RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 DOPEY2Q9Y3R5 2298 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 ATP5LO75964 103 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 NDPQ00604 133 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 Q6ZUT4 128 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 TTC32Q5I0X7 151 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 LYPD1Q8N2G4 141 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 LINC00311Q8N616 119 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 LINC01560Q8TB33 94 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 LAGE3Q14657 143 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 C2CD3Q4AC94 2353 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 ZNF815PA8K554 130 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 CCDC179H3BU77 68 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 OVOL3O00110 214 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 KLHL30-AS1Q8NEE0 82 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 RNF185Q96GF1 192 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 FAM110AQ9BQ89 295 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 A0A0G2JNJ9 132 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 TMEM78Q5T7P6 136 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 KIR2DL4Q99706 377 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 Q9UFV3 132 aa11.08□□□□□ -0.64
CIRBP-242ENST00000593093 DEFB1P60022 68 aa11.07□□□□□ -0.64
CIRBP-242ENST00000593093 LINC00527Q9UJ94 153 aa11.07□□□□□ -0.64
CIRBP-242ENST00000593093 PRTN3P24158 256 aa11.07□□□□□ -0.64
CIRBP-242ENST00000593093 M0QXV9 152 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 RAB1BQ9H0U4 201 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 COL27A1Q8IZC6 1860 aaPredicted RBP11.06□□□□□ -0.64
CIRBP-242ENST00000593093 GAGE12JA6NER3 117 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 E7EQL1 145 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 E9PLD3 99 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 GAGE7O76087 117 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 GAGE4Q13068 117 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 DPM3Q9P2X0 92 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 RRN3P1Q2M238 152 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 CLEC19AQ6UXS0 136 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 U3KQK5 164 aa11.06□□□□□ -0.64
CIRBP-242ENST00000593093 FOXI1Q12951 378 aa11.05□□□□□ -0.64
CIRBP-242ENST00000593093 ZFP2Q6ZN57 461 aa11.05□□□□□ -0.64
CIRBP-242ENST00000593093 C14orf178Q8N769 122 aaPredicted RBP11.05□□□□□ -0.64
CIRBP-242ENST00000593093 BEX4Q9NWD9 120 aaPredicted RBP11.05□□□□□ -0.64
CIRBP-242ENST00000593093 IGLV1-47P01700 117 aa11.05□□□□□ -0.64
CIRBP-242ENST00000593093 SLC25A16P16260 332 aa11.05□□□□□ -0.64
CIRBP-242ENST00000593093 DLX6P56179 175 aa11.05□□□□□ -0.64
CIRBP-242ENST00000593093 F5H697 171 aa11.04□□□□□ -0.64
CIRBP-242ENST00000593093 SRSF1Q07955 248 aaKnown RBP eCLIP11.04□□□□□ -0.641e-11■■□□□ 11.7
CIRBP-242ENST00000593093 Q8N8P6 123 aa11.04□□□□□ -0.64
CIRBP-242ENST00000593093 IGHV3-64A0A075B6Q5 118 aa11.04□□□□□ -0.64
CIRBP-242ENST00000593093 CRYGBP07316 175 aa11.04□□□□□ -0.64
CIRBP-242ENST00000593093 HOXB4P17483 251 aaPredicted RBP11.04□□□□□ -0.64
CIRBP-242ENST00000593093 THBDP07204 575 aa11.04□□□□□ -0.64
CIRBP-242ENST00000593093 PRR30Q53SZ7 412 aaPredicted RBP11.04□□□□□ -0.64
CIRBP-242ENST00000593093 CDIP1Q9H305 208 aa11.04□□□□□ -0.64
CIRBP-242ENST00000593093 PPDPFQ9H3Y8 114 aa11.04□□□□□ -0.64
CIRBP-242ENST00000593093 PIEZO1Q92508 2521 aa11.04□□□□□ -0.64
CIRBP-242ENST00000593093 GAGE2BQ13066 116 aa11.03□□□□□ -0.64
CIRBP-242ENST00000593093 C15orf32Q32M92 178 aa11.03□□□□□ -0.64
CIRBP-242ENST00000593093 GAGE2EQ4V326 116 aa11.03□□□□□ -0.64
CIRBP-242ENST00000593093 NUP37Q8NFH4 326 aa11.03□□□□□ -0.64
CIRBP-242ENST00000593093 PRADC1Q9BSG0 188 aa11.03□□□□□ -0.64
CIRBP-242ENST00000593093 GAGE2DQ9UEU5 116 aa11.03□□□□□ -0.64
CIRBP-242ENST00000593093 PDE6HQ13956 83 aa11.03□□□□□ -0.64
CIRBP-242ENST00000593093 Q1RN00 199 aa11.03□□□□□ -0.64
CIRBP-242ENST00000593093 FANCD2OSQ96PS1 177 aa11.03□□□□□ -0.64
CIRBP-242ENST00000593093 AGPAT4-IT1Q9H0P7 198 aa11.03□□□□□ -0.64
CIRBP-242ENST00000593093 CEACAM4O75871 244 aa11.02□□□□□ -0.64
CIRBP-242ENST00000593093 IGLC6P0CF74 106 aa11.02□□□□□ -0.64
CIRBP-242ENST00000593093 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.64
CIRBP-242ENST00000593093 PHLDA1Q8WV24 401 aaPredicted RBP11.02□□□□□ -0.64
CIRBP-242ENST00000593093 RPL39LQ96EH5 51 aaKnown RBP11.02□□□□□ -0.64
CIRBP-242ENST00000593093 RAX2Q96IS3 184 aa11.02□□□□□ -0.64
CIRBP-242ENST00000593093 C16orf92Q96LL3 132 aa11.02□□□□□ -0.64
CIRBP-242ENST00000593093 TM2D2Q9BX73 214 aa11.02□□□□□ -0.64
CIRBP-242ENST00000593093 HIGD1BQ9P298 99 aa11.02□□□□□ -0.64
CIRBP-242ENST00000593093 C11orf21Q9P2W6 132 aa11.02□□□□□ -0.64
CIRBP-242ENST00000593093 IGKV3D-20A0A0C4DH25 116 aa11.02□□□□□ -0.65
CIRBP-242ENST00000593093 CSPG4Q6UVK1 2322 aa11.02□□□□□ -0.65
CIRBP-242ENST00000593093 MYMXA0A1B0GTQ4 84 aa11.02□□□□□ -0.65
CIRBP-242ENST00000593093 TNFRSF18Q9Y5U5 241 aa11.02□□□□□ -0.65
CIRBP-242ENST00000593093 SMAD5-AS1Q9Y6J3 95 aa11.02□□□□□ -0.65
CIRBP-242ENST00000593093 A0A087WX48 190 aa11.01□□□□□ -0.65
CIRBP-242ENST00000593093 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.01□□□□□ -0.65
CIRBP-242ENST00000593093 MRPS12O15235 138 aaKnown RBP11.01□□□□□ -0.65
CIRBP-242ENST00000593093 CD3EP07766 207 aa11.01□□□□□ -0.65
CIRBP-242ENST00000593093 PHLDA3Q9Y5J5 127 aa11.01□□□□□ -0.65
CIRBP-242ENST00000593093 H7C1H1 209 aa11.01□□□□□ -0.65
CIRBP-242ENST00000593093 FAM57AQ8TBR7 257 aa11.01□□□□□ -0.65
CIRBP-242ENST00000593093 CACNA1AO00555 2505 aa11.01□□□□□ -0.65
CIRBP-242ENST00000593093 LINC01548A6NM66 108 aa11.01□□□□□ -0.65
CIRBP-242ENST00000593093 IGF1P05019 195 aa11.01□□□□□ -0.65
CIRBP-242ENST00000593093 CTSGP08311 255 aa11□□□□□ -0.65
CIRBP-242ENST00000593093 DLX4Q92988 240 aaPredicted RBP11□□□□□ -0.65
CIRBP-242ENST00000593093 UBTD1Q9HAC8 227 aa11□□□□□ -0.65
CIRBP-242ENST00000593093 SNCGO76070 127 aa11□□□□□ -0.65
CIRBP-242ENST00000593093 MRPL23Q16540 153 aaKnown RBP11□□□□□ -0.65
CIRBP-242ENST00000593093 PLEKHB2Q96CS7 222 aa11□□□□□ -0.65
CIRBP-242ENST00000593093 G3V318 75 aa11□□□□□ -0.65
CIRBP-242ENST00000593093 TRBV6-1A0A0K0K1D8 114 aa10.99□□□□□ -0.65
CIRBP-242ENST00000593093 F8VRH5 84 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms