RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 HOXB4P17483 251 aaPredicted RBP9.72□□□□□ -0.85
MSH6-213ENST00000614496 ZFP36P26651 326 aaKnown RBP9.72□□□□□ -0.85
MSH6-213ENST00000614496 NPFFR1Q9GZQ6 430 aa9.72□□□□□ -0.85
MSH6-213ENST00000614496 TRBV6-1A0A0K0K1D8 114 aa9.71□□□□□ -0.85
MSH6-213ENST00000614496 PLNP26678 52 aa9.71□□□□□ -0.85
MSH6-213ENST00000614496 Q8N9W7 124 aa9.71□□□□□ -0.85
MSH6-213ENST00000614496 DPH3P1Q9H4G8 78 aa9.71□□□□□ -0.85
MSH6-213ENST00000614496 TRBV7-1A0A0A6YYK4 115 aa9.71□□□□□ -0.85
MSH6-213ENST00000614496 LINC01548A6NM66 108 aa9.71□□□□□ -0.85
MSH6-213ENST00000614496 ATP5J2P56134 94 aa9.71□□□□□ -0.85
MSH6-213ENST00000614496 IGF2-ASQ6U949 168 aa9.71□□□□□ -0.85
MSH6-213ENST00000614496 C9orf139Q6ZV77 190 aa9.71□□□□□ -0.85
MSH6-213ENST00000614496 C2CD3Q4AC94 2353 aa9.71□□□□□ -0.86
MSH6-213ENST00000614496 IGKV2D-26A0A0A0MRZ7 120 aa9.71□□□□□ -0.86
MSH6-213ENST00000614496 TNFRSF13BO14836 293 aaPredicted RBP9.71□□□□□ -0.86
MSH6-213ENST00000614496 UCNP55089 124 aa9.71□□□□□ -0.86
MSH6-213ENST00000614496 SUMO2P61956 95 aaKnown RBP9.71□□□□□ -0.86
MSH6-213ENST00000614496 CLEC2AQ6UVW9 174 aa9.71□□□□□ -0.86
MSH6-213ENST00000614496 C2orf66Q6UXQ4 117 aa9.71□□□□□ -0.86
MSH6-213ENST00000614496 PGPEP1Q9NXJ5 209 aa9.71□□□□□ -0.86
MSH6-213ENST00000614496 NACAE9PAV3 2078 aa9.71□□□□□ -0.86
MSH6-213ENST00000614496 TRAV12-3A0A0B4J271 114 aa9.71□□□□□ -0.86
MSH6-213ENST00000614496 ODF1Q14990 250 aa9.71□□□□□ -0.86
MSH6-213ENST00000614496 H3BUX3 64 aa9.7□□□□□ -0.86
MSH6-213ENST00000614496 UBE2E1P51965 193 aa9.7□□□□□ -0.86
MSH6-213ENST00000614496 ANXA2RQ3ZCQ2 193 aa9.7□□□□□ -0.86
MSH6-213ENST00000614496 SIGMAR1Q99720 223 aa9.7□□□□□ -0.86
MSH6-213ENST00000614496 MOB4Q9Y3A3 225 aa9.7□□□□□ -0.86
MSH6-213ENST00000614496 TEX48A0A1B0GUV7 120 aa9.7□□□□□ -0.86
MSH6-213ENST00000614496 SIVA1O15304 175 aa9.7□□□□□ -0.86
MSH6-213ENST00000614496 ZNF688P0C7X2 276 aa9.7□□□□□ -0.86
MSH6-213ENST00000614496 CEND1Q8N111 149 aa9.7□□□□□ -0.86
MSH6-213ENST00000614496 SMIM2Q9BVW6 85 aa9.7□□□□□ -0.86
MSH6-213ENST00000614496 RPL39LQ96EH5 51 aaKnown RBP9.7□□□□□ -0.86
MSH6-213ENST00000614496 LY6LH3BQJ8 138 aa9.69□□□□□ -0.86
MSH6-213ENST00000614496 OVOL3O00110 214 aa9.69□□□□□ -0.86
MSH6-213ENST00000614496 OVOL1O14753 267 aa9.69□□□□□ -0.86
MSH6-213ENST00000614496 SLC25A16P16260 332 aa9.69□□□□□ -0.86
MSH6-213ENST00000614496 SMAD5-AS1Q9Y6J3 95 aa9.69□□□□□ -0.86
MSH6-213ENST00000614496 GNRH2O43555 120 aa9.69□□□□□ -0.86
MSH6-213ENST00000614496 TCF15Q12870 199 aa9.69□□□□□ -0.86
MSH6-213ENST00000614496 RHPN1-AS1Q9BWJ2 59 aa9.69□□□□□ -0.86
MSH6-213ENST00000614496 LINC00477Q96M19 166 aa9.69□□□□□ -0.86
MSH6-213ENST00000614496 TSSC4Q9Y5U2 329 aaPredicted RBP9.69□□□□□ -0.86
MSH6-213ENST00000614496 PTPN13Q12923 2485 aa9.68□□□□□ -0.86
MSH6-213ENST00000614496 IGKV3D-20A0A0C4DH25 116 aa9.68□□□□□ -0.86
MSH6-213ENST00000614496 PRSS47A8MTI9 375 aa9.68□□□□□ -0.86
MSH6-213ENST00000614496 SH2D6Q7Z4S9 175 aa9.68□□□□□ -0.86
MSH6-213ENST00000614496 LINC01559Q495D7 138 aa9.68□□□□□ -0.86
MSH6-213ENST00000614496 CHD8Q9HCK8 2581 aa9.68□□□□□ -0.86
MSH6-213ENST00000614496 F8VRH5 84 aa9.68□□□□□ -0.86
MSH6-213ENST00000614496 IGLC6P0CF74 106 aa9.68□□□□□ -0.86
MSH6-213ENST00000614496 PRADC1Q9BSG0 188 aa9.68□□□□□ -0.86
MSH6-213ENST00000614496 PIMREGQ9BSJ6 248 aa9.68□□□□□ -0.86
MSH6-213ENST00000614496 C12orf74Q32Q52 190 aa9.67□□□□□ -0.86
MSH6-213ENST00000614496 DGAT2L7PQ6IED9 249 aa9.67□□□□□ -0.86
MSH6-213ENST00000614496 SYT8Q8NBV8 401 aa9.67□□□□□ -0.86
MSH6-213ENST00000614496 MSRB2Q9Y3D2 182 aa9.67□□□□□ -0.86
MSH6-213ENST00000614496 A0A087WX48 190 aa9.67□□□□□ -0.86
MSH6-213ENST00000614496 A0A096LNJ9 63 aa9.67□□□□□ -0.86
MSH6-213ENST00000614496 LINC01549A6NIU2 74 aa9.67□□□□□ -0.86
MSH6-213ENST00000614496 PPP1R17O96001 155 aa9.67□□□□□ -0.86
MSH6-213ENST00000614496 IGF1P05019 195 aa9.67□□□□□ -0.86
MSH6-213ENST00000614496 WFDC2Q14508 124 aa9.67□□□□□ -0.86
MSH6-213ENST00000614496 IGHV3-73A0A0B4J1V6 119 aa9.66□□□□□ -0.86
MSH6-213ENST00000614496 NDUFS8O00217 210 aa9.66□□□□□ -0.86
MSH6-213ENST00000614496 Q6ZQT7 251 aa9.66□□□□□ -0.86
MSH6-213ENST00000614496 TP53TG1Q9Y2A0 90 aa9.66□□□□□ -0.86
MSH6-213ENST00000614496 LY6G5BQ8NDX9 201 aa9.66□□□□□ -0.86
MSH6-213ENST00000614496 MRAP2Q96G30 205 aa9.66□□□□□ -0.86
MSH6-213ENST00000614496 DUX5Q96PT3 197 aa9.66□□□□□ -0.86
MSH6-213ENST00000614496 TRAV2A0A0B4J234 112 aa9.66□□□□□ -0.86
MSH6-213ENST00000614496 MYMXA0A1B0GTQ4 84 aa9.66□□□□□ -0.86
MSH6-213ENST00000614496 RNF185Q96GF1 192 aa9.66□□□□□ -0.86
MSH6-213ENST00000614496 SPTBN4Q9H254 2564 aa9.66□□□□□ -0.86
MSH6-213ENST00000614496 SNRPD3P62318 126 aaKnown RBP9.65□□□□□ -0.86
MSH6-213ENST00000614496 CCL19Q99731 98 aa9.65□□□□□ -0.86
MSH6-213ENST00000614496 CENPVL3A0A0U1RRI6 287 aa9.65□□□□□ -0.87
MSH6-213ENST00000614496 MRPS12O15235 138 aaKnown RBP9.65□□□□□ -0.87
MSH6-213ENST00000614496 HLA-DRB4P13762 266 aa9.65□□□□□ -0.87
MSH6-213ENST00000614496 HLA-DRB4X5D2U9 266 aa9.65□□□□□ -0.87
MSH6-213ENST00000614496 IGHV3OR16-12A0A075B7B8 117 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 PRSS29PA6NIE9 313 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 ADORA2A-AS1P86434 159 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 KLHL30-AS1Q8NEE0 82 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 HIVEP3Q5T1R4 2406 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 IGLL5B9A064 214 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 CDSNQ15517 529 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 TRAV12-2A0A075B6T6 113 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 FGF6P10767 208 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 C11orf21Q9P2W6 132 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 WNK1Q9H4A3 2382 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 LOC400499M0QZD8 3231 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 TRBV12-3P01733 135 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 RAX2Q96IS3 184 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 CCDC140Q96MF4 163 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 U3KQK5 164 aa9.64□□□□□ -0.87
MSH6-213ENST00000614496 ODF3BA8MYP8 253 aa9.63□□□□□ -0.87
MSH6-213ENST00000614496 MAPKAPK5-AS1Q8N8E1 139 aa9.63□□□□□ -0.87
MSH6-213ENST00000614496 MYO9AB2RTY4 2548 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms