RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 FetubQ9QXC1 388 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm27027S4R1M6 97 aa12.31□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm12169F2Z474 250 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 CckarO08786 436 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Dynlt3P56387 116 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Rpl31P62900 125 aaKnown RBP12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Sf3a2Q62203 475 aaKnown RBP12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Znf474Q6V5K9 347 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Foxn4Q8K3Q3 521 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Pcgf1Q8R023 259 aaKnown RBP12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Ighv5-12-4A0A0A6YWG4 117 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Wfdc11A2A5H7 82 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Esp6A8R0U0 136 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 AdipoqQ60994 247 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Fxyd3Q61835 88 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Pth2Q91W27 100 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Q9CQ90 155 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 CadB2RQC6 2225 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Mettl23A2AA28 253 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Vmn1r78K7N608 313 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Il3raP26952 396 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Crebl2Q32M00 123 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Smim7Q5RKS2 75 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Olfr1371Q7TQT7 311 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 PirtQ8BFY0 135 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Saxo2Q8BQB6 394 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Msrb3Q8BU85 253 aa12.3□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Igkv1-132A0A0B4J1H9 120 aa12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm10020E9QAZ2 204 aa12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Fosl1P48755 273 aa12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Cnn1Q08091 297 aaKnown RBP12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 2810408A11RikQ6NSU2 435 aa12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Ms4a6bQ99N09 244 aa12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Rpl15Q9CZM2 204 aaKnown RBP12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Ighv6-3A0A075B5T2 118 aa12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Olfr1154L7MU57 310 aa12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gata2O09100 480 aa12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 P01789 122 aa12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Rnf224Q3UIW8 156 aa12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm10334Q792Y8 246 aa12.29□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Znrd1Q791N7 123 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Olfr1246Q7TQZ6 314 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 TncQ80YX1 2110 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Trav6n-5A0A075B621 112 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 TracA0A075B662 137 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Trav6-5A0A075B6B5 112 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm42420A0A0J9YUQ2 99 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Fndc10A2A9Q0 223 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Olfr191L7N1Z8 309 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 P04942 107 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Spam1P48794 512 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Olfr1457Q8VFK3 317 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Trbv1A0A0B4J1G7 116 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Gm44501A8R0T9 150 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Tm4sf19E9Q9H8 206 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Edn1P22387 202 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Tpsab1Q02844 273 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Spink11Q09TK7 88 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Smim6Q3U0I6 56 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Trav6d-4Q5R1I0 115 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Tmem190Q9D2E9 166 aa12.28□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Trbv19A0A0B4J1H4 117 aa12.27□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 AU041133A0A0J9YVH3 498 aa12.27□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 H2al1jA2BFR3 109 aa12.27□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Tnfaip6O08859 275 aa12.27□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Cd59aO55186 123 aa12.27□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 P04212 136 aa12.27□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Stfa1P35175 97 aa12.27□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 H2al1nQ497L1 109 aa12.27□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Slurp1Q9Z0K7 110 aa12.27□□□□□ -0.44
Nkx3-1-201ENSMUST00000022646 Ccl2P10148 148 aa12.27□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Gimap1P70224 277 aa12.27□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Cd96Q3U0X8 602 aa12.27□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Q3U1D9 316 aa12.27□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 CrygcQ61597 174 aa12.27□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Ifna12Q80SS5 189 aa12.27□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Olfr1462Q8VFW3 307 aa12.27□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Gpr35Q9ES90 307 aa12.27□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Nubp1Q9R060 320 aa12.27□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Gvin1Q80SU7 2427 aa12.27□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Trbv3A0A0A6YYE2 117 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Il31Q6EAL8 163 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Tmem204Q7TQI0 226 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Smim19Q80ZU4 107 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Megf9Q8BH27 600 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Fbxw26Q8BI58 466 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Fcrl6A1YIY0 268 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Gm10309Q8C648 119 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Olfr492Q8VFD1 314 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Olfr770Q8VGC2 311 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Igkv1-131A0A140T8M8 120 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Gm3285A0A1W2P7U0 201 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Olfr1179A2AUS6 307 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Ptbp1P17225 527 aaKnown RBP12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 P18529 117 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Rab24P35290 203 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 KncnQ307W7 124 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Prss44Q402U7 372 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Olfr1472Q7TQQ9 314 aa12.26□□□□□ -0.45
Nkx3-1-201ENSMUST00000022646 Fhl4Q8CDC8 279 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 78.7 ms