RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 PRTN3P24158 256 aa10.4□□□□□ -0.74
PCDHB17P-202ENST00000623466 HLA-DMBP28068 263 aa10.4□□□□□ -0.74
PCDHB17P-202ENST00000623466 ITLN2Q8WWU7 325 aaPredicted RBP10.4□□□□□ -0.74
PCDHB17P-202ENST00000623466 IFI27L1Q96BM0 104 aa10.4□□□□□ -0.74
PCDHB17P-202ENST00000623466 MRPS12O15235 138 aaKnown RBP10.39□□□□□ -0.75
PCDHB17P-202ENST00000623466 LINC00527Q9UJ94 153 aa10.39□□□□□ -0.75
PCDHB17P-202ENST00000623466 LINC01548A6NM66 108 aa10.39□□□□□ -0.75
PCDHB17P-202ENST00000623466 HBDP02042 147 aa10.39□□□□□ -0.75
PCDHB17P-202ENST00000623466 EGR2P11161 476 aaPredicted RBP10.39□□□□□ -0.75
PCDHB17P-202ENST00000623466 ZNF80P51504 273 aaPredicted RBP10.39□□□□□ -0.75
PCDHB17P-202ENST00000623466 ZFAND6Q6FIF0 208 aa10.39□□□□□ -0.75
PCDHB17P-202ENST00000623466 ZNF493Q6ZR52 646 aa10.39□□□□□ -0.75
PCDHB17P-202ENST00000623466 AAMDCQ9H7C9 122 aa10.39□□□□□ -0.75
PCDHB17P-202ENST00000623466 CUBNO60494 3623 aa10.39□□□□□ -0.75
PCDHB17P-202ENST00000623466 DOPEY1Q5JWR5 2465 aa10.39□□□□□ -0.75
PCDHB17P-202ENST00000623466 TRBV20-1A0A075B6N2 111 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 IGHV3OR16-13A0A075B7E8 117 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 IGHV3-74A0A0B4J1X5 117 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 IGLL5B9A064 214 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 CCDC179H3BU77 68 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 LGALS9BQ3B8N2 356 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 LGALS9CQ6DKI2 356 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 TEX29Q8N6K0 151 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 OR11H6Q8NGC7 330 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 E9PLD3 99 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 EVI2AP22794 236 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 NRGNQ92686 78 aa10.38□□□□□ -0.75
PCDHB17P-202ENST00000623466 ABCA2Q9BZC7 2435 aa10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 GATA1P15976 413 aaPredicted RBP10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 GATD1Q8NB37 220 aa10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 ZNF502Q8TBZ5 544 aa10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 PHLDA1Q8WV24 401 aaPredicted RBP10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 CREBBPQ92793 2442 aa10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 IGKV2D-26A0A0A0MRZ7 120 aa10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 TRBV6-1A0A0K0K1D8 114 aa10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 PF4V1P10720 104 aa10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 Q6AWC8 147 aa10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 TMEM219Q86XT9 240 aa10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 ECSCRQ19T08 205 aa10.37□□□□□ -0.75
PCDHB17P-202ENST00000623466 ORM1P02763 201 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 ZNF562Q6V9R5 426 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 BRD3OSQ6XYD6 125 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 LCNL1Q6ZST4 164 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 FANCD2OSQ96PS1 177 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 USP24Q9UPU5 2620 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 U3KQK5 164 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 IGHV3-66A0A0C4DH42 116 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 NHLRC4P0CG21 123 aaPredicted RBP10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 PAX8Q06710 450 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 DTX2Q86UW9 622 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 PRO0461Q9UI25 63 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 AGRNO00468 2067 aa10.36□□□□□ -0.75
PCDHB17P-202ENST00000623466 IGHV3-49A0A0A0MS15 119 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 GAGE12JA6NER3 117 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 GAGE7O76087 117 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 GAGE12FP0CL80 117 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 GAGE12GP0CL81 117 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 GAGE12IP0CL82 117 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 GAGE4Q13068 117 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 LYPD1Q8N2G4 141 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 PRR25Q96S07 402 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 CHAC1Q9BUX1 264 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 ODF3BA8MYP8 253 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 G3V318 75 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 M0QXV9 152 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 PRB1P04280 392 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 SAA4P35542 130 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 KIR2DL4Q99706 377 aa10.35□□□□□ -0.75
PCDHB17P-202ENST00000623466 WI2-2373I1.2A0A1W2PRP0 233 aa10.34□□□□□ -0.75
PCDHB17P-202ENST00000623466 PRSS1P07477 247 aa10.34□□□□□ -0.75
PCDHB17P-202ENST00000623466 LEPP41159 167 aa10.34□□□□□ -0.75
PCDHB17P-202ENST00000623466 PPDPFQ9H3Y8 114 aa10.34□□□□□ -0.75
PCDHB17P-202ENST00000623466 ERCC8Q13216 396 aa10.34□□□□□ -0.75
PCDHB17P-202ENST00000623466 ZNF575Q86XF7 245 aa10.34□□□□□ -0.75
PCDHB17P-202ENST00000623466 RAX2Q96IS3 184 aa10.34□□□□□ -0.75
PCDHB17P-202ENST00000623466 FABP5P3A8MUU1 101 aa10.33□□□□□ -0.76
PCDHB17P-202ENST00000623466 M0R1W7 72 aa10.33□□□□□ -0.76
PCDHB17P-202ENST00000623466 PTH2Q96A98 100 aa10.33□□□□□ -0.76
PCDHB17P-202ENST00000623466 FCER1GP30273 86 aa10.33□□□□□ -0.76
PCDHB17P-202ENST00000623466 EFNA4P52798 201 aa10.33□□□□□ -0.76
PCDHB17P-202ENST00000623466 LMO4P61968 165 aa10.33□□□□□ -0.76
PCDHB17P-202ENST00000623466 GTSCR1Q86UQ5 136 aa10.33□□□□□ -0.76
PCDHB17P-202ENST00000623466 F8W735 103 aaPredicted RBP10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 SIRPDQ9H106 197 aa10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 SONP18583 2426 aaKnown RBP10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 IGHV7-81A0A0B4J1V7 117 aa10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 IGHV4-39P01824 125 aa10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 RNF185Q96GF1 192 aa10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 CCDC168Q8NDH2 2452 aa10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 PRAC2D3DTV9 90 aa10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 NDUFA3O95167 84 aa10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 SFTA2Q6UW10 78 aa10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 CEND1Q8N111 149 aa10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 VPREB3Q9UKI3 123 aa10.32□□□□□ -0.76
PCDHB17P-202ENST00000623466 IGHG4P01861 327 aa10.31□□□□□ -0.76
PCDHB17P-202ENST00000623466 MFAP4P55083 255 aa10.31□□□□□ -0.76
PCDHB17P-202ENST00000623466 RNF182Q8N6D2 247 aa10.31□□□□□ -0.76
PCDHB17P-202ENST00000623466 NPBQ8NG41 125 aa10.31□□□□□ -0.76
PCDHB17P-202ENST00000623466 SMAD5-AS1Q9Y6J3 95 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms