RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 GATCO43716 136 aaKnown RBP12.71□□□□□ -0.37
PHGDH-230ENST00000641927 ANXA2RQ3ZCQ2 193 aa12.71□□□□□ -0.37
PHGDH-230ENST00000641927 FAM231DQ6ZW35 169 aa12.71□□□□□ -0.37
PHGDH-230ENST00000641927 OR2D3Q8NGH3 330 aa12.71□□□□□ -0.37
PHGDH-230ENST00000641927 OSTCQ9NRP0 149 aa12.71□□□□□ -0.37
PHGDH-230ENST00000641927 IGHV1OR15-1A0A075B7D0 117 aa12.7□□□□□ -0.38
PHGDH-230ENST00000641927 IGKV3D-20A0A0C4DH25 116 aa12.7□□□□□ -0.38
PHGDH-230ENST00000641927 CBY3A6NI87 242 aa12.7□□□□□ -0.38
PHGDH-230ENST00000641927 MT-ND4LP03901 98 aa12.7□□□□□ -0.38
PHGDH-230ENST00000641927 DEFA6Q01524 100 aa12.7□□□□□ -0.38
PHGDH-230ENST00000641927 RNF212Q495C1 297 aa12.7□□□□□ -0.38
PHGDH-230ENST00000641927 RCHY1Q96PM5 261 aa12.7□□□□□ -0.38
PHGDH-230ENST00000641927 PYGO2Q9BRQ0 406 aa12.7□□□□□ -0.38
PHGDH-230ENST00000641927 RPP21Q9H633 154 aaKnown RBP12.7□□□□□ -0.38
PHGDH-230ENST00000641927 PRM2P04554 102 aa12.7□□□□□ -0.38
PHGDH-230ENST00000641927 Q6ZWC4 215 aa12.7□□□□□ -0.38
PHGDH-230ENST00000641927 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
PHGDH-230ENST00000641927 RHEBQ15382 184 aa12.69□□□□□ -0.38
PHGDH-230ENST00000641927 LINC01559Q495D7 138 aa12.69□□□□□ -0.38
PHGDH-230ENST00000641927 RPS10P5Q9NQ39 176 aa12.69□□□□□ -0.38
PHGDH-230ENST00000641927 C7orf77A4D0Y5 90 aa12.68□□□□□ -0.38
PHGDH-230ENST00000641927 GRIFINA4D1Z8 144 aa12.68□□□□□ -0.38
PHGDH-230ENST00000641927 PPP1R2P9O14990 202 aa12.68□□□□□ -0.38
PHGDH-230ENST00000641927 GNRH2O43555 120 aa12.68□□□□□ -0.38
PHGDH-230ENST00000641927 ZNF705AQ6ZN79 300 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-230ENST00000641927 SBSPONQ8IVN8 264 aa12.68□□□□□ -0.38
PHGDH-230ENST00000641927 TP53TG3Q9ULZ0 132 aa12.68□□□□□ -0.38
PHGDH-230ENST00000641927 GZMBP10144 247 aa12.67□□□□□ -0.38
PHGDH-230ENST00000641927 ANAPC16Q96DE5 110 aa12.67□□□□□ -0.38
PHGDH-230ENST00000641927 V9GYV3 84 aa12.67□□□□□ -0.38
PHGDH-230ENST00000641927 XKRY2A2RUG3 117 aa12.67□□□□□ -0.38
PHGDH-230ENST00000641927 SPRY2O43597 315 aa12.67□□□□□ -0.38
PHGDH-230ENST00000641927 TYMSP04818 313 aa12.67□□□□□ -0.38
PHGDH-230ENST00000641927 TDRG1Q3Y452 100 aa12.67□□□□□ -0.38
PHGDH-230ENST00000641927 RNF183Q96D59 192 aa12.67□□□□□ -0.38
PHGDH-230ENST00000641927 TRGV11A0A075B6L2 103 aa12.66□□□□□ -0.38
PHGDH-230ENST00000641927 S100A4P26447 101 aaKnown RBP12.66□□□□□ -0.38
PHGDH-230ENST00000641927 RPS20P60866 119 aaKnown RBP12.66□□□□□ -0.38
PHGDH-230ENST00000641927 OR11H2Q8NH07 326 aa12.66□□□□□ -0.38
PHGDH-230ENST00000641927 TPPP3Q9BW30 176 aa12.66□□□□□ -0.38
PHGDH-230ENST00000641927 RETNQ9HD89 108 aa12.66□□□□□ -0.38
PHGDH-230ENST00000641927 TIMM8BQ9Y5J9 83 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-230ENST00000641927 A8MWL6 223 aa12.65□□□□□ -0.38
PHGDH-230ENST00000641927 AZU1P20160 251 aa12.65□□□□□ -0.38
PHGDH-230ENST00000641927 ASIPP42127 132 aa12.65□□□□□ -0.38
PHGDH-230ENST00000641927 RRN3P1Q2M238 152 aa12.65□□□□□ -0.38
PHGDH-230ENST00000641927 CT83Q5H943 113 aa12.64□□□□□ -0.39
PHGDH-230ENST00000641927 LINC00467Q9BRT7 94 aa12.64□□□□□ -0.39
PHGDH-230ENST00000641927 CTDSP1Q9GZU7 261 aa12.64□□□□□ -0.39
PHGDH-230ENST00000641927 NBEAL2Q6ZNJ1 2754 aa12.64□□□□□ -0.39
PHGDH-230ENST00000641927 A0A087WWC5 75 aa12.64□□□□□ -0.39
PHGDH-230ENST00000641927 TCL1AP56279 114 aa12.64□□□□□ -0.39
PHGDH-230ENST00000641927 MDFICQ9P1T7 246 aa12.64□□□□□ -0.39
PHGDH-230ENST00000641927 X6R8D5 127 aa12.64□□□□□ -0.39
PHGDH-230ENST00000641927 IGHV3-16A0A0C4DH30 117 aa12.63□□□□□ -0.39
PHGDH-230ENST00000641927 H3BVH4 76 aa12.63□□□□□ -0.39
PHGDH-230ENST00000641927 TSKUQ8WUA8 353 aa12.63□□□□□ -0.39
PHGDH-230ENST00000641927 OVOL2Q9BRP0 275 aa12.63□□□□□ -0.39
PHGDH-230ENST00000641927 TP53TG1Q9Y2A0 90 aa12.63□□□□□ -0.39
PHGDH-230ENST00000641927 TMEM88Q6PEY1 159 aa12.62□□□□□ -0.39
PHGDH-230ENST00000641927 ZNF575Q86XF7 245 aa12.62□□□□□ -0.39
PHGDH-230ENST00000641927 TMEM263Q8WUH6 116 aaKnown RBP12.62□□□□□ -0.39
PHGDH-230ENST00000641927 NEU1Q99519 415 aa12.62□□□□□ -0.39
PHGDH-230ENST00000641927 SMIM9A6NGZ8 99 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 ARMS2P0C7Q2 107 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 EMP1P54849 157 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 SSTP61278 116 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 ZNF415Q09FC8 603 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 CBLN2Q8IUK8 224 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 GTSF1Q8WW33 167 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 C16orf74Q96GX8 76 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 SPATA25Q9BR10 227 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 GSN-AS1Q9NRJ2 163 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 SMCO4Q9NRQ5 59 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 IL36BQ9NZH7 164 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 HIGD1CA8MV81 97 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 CXCL1P09341 107 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 FER1L6-AS1Q8NA97 138 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 RNASE8Q8TDE3 154 aaKnown RBP12.61□□□□□ -0.39
PHGDH-230ENST00000641927 GFRA4Q9GZZ7 299 aa12.61□□□□□ -0.39
PHGDH-230ENST00000641927 SNURFLB1AK76 121 aa12.6□□□□□ -0.39
PHGDH-230ENST00000641927 RNASE3P12724 160 aaKnown RBP12.6□□□□□ -0.39
PHGDH-230ENST00000641927 PGLYRP4Q96LB8 373 aa12.6□□□□□ -0.39
PHGDH-230ENST00000641927 B9D2Q9BPU9 175 aa12.6□□□□□ -0.39
PHGDH-230ENST00000641927 TM2D3Q9BRN9 247 aa12.6□□□□□ -0.39
PHGDH-230ENST00000641927 ZMAT4Q9H898 229 aa12.6□□□□□ -0.39
PHGDH-230ENST00000641927 TMEM242Q9NWH2 141 aa12.6□□□□□ -0.39
PHGDH-230ENST00000641927 MEGF8Q7Z7M0 2845 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 IGHV4-28A0A0C4DH34 117 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 MUC21A0A0G2JKD1 596 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 MUC21A0A140T8X8 626 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 A0A1W2PPQ1 181 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 SMIM27A0A1W2PRY6 76 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 DEFB4AO15263 64 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 MIFP14174 115 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 FAM3BP58499 235 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-230ENST00000641927 ZNF493Q6ZR52 646 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 C11orf72Q8NBR9 251 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 NAT8BQ9UHF3 227 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 PHLDA3Q9Y5J5 127 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms