A075B5Z8 112 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Foxl2O88470 375 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Il3raP26952 396 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 H2-DMb2Q31099 261 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Psg17Q62056 475 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Cdkn2aQ64364 169 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Cdcp2Q8BQH6 427 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Cbln3Q9JHG0 197 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Hs3st3b1Q9QZS6 390 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Slc25a5P51881 298 aaKnown RBP8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 UngP97931 306 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Q24JP4 165 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 G430049J08RikQ3TL09 166 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 EcscrQ3TZW0 214 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 SriQ6P069 198 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Znrd1Q791N7 123 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Nabp2Q8R2Y9 212 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 H2afb1Q9CQ70 111 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Mrps36Q9CQX8 102 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Pip4p2Q9CZX7 257 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Rnase4Q9JJH1 148 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm14124A2AU83 715 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Cbln4Q8BME9 198 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Rnf7Q9WTZ1 113 aa8.07□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 1810011H11RikE9PVZ2 95 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Phxr2P15972 65 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tcl1b2P56841 117 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr1258Q8VGN6 311 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Nup37Q9CWU9 326 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ly96Q9JHF9 160 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ahctf1Q8CJF7 2243 aaKnown RBP8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Scgb2a2J3KMP9 96 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr898L7N1Z5 316 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Cnih1O35372 144 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Cited1P97769 203 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Shisal1Q0VBP7 198 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Trdv4Q5R1A3 115 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tmem167bQ80X45 74 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr523Q8VFE7 317 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Bpifa5Q9CQX3 270 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Urm1Q9D2P4 101 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 PigpQ9JHG1 132 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ighv8-2A0A0A6YW58 119 aa8.06□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms