RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 TPPP3Q9BW30 176 aa16.56■□□□□ 0.24
PPFIA3-211ENST00000602848 HLA-DRB4P13762 266 aa16.56■□□□□ 0.24
PPFIA3-211ENST00000602848 DNLZQ5SXM8 178 aa16.56■□□□□ 0.24
PPFIA3-211ENST00000602848 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.56■□□□□ 0.24
PPFIA3-211ENST00000602848 CLUHP3Q96NS8 147 aa16.56■□□□□ 0.24
PPFIA3-211ENST00000602848 SSBP4Q9BWG4 385 aaPredicted RBP16.56■□□□□ 0.24
PPFIA3-211ENST00000602848 MAP6D1Q9H9H5 199 aa16.56■□□□□ 0.24
PPFIA3-211ENST00000602848 HLA-DRB4X5D2U9 266 aa16.56■□□□□ 0.24
PPFIA3-211ENST00000602848 GRIFINA4D1Z8 144 aa16.55■□□□□ 0.24
PPFIA3-211ENST00000602848 SLAQ13239 276 aa16.55■□□□□ 0.24
PPFIA3-211ENST00000602848 C7orf71A4D174 169 aa16.54■□□□□ 0.24
PPFIA3-211ENST00000602848 SAP30O75446 220 aa16.54■□□□□ 0.24
PPFIA3-211ENST00000602848 IGLV1-51P01701 117 aa16.54■□□□□ 0.24
PPFIA3-211ENST00000602848 OR5AL1P0C617 328 aa16.54■□□□□ 0.24
PPFIA3-211ENST00000602848 MED14OSP0DP75 135 aa16.54■□□□□ 0.24
PPFIA3-211ENST00000602848 CDKN1BP46527 198 aa16.54■□□□□ 0.24
PPFIA3-211ENST00000602848 OR10J3Q5JRS4 329 aa16.54■□□□□ 0.24
PPFIA3-211ENST00000602848 KCNS1Q96KK3 526 aa16.54■□□□□ 0.24
PPFIA3-211ENST00000602848 H3BMM0 161 aa16.53■□□□□ 0.24
PPFIA3-211ENST00000602848 PF4P02776 101 aa16.53■□□□□ 0.24
PPFIA3-211ENST00000602848 AMTNQ6UX39 209 aa16.53■□□□□ 0.24
PPFIA3-211ENST00000602848 FBN1P35555 2871 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-211ENST00000602848 J3KRW8 73 aa16.52■□□□□ 0.24
PPFIA3-211ENST00000602848 SNAI2O43623 268 aa16.52■□□□□ 0.24
PPFIA3-211ENST00000602848 CACNG7P62955 275 aa16.52■□□□□ 0.24
PPFIA3-211ENST00000602848 HIST3H2BBQ8N257 126 aa16.52■□□□□ 0.24
PPFIA3-211ENST00000602848 CITED1Q99966 193 aa16.52■□□□□ 0.23
PPFIA3-211ENST00000602848 FAM110AQ9BQ89 295 aa16.52■□□□□ 0.23
PPFIA3-211ENST00000602848 IGHV4-4A0A075B6R2 117 aa16.51■□□□□ 0.23
PPFIA3-211ENST00000602848 KIAA1644Q3SXP7 199 aa16.51■□□□□ 0.23
PPFIA3-211ENST00000602848 LINC00482Q8N8I6 264 aa16.51■□□□□ 0.23
PPFIA3-211ENST00000602848 LOC102724200A0A096LPH7 203 aaPredicted RBP16.5■□□□□ 0.23
PPFIA3-211ENST00000602848 ZNF324O75467 553 aaPredicted RBP16.5■□□□□ 0.23
PPFIA3-211ENST00000602848 NTF3P20783 257 aa16.5■□□□□ 0.23
PPFIA3-211ENST00000602848 SRIP30626 198 aa16.5■□□□□ 0.23
PPFIA3-211ENST00000602848 ASIPP42127 132 aa16.5■□□□□ 0.23
PPFIA3-211ENST00000602848 TWIST1Q15672 202 aa16.5■□□□□ 0.23
PPFIA3-211ENST00000602848 KRTAP24-1Q3LI83 254 aa16.5■□□□□ 0.23
PPFIA3-211ENST00000602848 TDRG1Q3Y452 100 aa16.5■□□□□ 0.23
PPFIA3-211ENST00000602848 ANXA2RQ3ZCQ2 193 aa16.5■□□□□ 0.23
PPFIA3-211ENST00000602848 FAM159AQ6UWV7 190 aa16.5■□□□□ 0.23
PPFIA3-211ENST00000602848 ALKBH7Q9BT30 221 aaPredicted RBP16.5■□□□□ 0.23
PPFIA3-211ENST00000602848 KNCNA6PVL3 124 aa16.49■□□□□ 0.23
PPFIA3-211ENST00000602848 S100A2P29034 98 aa16.49■□□□□ 0.23
PPFIA3-211ENST00000602848 Q6ZQT7 251 aa16.49■□□□□ 0.23
PPFIA3-211ENST00000602848 NAGKQ9UJ70 344 aa16.49■□□□□ 0.23
PPFIA3-211ENST00000602848 KIR3DS1Q14943 382 aa16.48■□□□□ 0.23
PPFIA3-211ENST00000602848 GFI1BQ5VTD9 330 aa16.48■□□□□ 0.23
PPFIA3-211ENST00000602848 TMEM191AQ9H0A3 160 aa16.48■□□□□ 0.23
PPFIA3-211ENST00000602848 OR11H12B2RN74 326 aa16.48■□□□□ 0.23
PPFIA3-211ENST00000602848 IGKV3-20P01619 116 aa16.48■□□□□ 0.23
PPFIA3-211ENST00000602848 ESDP10768 282 aa16.48■□□□□ 0.23
PPFIA3-211ENST00000602848 TRAV12-3A0A0B4J271 114 aa16.47■□□□□ 0.23
PPFIA3-211ENST00000602848 INSL3P51460 131 aa16.47■□□□□ 0.23
PPFIA3-211ENST00000602848 AKR1D1P51857 326 aa16.47■□□□□ 0.23
PPFIA3-211ENST00000602848 ODF3L2Q3SX64 289 aa16.47■□□□□ 0.23
PPFIA3-211ENST00000602848 BAGE3Q86Y29 109 aa16.47■□□□□ 0.23
PPFIA3-211ENST00000602848 AMBPP02760 352 aa16.46■□□□□ 0.23
PPFIA3-211ENST00000602848 S100A4P26447 101 aaKnown RBP16.46■□□□□ 0.23
PPFIA3-211ENST00000602848 SPINK13Q1W4C9 94 aa16.46■□□□□ 0.23
PPFIA3-211ENST00000602848 DMRTA1Q5VZB9 504 aa16.46■□□□□ 0.23
PPFIA3-211ENST00000602848 FAM104BQ5XKR9 115 aa16.46■□□□□ 0.23
PPFIA3-211ENST00000602848 SCRT2Q9NQ03 307 aa16.46■□□□□ 0.23
PPFIA3-211ENST00000602848 M0R2Z0 102 aa16.45■□□□□ 0.22
PPFIA3-211ENST00000602848 BEAN1Q3B7T3 259 aa16.45■□□□□ 0.22
PPFIA3-211ENST00000602848 MUC21Q5SSG8 566 aa16.45■□□□□ 0.22
PPFIA3-211ENST00000602848 SMIM15Q7Z3B0 74 aa16.45■□□□□ 0.22
PPFIA3-211ENST00000602848 C20orf144Q9BQM9 153 aa16.45■□□□□ 0.22
PPFIA3-211ENST00000602848 IFITM10A6NMD0 228 aa16.44■□□□□ 0.22
PPFIA3-211ENST00000602848 SPANXN1Q5VSR9 72 aa16.44■□□□□ 0.22
PPFIA3-211ENST00000602848 C18orf32Q8TCD1 76 aa16.44■□□□□ 0.22
PPFIA3-211ENST00000602848 TP53TG3Q9ULZ0 132 aa16.44■□□□□ 0.22
PPFIA3-211ENST00000602848 COL6A5A8TX70 2615 aa16.43■□□□□ 0.22
PPFIA3-211ENST00000602848 H3BVH4 76 aa16.43■□□□□ 0.22
PPFIA3-211ENST00000602848 KRTAP21-3Q3LHN1 58 aa16.43■□□□□ 0.22
PPFIA3-211ENST00000602848 TMEM256Q8N2U0 113 aa16.43■□□□□ 0.22
PPFIA3-211ENST00000602848 TMEM18Q96B42 140 aa16.43■□□□□ 0.22
PPFIA3-211ENST00000602848 IGHV1OR15-1A0A075B7D0 117 aa16.42■□□□□ 0.22
PPFIA3-211ENST00000602848 MUC21A0A0G2JKD1 596 aa16.42■□□□□ 0.22
PPFIA3-211ENST00000602848 MUC21A0A140T8X8 626 aa16.42■□□□□ 0.22
PPFIA3-211ENST00000602848 GNRH2O43555 120 aa16.42■□□□□ 0.22
PPFIA3-211ENST00000602848 OR10AG1Q8NH19 301 aa16.42■□□□□ 0.22
PPFIA3-211ENST00000602848 HIST1H2BLQ99880 126 aa16.42■□□□□ 0.22
PPFIA3-211ENST00000602848 U3KQK5 164 aa16.42■□□□□ 0.22
PPFIA3-211ENST00000602848 TRAV12-2A0A075B6T6 113 aa16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 STHQ8IWL8 128 aa16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 PACRGQ96M98 296 aaPredicted RBP16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 MSRB1Q9NZV6 116 aa16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 PHLDA3Q9Y5J5 127 aa16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 RBMY1BA6NDE4 496 aaKnown RBP16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 RBMY1EA6NEQ0 496 aaKnown RBP16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 CRXO43186 299 aaPredicted RBP16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 SERF1AO75920 110 aa16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 PPBPP02775 128 aa16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 RBMY1DP0C7P1 496 aaKnown RBP16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 ZNF124Q15973 351 aa16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 PDZD11Q5EBL8 140 aa16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 C9orf66Q5T8R8 295 aa16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 MDFIQ99750 246 aa16.41■□□□□ 0.22
PPFIA3-211ENST00000602848 RNASE3P12724 160 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms