RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ube2zQ3UE37 356 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Srsf7Q8BL97 267 aaKnown RBP7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Mrpl27Q99N92 148 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Il17bQ9QXT6 180 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Ighv5-17A0A075B5R1 117 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Olfr747E9PXH6 313 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Cacng7P62956 275 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Gm1673Q3UR78 90 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Prss33Q80WM7 277 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Sec11aQ9R0P6 179 aa7.78□□□□□ -1.16
Ccdc47-201ENSMUST00000002043 Ecm29Q6PDI5 1840 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 D930048N14RikA2AA67 225 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm4788E9Q8B5 879 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Il9P15247 144 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Olfr1382Q7TQT3 311 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Olfr1381Q7TQT4 311 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Zpld1Q8BGZ8 415 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Olfr223Q8VF69 319 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ormdl2Q9CQZ0 153 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Myoz1Q9JK37 296 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ntn3Q9R1A3 580 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm45785A0A1B0GT05 94 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Esp24A8R0V6 68 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Scgb1b2O35176 93 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm20854Q62461 227 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Rasl11aQ6IMB1 242 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Olfr263Q7TQT8 317 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Prss58Q8BW11 241 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Higd1bQ99JY6 98 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Vgll1Q99NC0 307 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ndufb8Q9D6J5 186 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Tcrg-V4A0A0B4J1J8 138 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ighv1-67A0A0G2JFN9 117 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm20458E9PXJ7 78 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 E430018J23RikE9PZQ8 461 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm21976J3QNN2 249 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Fgf5P15656 264 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Atp6v0cP63082 155 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Nhlrc4Q3UP44 136 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Fbln7Q501P1 440 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Lipt2Q9D009 231 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 DnlzQ9D113 177 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Cryba2Q9JJV1 197 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Tcf23Q9JLR5 209 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 PatjQ63ZW7 1834 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Igsf23B2RTN2 239 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 P18530 117 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Rbfox3Q8BIF2 374 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Tmem177Q8BPE4 311 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Olfr476Q8VGI4 310 aa7.77□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Dock11A2AF47 2073 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Rnf5O35445 180 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 P18533 117 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Pax8Q00288 457 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ypel2Q65Z95 119 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ankrd55Q8BLD6 626 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Mbnl2Q8C181 373 aaKnown RBP7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 GgactQ923B0 149 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ypel1Q9ESC7 118 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Mixl1Q9WUI0 231 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Trdv4Q5R1A3 115 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Morn3Q8C5T4 241 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Spcs1Q9D958 161 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Cbln1Q9R171 193 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Nup205A0A0J9YUD5 2061 aaKnown RBP7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Btaf1E9QAE3 1848 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Arfgef1G3X9K3 1846 aaKnown RBP7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Trav6-1A0A075B5Z8 112 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Trav16nA0A075B634 117 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Irf2bp2E9Q1P8 570 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 P01801 115 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Tmem91Q8C581 172 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Prr23a3Q9CWP9 254 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Chd3B1AR17 2055 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm17732E9Q5I2 61 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Defa-rs12P50716 91 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm10447Q3UQ92 135 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Defa20Q45VN2 95 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ss18Q62280 418 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Wdr82Q8BFQ4 313 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Eda2rQ8BX35 297 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Cdk2ap2Q9CPY4 127 aa7.76□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Olfr1369-ps1A0A140T8K7 317 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm933J3QPC1 141 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ren2P00796 401 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Hoxd11P23813 323 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 GrhprQ91Z53 328 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 St6galnac3Q9WUV2 305 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ighv5-4A0A075B5P9 117 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Gm21882J3QN86 361 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Tmem100Q9CQG9 134 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Wdr31Q9JHB4 367 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Ccl28Q9JIL2 130 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 H2al2bA9Z055 111 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Nabp1Q8BGW5 198 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 eef1akmt3D3YWP0 232 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 PpoxP51175 477 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Il12rb1Q60837 738 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Anapc13Q8R034 74 aa7.75□□□□□ -1.17
Ccdc47-201ENSMUST00000002043 Zdhhc16Q9ESG8 361 aa7.75□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms