RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 PRTN3P24158 256 aa9.56□□□□□ -0.88
CDCA3-212ENST00000604599 EMP1P54849 157 aa9.56□□□□□ -0.88
CDCA3-212ENST00000604599 NDUFA11Q86Y39 141 aa9.56□□□□□ -0.88
CDCA3-212ENST00000604599 RASL10AQ92737 203 aa9.56□□□□□ -0.88
CDCA3-212ENST00000604599 IGLV11-55A0A075B6I3 123 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 IGHV3OR16-13A0A075B7E8 117 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 IGHV3-74A0A0B4J1X5 117 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 NBR2O15453 112 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 LYRM7Q5U5X0 104 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 ZNF883P0CG24 379 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 SCGB1C2P0DMR2 95 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 HES1Q14469 280 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 ZNF672Q499Z4 452 aaPredicted RBP9.55□□□□□ -0.88
CDCA3-212ENST00000604599 OR11H6Q8NGC7 330 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 BAALCQ8WXS3 180 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 DYNLRB1Q9NP97 96 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 NHLRC4P0CG21 123 aaPredicted RBP9.55□□□□□ -0.88
CDCA3-212ENST00000604599 KAAG1Q9UBP8 84 aa9.55□□□□□ -0.88
CDCA3-212ENST00000604599 CACNA1HO95180 2353 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 TRBV20-1A0A075B6N2 111 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 LYNX1G3V0Z9 82 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 LYNX1P0DP58 116 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 COX6B1P14854 86 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 DEFB104AQ8WTQ1 72 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 TOMM6Q96B49 74 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 RPL39LQ96EH5 51 aaKnown RBP9.54□□□□□ -0.88
CDCA3-212ENST00000604599 AGPAT4-IT1Q9H0P7 198 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 ABCA4P78363 2273 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 EP300Q09472 2414 aaPredicted RBP9.54□□□□□ -0.88
CDCA3-212ENST00000604599 NDPQ00604 133 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 ORMDL2Q53FV1 153 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 C2orf66Q6UXQ4 117 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 AJUBAQ96IF1 538 aa9.54□□□□□ -0.88
CDCA3-212ENST00000604599 CTSGP08311 255 aa9.53□□□□□ -0.88
CDCA3-212ENST00000604599 IGFL2Q6UWQ7 119 aa9.53□□□□□ -0.88
CDCA3-212ENST00000604599 Q6ZS46 218 aa9.53□□□□□ -0.88
CDCA3-212ENST00000604599 J3KRW8 73 aa9.53□□□□□ -0.88
CDCA3-212ENST00000604599 SUMO2P61956 95 aaKnown RBP9.53□□□□□ -0.88
CDCA3-212ENST00000604599 RNASE6Q93091 150 aaKnown RBP9.53□□□□□ -0.88
CDCA3-212ENST00000604599 CITED1Q99966 193 aa9.53□□□□□ -0.88
CDCA3-212ENST00000604599 VCX2Q9H322 139 aa9.53□□□□□ -0.88
CDCA3-212ENST00000604599 APC2O95996 2303 aa9.53□□□□□ -0.88
CDCA3-212ENST00000604599 TRAV8-2A0A0B4J237 113 aa9.52□□□□□ -0.88
CDCA3-212ENST00000604599 M0R381 172 aa9.52□□□□□ -0.88
CDCA3-212ENST00000604599 CFC1BP0CG36 223 aa9.52□□□□□ -0.88
CDCA3-212ENST00000604599 CFC1P0CG37 223 aa9.52□□□□□ -0.88
CDCA3-212ENST00000604599 DEFB109BQ30KR1 87 aa9.52□□□□□ -0.88
CDCA3-212ENST00000604599 RNF5Q99942 180 aa9.52□□□□□ -0.89
CDCA3-212ENST00000604599 HIF1ANQ9NWT6 349 aa9.52□□□□□ -0.89
CDCA3-212ENST00000604599 MSRB2Q9Y3D2 182 aa9.52□□□□□ -0.89
CDCA3-212ENST00000604599 BDP1A6H8Y1 2624 aa9.52□□□□□ -0.89
CDCA3-212ENST00000604599 IGHV3-49A0A0A0MS15 119 aa9.52□□□□□ -0.89
CDCA3-212ENST00000604599 TRAV4A0A0B4J268 109 aa9.52□□□□□ -0.89
CDCA3-212ENST00000604599 A0A0J9YY99 117 aa9.52□□□□□ -0.89
CDCA3-212ENST00000604599 C9JAW5 83 aa9.52□□□□□ -0.89
CDCA3-212ENST00000604599 TMEM262E9PQX1 116 aa9.52□□□□□ -0.89
CDCA3-212ENST00000604599 CRIP2P52943 208 aaPredicted RBP9.52□□□□□ -0.89
CDCA3-212ENST00000604599 SBSPONQ8IVN8 264 aa9.52□□□□□ -0.89
CDCA3-212ENST00000604599 SLC25A20O43772 301 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 CRLF1O75462 422 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 CFAP161Q6P656 301 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 SHISA2Q6UWI4 295 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 C10orf126Q8N4M7 172 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 RAX2Q96IS3 184 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 GVINP1Q7Z2Y8 2422 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 DCHS2Q6V1P9 2916 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 LRBAP50851 2863 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 C11orf86A6NJI1 115 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 LY6LH3BQJ8 138 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 CCDC179H3BU77 68 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 CDX4O14627 284 aaPredicted RBP9.51□□□□□ -0.89
CDCA3-212ENST00000604599 GAGE2BQ13066 116 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 GAGE2EQ4V326 116 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 TRPT1Q86TN4 253 aaKnown RBP9.51□□□□□ -0.89
CDCA3-212ENST00000604599 SLC50A1Q9BRV3 221 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 GAGE2DQ9UEU5 116 aa9.51□□□□□ -0.89
CDCA3-212ENST00000604599 H7C2G1 150 aa9.5□□□□□ -0.89
CDCA3-212ENST00000604599 SNCGO76070 127 aa9.5□□□□□ -0.89
CDCA3-212ENST00000604599 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
CDCA3-212ENST00000604599 RHODO00212 210 aa9.5□□□□□ -0.89
CDCA3-212ENST00000604599 MGPP08493 103 aa9.5□□□□□ -0.89
CDCA3-212ENST00000604599 SRD5A1P18405 259 aa9.5□□□□□ -0.89
CDCA3-212ENST00000604599 DUSP14O95147 198 aaKnown RBP9.49□□□□□ -0.89
CDCA3-212ENST00000604599 C14orf178Q8N769 122 aaPredicted RBP9.49□□□□□ -0.89
CDCA3-212ENST00000604599 MED13LQ71F56 2210 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 IGHV3-30P01768 117 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 IGHV3-30-5P0DP03 117 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 TSPEAR-AS2P59090 65 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 SMIM20Q8N5G0 67 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 PRO1854Q9UHT4 67 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 SVEP1Q4LDE5 3571 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 TRBV7-9A0A0J9YWB2 115 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 RBAKDNA6NC62 111 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 HERV-K104P63124 156 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 PRR9Q5T870 116 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 TTC28Q96AY4 2481 aa9.49□□□□□ -0.89
CDCA3-212ENST00000604599 BUB3O43684 328 aa9.48□□□□□ -0.89
CDCA3-212ENST00000604599 CRYGDP07320 174 aa9.48□□□□□ -0.89
CDCA3-212ENST00000604599 IGHV4-4A0A075B6R2 117 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms