RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Rnf141Q99MB7 230 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Vmn1r50Q9EP51 310 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Mettl9Q9EPL4 318 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 LrbaQ9ESE1 2856 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ighv14-4A0A0A6YVR1 117 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Mgst2A2RST1 147 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm20517G3UVU6 152 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Brs3O54798 399 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Fgf7P36363 194 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Dynlt3P56387 116 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 AgaQ64191 346 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm9958Q8C9U4 106 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Fam24aQ8CF27 98 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Poc1aQ8JZX3 405 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 FuomQ8R2K1 153 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr1202Q8VF98 309 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr1413Q8VGU3 323 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gins1Q9CZ15 196 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Angptl4Q9Z1P8 410 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm8677K9J7G9 307 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr191L7N1Z8 309 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 AipO08915 330 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cd79bP15530 228 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Lgals3P16110 264 aaKnown RBP6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Dhrs2Q149L0 282 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Rtl4Q3URY0 304 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Vwc2lQ505H4 222 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Sft2d1Q5SSN7 159 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr1434Q7TQR9 312 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr1178Q7TR20 323 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr411Q7TRW8 315 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm26558Q8BLW8 286 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 4922502D21RikQ8C634 189 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm9949Q8C9F4 104 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr1102Q8VES2 324 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr368Q8VF22 327 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr786Q8VFH8 312 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Dok5Q91ZM9 306 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Slc31a2Q9CPU9 143 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Q9CQT9 129 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gng10Q9CXP8 68 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Sult1b1Q9QWG7 299 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ighv7-3A0A075B5R2 120 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Aadacl4B1AVU5 407 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm9047B9EJX3 177 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Nkx6-2D3Z4R4 277 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Inafm1E9PV59 130 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cep192E9Q4Y4 2514 aaKnown RBP6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 P01726 129 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Iglc2P01844 104 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Hist1h1bP43276 223 aaKnown RBP6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cox7a2P48771 83 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Atpaf1Q811I0 324 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Fam216bQ8CC14 138 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cds2Q99L43 444 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Plekha2Q9ERS5 425 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gng13Q9JMF3 67 aa6.98□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm37388A0A0A6YY46 143 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr364-ps1A0A140T8Q2 307 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ifitm7G3X9Z2 141 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cpne2P59108 548 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Rab11aP62492 216 aaKnown RBP6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Tmem18Q3TUD9 140 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Trav8d-1Q5R1H8 112 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Zfp459Q8BZ17 267 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 TdhQ8K3F7 373 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 4933414I15RikQ9D4D5 133 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ankrd17Q99NH0 2603 aaKnown RBP6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ighv1-20A0A0A6YX66 117 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Trbv5A0A0B4J1G9 113 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 FmodP50608 376 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ube2e1P52482 193 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Rab4aP56371 218 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Atp5g2P56383 146 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Dnajc30P59041 219 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Spint3Q3UW09 88 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 H2-M10.6Q85ZW5 330 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Mpped1Q91ZG2 326 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Sval2Q99N75 144 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Tmem208Q9CR96 173 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Q9DAL9 119 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 C2cd3Q52KB6 2323 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ighv8-9A0A0G2JET1 119 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm21244J3QK38 227 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Vmn1r78K7N608 313 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 ErhP84089 104 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Lhfpl1Q80SV1 220 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Nanos1Q80WY3 267 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm4763Q8CFJ5 196 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 B3gnt9Q8VI16 399 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ms4a6cQ99N08 217 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Smim8Q9CQQ0 97 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gins3Q9CY94 216 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Pygo1Q9D0P5 417 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Fkbp11Q9D1M7 201 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Col13a1Q9R1N9 751 aa6.97□□□□□ -1.29
Trim39-201ENSMUST00000042717 Syngr2O55101 224 aa6.96□□□□□ -1.29
Trim39-201ENSMUST00000042717 P01788 123 aa6.96□□□□□ -1.29
Trim39-201ENSMUST00000042717 Isoc2aP85094 206 aa6.96□□□□□ -1.29
Trim39-201ENSMUST00000042717 Defb30Q30KN4 75 aa6.96□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms