RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ADARB2-AS1A8MUL3 147 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 A8MWP6 167 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 NTF3P20783 257 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 FXYD7P58549 80 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 NSUN5P1Q3KNT7 163 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 WDR73Q6P4I2 378 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 FAM19A2Q8N3H0 131 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 C4orf3Q8WVX3 66 aa5.84□□□□□ -1.47
NEK3-207ENST00000617054 A0A1B0GUT8 65 aa5.84□□□□□ -1.48
NEK3-207ENST00000617054 RBAKDNA6NC62 111 aa5.84□□□□□ -1.48
NEK3-207ENST00000617054 HLA-DQA1P01909 254 aa5.84□□□□□ -1.48
NEK3-207ENST00000617054 GPX1P07203 203 aa5.84□□□□□ -1.48
NEK3-207ENST00000617054 RNASE1P07998 156 aaKnown RBP5.84□□□□□ -1.48
NEK3-207ENST00000617054 TWIST1Q15672 202 aa5.84□□□□□ -1.48
NEK3-207ENST00000617054 OR9G4Q8NGQ1 327 aa5.84□□□□□ -1.48
NEK3-207ENST00000617054 M0R2Z0 102 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 BMI1P35226 326 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 HILS1P60008 231 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 PMCHL1Q16048 86 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 TEX29Q8N6K0 151 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 ZFAND2AQ8N6M9 145 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 GFRA4Q9GZZ7 299 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 NBEAL2Q6ZNJ1 2754 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 GNRH2O43555 120 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 PRM2P04554 102 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 CSN3P07498 182 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 TMEM61Q8N0U2 210 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 RNF114Q9Y508 228 aa5.83□□□□□ -1.48
NEK3-207ENST00000617054 KNCNA6PVL3 124 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 SMKR1H3BMG3 65 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 GAS8-AS1O95177 125 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 AMN1Q8IY45 258 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 FER1L6-AS1Q8NA97 138 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 CCL24O00175 119 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 LGALS9O00182 355 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 MT-ND6P03923 174 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 SMIM6P0DI80 62 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 PMCHP20382 165 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 KRTAP10-3P60369 221 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 APRG1Q8IVJ8 170 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 OR10AG1Q8NH19 301 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 C18orf32Q8TCD1 76 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 FBN1P35555 2871 aaKnown RBP5.82□□□□□ -1.48
NEK3-207ENST00000617054 TRAV12-3A0A0B4J271 114 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 HTN1P15515 57 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 CD300EQ496F6 205 aaPredicted RBP5.82□□□□□ -1.48
NEK3-207ENST00000617054 COX8CQ7Z4L0 72 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 ARL6IP6Q8N6S5 226 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 MRPL53Q96EL3 112 aaKnown RBP5.82□□□□□ -1.48
NEK3-207ENST00000617054 LINC00477Q96M19 166 aa5.82□□□□□ -1.48
NEK3-207ENST00000617054 ALKBH7Q9BT30 221 aaPredicted RBP5.82□□□□□ -1.48
NEK3-207ENST00000617054 H3BVH4 76 aa5.81□□□□□ -1.48
NEK3-207ENST00000617054 K7EQG2 157 aa5.81□□□□□ -1.48
NEK3-207ENST00000617054 OVOL1O14753 267 aa5.81□□□□□ -1.48
NEK3-207ENST00000617054 ID1P41134 155 aa5.81□□□□□ -1.48
NEK3-207ENST00000617054 DEFB131AP59861 70 aa5.81□□□□□ -1.48
NEK3-207ENST00000617054 SPINK13Q1W4C9 94 aa5.81□□□□□ -1.48
NEK3-207ENST00000617054 COA6Q5JTJ3 125 aaKnown RBP5.81□□□□□ -1.48
NEK3-207ENST00000617054 ATP5L2Q7Z4Y8 100 aa5.81□□□□□ -1.48
NEK3-207ENST00000617054 NCR2O95944 276 aa5.81□□□□□ -1.48
NEK3-207ENST00000617054 S100A8P05109 93 aa5.81□□□□□ -1.48
NEK3-207ENST00000617054 SNRPD3P62318 126 aaKnown RBP5.81□□□□□ -1.48
NEK3-207ENST00000617054 LBHQ53QV2 105 aaPredicted RBP5.81□□□□□ -1.48
NEK3-207ENST00000617054 LOC389332A0A1B0GUA5 103 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 FAM231BA6NCW3 169 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 CYSRT1A8MQ03 144 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 EVI2AP22794 236 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 RIGQ13278 110 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 ANXA2RQ3ZCQ2 193 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 DYNLRB2Q8TF09 96 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 SAMD10Q9BYL1 202 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 PPP1R14DQ9NXH3 145 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 LOC102724200A0A096LPH7 203 aaPredicted RBP5.8□□□□□ -1.48
NEK3-207ENST00000617054 IGLC6P0CF74 106 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 RNASEKQ6P5S7 137 aaKnown RBP5.8□□□□□ -1.48
NEK3-207ENST00000617054 GATA1P15976 413 aaPredicted RBP5.8□□□□□ -1.48
NEK3-207ENST00000617054 RASL11AQ6T310 242 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 BORCS7Q96B45 105 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 URB1-AS1Q96HZ7 61 aa5.8□□□□□ -1.48
NEK3-207ENST00000617054 TRAV26-2A0A0B4J265 109 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 A0A0J9YX75 114 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 FBLL1A6NHQ2 334 aaKnown RBP5.79□□□□□ -1.48
NEK3-207ENST00000617054 D6R8Y8 96 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 M0R381 172 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 Q0VG73 95 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 DEFB114Q30KQ6 69 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 NIT1Q86X76 327 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 TMEM18Q96B42 140 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 PEMTQ9UBM1 199 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 TSSC4Q9Y5U2 329 aaPredicted RBP5.79□□□□□ -1.48
NEK3-207ENST00000617054 MUC4Q99102 2169 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 AMTP48728 403 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 PAFAH1B2P68402 229 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 Q6ZWC4 215 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 SPATA3Q8NHX4 192 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 DEFB104AQ8WTQ1 72 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 FAM19A4Q96LR4 140 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 PRO1933Q9H354 126 aa5.79□□□□□ -1.48
NEK3-207ENST00000617054 S100A4P26447 101 aaKnown RBP5.79□□□□□ -1.48
NEK3-207ENST00000617054 PROK1P58294 105 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms