RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Vmn1r224E9PWK2 298 aa9.48□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Henmt1Q8CAE2 395 aa9.48□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Rer1Q9CQU3 196 aaKnown RBP9.48□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Borcs7Q9CRC6 105 aa9.48□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Fam208bQ5DTT3 2382 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Gpr27O54897 379 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 TymsP07607 307 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 P18525 117 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Mpv17P19258 176 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Timp3P39876 211 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Sult1a1P52840 291 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Trav8d-2Q5R1B6 112 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Znf260Q62513 407 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Stac2Q8R1B0 408 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Lamtor5Q9D1L9 91 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Arfgef3Q3UGY8 2170 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Ighv7-2A0A0A6YX91 119 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Olfr779E9PUS9 130 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Gm10203F6QJ09 66 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Bmp5P49003 452 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Arrdc5Q497K5 325 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Q8C3M9 231 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Olfr303Q8VFP0 319 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Olfr513Q8VFZ3 309 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Olfr1258Q8VGN6 311 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Znrf1Q91V17 227 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Wdfy3Q6VNB8 3508 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Igkv4-51A0N8I8 119 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Gm12169F2Z474 250 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Degs1O09005 323 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Rab33bO35963 229 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Cd96Q3U0X8 602 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Cdkn2aQ64364 169 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Mbnl2Q8C181 373 aaKnown RBP9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Cbln3Q9JHG0 197 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Zfp36P22893 319 aaKnown RBP9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 GrnP28798 589 aaKnown RBP9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Zic3Q62521 466 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Harbi1Q8BR93 349 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Plxnb1Q8CJH3 2119 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Cisd1Q91WS0 108 aaKnown RBP9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Gpr132Q9Z282 382 aa9.47□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Bcat2O35855 393 aa9.46□□□□□ -0.89
Topbp1-201ENSMUST00000035164 F7P70375 446 aa9.46□□□□□ -0.89
Topbp1-201ENSMUST00000035164 CxadrP97792 365 aa9.46□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Mnx1Q9QZW9 404 aa9.46□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Lgals1P16045 135 aaKnown RBP9.46□□□□□ -0.89
Topbp1-201ENSMUST00000035164 FasP25446 327 aa9.46□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Trav15-1-dv6-1Q5R1D2 117 aa9.46□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Scnm1Q8K136 229 aa9.46□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Cdpf1Q8R3A2 119 aa9.46□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Olfr1183Q8VFF8 303 aa9.46□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Igkv6-14A0A140T8P1 115 aa9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Lnp1A0A1B0GSK3 178 aa9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm765B2RVL9 189 aa9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Tnfsf11O35235 316 aa9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm12253Q5NC48 229 aa9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ppp1r14aQ91VC7 147 aa9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Rab29Q91YQ1 204 aa9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr920E9Q413 310 aa9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ctsll3Q3ULP7 331 aa9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Fbxl7Q5BJ29 491 aa9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr358Q7TRY5 330 aa9.46□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Rai1Q61818 1889 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Thap8E9Q695 213 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr715bE9Q725 315 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Asphd1Q2TA57 360 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Wdr83osQ6ZWX0 106 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Smim12Q78RX3 92 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Col6a3E9PWQ3 3284 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Frrs1lB1AXV0 293 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Gm5741B2RVA4 72 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 AponG3X9D6 251 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Fgfbp1O70514 251 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Lrfn3Q8BLY3 626 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr470Q8VF65 314 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr523Q8VFE7 317 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Hoxa1P09022 331 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Ssty1P13675 232 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Q0VG49 157 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Scgb2b24Q7M747 112 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 PirtQ8BFY0 135 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Mob3bQ8VE04 216 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Igkv4-50A0A0B4J1J0 117 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 B2mP01887 119 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Cxcl10P17515 98 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 MymxQ2Q5T5 84 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Tnfsf18Q7TS55 173 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr1272Q8VGN8 308 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Tm2d1Q99MB3 208 aa9.45□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Rpl8P62918 257 aaKnown RBP9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Atp6v0cP63082 155 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Vmn1r70Q8R254 298 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Olfr484Q8VFD3 321 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 4931428L18RikQ9D4S9 127 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Slc25a5P51881 298 aaKnown RBP9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Tmprss12Q3V0Q7 336 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 SelplgQ62170 397 aa9.44□□□□□ -0.9
Topbp1-201ENSMUST00000035164 Fbxo46Q8BG80 603 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms