RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 CXCL1P09341 107 aa9.78□□□□□ -0.84
LINC00643-207ENST00000637212 ATRAIDQ6UW56 229 aa9.78□□□□□ -0.84
LINC00643-207ENST00000637212 CSNK1G2-AS1Q8NCQ2 148 aa9.78□□□□□ -0.84
LINC00643-207ENST00000637212 GFRA4Q9GZZ7 299 aa9.78□□□□□ -0.84
LINC00643-207ENST00000637212 C11orf21Q9P2W6 132 aa9.78□□□□□ -0.84
LINC00643-207ENST00000637212 CMYA5Q8N3K9 4069 aa9.77□□□□□ -0.84
LINC00643-207ENST00000637212 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.85
LINC00643-207ENST00000637212 CA1P00915 261 aaPredicted RBP9.77□□□□□ -0.85
LINC00643-207ENST00000637212 FOXA3P55318 350 aaPredicted RBP9.77□□□□□ -0.85
LINC00643-207ENST00000637212 FAM159AQ6UWV7 190 aa9.77□□□□□ -0.85
LINC00643-207ENST00000637212 TSKUQ8WUA8 353 aa9.77□□□□□ -0.85
LINC00643-207ENST00000637212 PYGO2Q9BRQ0 406 aa9.77□□□□□ -0.85
LINC00643-207ENST00000637212 GOLT1BQ9Y3E0 138 aa9.77□□□□□ -0.85
LINC00643-207ENST00000637212 PKD1L1Q8TDX9 2849 aa9.76□□□□□ -0.85
LINC00643-207ENST00000637212 IGHV1OR15-1A0A075B7D0 117 aa9.76□□□□□ -0.85
LINC00643-207ENST00000637212 SMIM27A0A1W2PRY6 76 aa9.76□□□□□ -0.85
LINC00643-207ENST00000637212 ANXA2RQ3ZCQ2 193 aa9.76□□□□□ -0.85
LINC00643-207ENST00000637212 DNLZQ5SXM8 178 aa9.76□□□□□ -0.85
LINC00643-207ENST00000637212 Q6ZQT7 251 aa9.76□□□□□ -0.85
LINC00643-207ENST00000637212 ZNF575Q86XF7 245 aa9.76□□□□□ -0.85
LINC00643-207ENST00000637212 C1orf158Q8N1D5 194 aa9.76□□□□□ -0.85
LINC00643-207ENST00000637212 LINC01587Q99440 93 aa9.76□□□□□ -0.85
LINC00643-207ENST00000637212 IL36BQ9NZH7 164 aa9.76□□□□□ -0.85
LINC00643-207ENST00000637212 A0A1W2PPQ1 181 aa9.75□□□□□ -0.85
LINC00643-207ENST00000637212 Q6ZWC4 215 aa9.75□□□□□ -0.85
LINC00643-207ENST00000637212 SMCO4Q9NRQ5 59 aa9.75□□□□□ -0.85
LINC00643-207ENST00000637212 TP53TG3Q9ULZ0 132 aa9.75□□□□□ -0.85
LINC00643-207ENST00000637212 RBMY1A1P0DJD3 496 aaKnown RBP9.74□□□□□ -0.85
LINC00643-207ENST00000637212 RBMY1CP0DJD4 496 aa9.74□□□□□ -0.85
LINC00643-207ENST00000637212 RBMY1FQ15415 496 aaKnown RBP9.74□□□□□ -0.85
LINC00643-207ENST00000637212 ZNF705AQ6ZN79 300 aaPredicted RBP9.74□□□□□ -0.85
LINC00643-207ENST00000637212 TMEM208Q9BTX3 173 aa9.74□□□□□ -0.85
LINC00643-207ENST00000637212 NAGKQ9UJ70 344 aa9.74□□□□□ -0.85
LINC00643-207ENST00000637212 TRGV11A0A075B6L2 103 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 SMIM9A6NGZ8 99 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 F2Z2F3 143 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 K7EIL1 84 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 GNRH2O43555 120 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 MED14OSP0DP75 135 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 S100PP25815 95 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 RPL19P84098 196 aaKnown RBP9.73□□□□□ -0.85
LINC00643-207ENST00000637212 MUC21Q5SSG8 566 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 WDR73Q6P4I2 378 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 KCNIP4Q6PIL6 250 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 NEU1Q99519 415 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 NAT8BQ9UHF3 227 aa9.73□□□□□ -0.85
LINC00643-207ENST00000637212 TRAV9-1A0A075B6T8 112 aa9.72□□□□□ -0.85
LINC00643-207ENST00000637212 TMSB15BA0A087X1C1 80 aa9.72□□□□□ -0.85
LINC00643-207ENST00000637212 CBY3A6NI87 242 aa9.72□□□□□ -0.85
LINC00643-207ENST00000637212 FRMD6-AS1P0C7T7 363 aa9.72□□□□□ -0.85
LINC00643-207ENST00000637212 ASIPP42127 132 aa9.72□□□□□ -0.85
LINC00643-207ENST00000637212 BTF3L4Q96K17 158 aa9.72□□□□□ -0.85
LINC00643-207ENST00000637212 SSBP4Q9BWG4 385 aaPredicted RBP9.72□□□□□ -0.85
LINC00643-207ENST00000637212 IGHV3-16A0A0C4DH30 117 aa9.71□□□□□ -0.86
LINC00643-207ENST00000637212 GRIFINA4D1Z8 144 aa9.71□□□□□ -0.86
LINC00643-207ENST00000637212 TYMSP04818 313 aa9.71□□□□□ -0.86
LINC00643-207ENST00000637212 IGLC6P0CF74 106 aa9.71□□□□□ -0.86
LINC00643-207ENST00000637212 S100A4P26447 101 aaKnown RBP9.71□□□□□ -0.86
LINC00643-207ENST00000637212 ZNF493Q6ZR52 646 aa9.71□□□□□ -0.86
LINC00643-207ENST00000637212 FER1L6-AS1Q8NA97 138 aa9.71□□□□□ -0.86
LINC00643-207ENST00000637212 GTSF1Q8WW33 167 aa9.71□□□□□ -0.86
LINC00643-207ENST00000637212 RNF183Q96D59 192 aa9.71□□□□□ -0.86
LINC00643-207ENST00000637212 RCHY1Q96PM5 261 aa9.71□□□□□ -0.86
LINC00643-207ENST00000637212 TP53TG1Q9Y2A0 90 aa9.71□□□□□ -0.86
LINC00643-207ENST00000637212 HIGD1CA8MV81 97 aa9.7□□□□□ -0.86
LINC00643-207ENST00000637212 PRB2P02812 416 aaPredicted RBP9.7□□□□□ -0.86
LINC00643-207ENST00000637212 OR5AL1P0C617 328 aa9.7□□□□□ -0.86
LINC00643-207ENST00000637212 ARMS2P0C7Q2 107 aa9.7□□□□□ -0.86
LINC00643-207ENST00000637212 GZMBP10144 247 aa9.7□□□□□ -0.86
LINC00643-207ENST00000637212 FAM3BP58499 235 aaPredicted RBP9.7□□□□□ -0.86
LINC00643-207ENST00000637212 DEFB121Q5J5C9 76 aa9.7□□□□□ -0.86
LINC00643-207ENST00000637212 NUP35Q8NFH5 326 aa9.7□□□□□ -0.86
LINC00643-207ENST00000637212 SCRT2Q9NQ03 307 aa9.7□□□□□ -0.86
LINC00643-207ENST00000637212 IGHV3OR16-12A0A075B7B8 117 aa9.69□□□□□ -0.86
LINC00643-207ENST00000637212 SPRY2O43597 315 aa9.69□□□□□ -0.86
LINC00643-207ENST00000637212 SNAI2O43623 268 aa9.69□□□□□ -0.86
LINC00643-207ENST00000637212 HTN1P15515 57 aa9.69□□□□□ -0.86
LINC00643-207ENST00000637212 RRN3P1Q2M238 152 aa9.69□□□□□ -0.86
LINC00643-207ENST00000637212 LYZL1Q6UWQ5 148 aa9.69□□□□□ -0.86
LINC00643-207ENST00000637212 PTH2Q96A98 100 aa9.69□□□□□ -0.86
LINC00643-207ENST00000637212 PGLYRP4Q96LB8 373 aa9.69□□□□□ -0.86
LINC00643-207ENST00000637212 SPXQ9BT56 116 aa9.69□□□□□ -0.86
LINC00643-207ENST00000637212 MDFICQ9P1T7 246 aa9.69□□□□□ -0.86
LINC00643-207ENST00000637212 AGRNO00468 2067 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 DNAH3Q8TD57 4116 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 TRBV24-1A0A075B6N3 115 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 IGHV4-4A0A075B6R2 117 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 RNASE3P12724 160 aaKnown RBP9.68□□□□□ -0.86
LINC00643-207ENST00000637212 AZU1P20160 251 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 CTRLP40313 264 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 TCL1AP56279 114 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 CACNG7P62955 275 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 ELOBQ15370 118 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 TMEM88Q6PEY1 159 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 CBLN2Q8IUK8 224 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 TMEM263Q8WUH6 116 aaKnown RBP9.68□□□□□ -0.86
LINC00643-207ENST00000637212 BORCS7Q96B45 105 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 C9orf85Q96MD7 179 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 YPEL4Q96NS1 127 aa9.68□□□□□ -0.86
LINC00643-207ENST00000637212 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms