RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 LINC01559Q495D7 138 aa10.59□□□□□ -0.71
NPC1-207ENST00000588867 TMEM242Q9NWH2 141 aa10.59□□□□□ -0.71
NPC1-207ENST00000588867 MGAM2Q2M2H8 2515 aa10.59□□□□□ -0.71
NPC1-207ENST00000588867 APOC4P55056 127 aa10.58□□□□□ -0.72
NPC1-207ENST00000588867 TCL1AP56279 114 aa10.58□□□□□ -0.72
NPC1-207ENST00000588867 KPRPQ5T749 579 aaPredicted RBP10.58□□□□□ -0.72
NPC1-207ENST00000588867 CBLN2Q8IUK8 224 aa10.58□□□□□ -0.72
NPC1-207ENST00000588867 URGCP-MRPS24S4R325 110 aa10.58□□□□□ -0.72
NPC1-207ENST00000588867 XKRY2A2RUG3 117 aa10.58□□□□□ -0.72
NPC1-207ENST00000588867 TSKUQ8WUA8 353 aa10.58□□□□□ -0.72
NPC1-207ENST00000588867 IL36BQ9NZH7 164 aa10.58□□□□□ -0.72
NPC1-207ENST00000588867 NOTCH1P46531 2555 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 IGHV1OR15-1A0A075B7D0 117 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 GNRH2O43555 120 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 PRM2P04554 102 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 FAM3BP58499 235 aaPredicted RBP10.57□□□□□ -0.72
NPC1-207ENST00000588867 RPS20P60866 119 aaKnown RBP10.57□□□□□ -0.72
NPC1-207ENST00000588867 CT83Q5H943 113 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 C1orf158Q8N1D5 194 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 KCNS1Q96KK3 526 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 C20orf144Q9BQM9 153 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 KIR2DL5BA0A0G2JN68 375 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 KIR2DL5BA0A0G2JPC4 375 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 KIR2DL5AQ8N109 375 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 KIR2DL5BQ8NHK3 375 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 TPPP3Q9BW30 176 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 SMCO4Q9NRQ5 59 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 TP53TG3Q9ULZ0 132 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 GOLT1BQ9Y3E0 138 aa10.57□□□□□ -0.72
NPC1-207ENST00000588867 CBY3A6NI87 242 aa10.56□□□□□ -0.72
NPC1-207ENST00000588867 S100PP25815 95 aa10.56□□□□□ -0.72
NPC1-207ENST00000588867 DEFB121Q5J5C9 76 aa10.56□□□□□ -0.72
NPC1-207ENST00000588867 ZNF575Q86XF7 245 aa10.56□□□□□ -0.72
NPC1-207ENST00000588867 CSNK1G2-AS1Q8NCQ2 148 aa10.56□□□□□ -0.72
NPC1-207ENST00000588867 GTSF1Q8WW33 167 aa10.56□□□□□ -0.72
NPC1-207ENST00000588867 NEU1Q99519 415 aa10.56□□□□□ -0.72
NPC1-207ENST00000588867 PYGO2Q9BRQ0 406 aa10.56□□□□□ -0.72
NPC1-207ENST00000588867 SMIM27A0A1W2PRY6 76 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 CXorf65A6NEN9 183 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 A8MZ25 164 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 TYMSP04818 313 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 FRMD6-AS1P0C7T7 363 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 KCNIP4Q6PIL6 250 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 TMEM256Q8N2U0 113 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 TIMM8BQ9Y5J9 83 aaPredicted RBP10.55□□□□□ -0.72
NPC1-207ENST00000588867 HIGD1CA8MV81 97 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
NPC1-207ENST00000588867 SSTP61278 116 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 TDRG1Q3Y452 100 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 PGLYRP4Q96LB8 373 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 NAT8BQ9UHF3 227 aa10.55□□□□□ -0.72
NPC1-207ENST00000588867 K7EIL1 84 aa10.54□□□□□ -0.72
NPC1-207ENST00000588867 SPINK4O60575 86 aa10.54□□□□□ -0.72
NPC1-207ENST00000588867 ASIPP42127 132 aa10.54□□□□□ -0.72
NPC1-207ENST00000588867 DEFB135Q30KP9 77 aa10.54□□□□□ -0.72
NPC1-207ENST00000588867 IMMP2LQ96T52 175 aa10.54□□□□□ -0.72
NPC1-207ENST00000588867 GFRA4Q9GZZ7 299 aa10.54□□□□□ -0.72
NPC1-207ENST00000588867 A0A1W2PPQ1 181 aa10.53□□□□□ -0.72
NPC1-207ENST00000588867 FER1L6-AS1Q8NA97 138 aa10.53□□□□□ -0.72
NPC1-207ENST00000588867 NUP35Q8NFH5 326 aa10.53□□□□□ -0.72
NPC1-207ENST00000588867 NBEAL1Q6ZS30 2694 aa10.53□□□□□ -0.72
NPC1-207ENST00000588867 MUC21A0A0G2JKD1 596 aa10.53□□□□□ -0.72
NPC1-207ENST00000588867 MUC21A0A140T8X8 626 aa10.53□□□□□ -0.72
NPC1-207ENST00000588867 FAM231BA6NCW3 169 aa10.53□□□□□ -0.72
NPC1-207ENST00000588867 H3BVH4 76 aa10.53□□□□□ -0.72
NPC1-207ENST00000588867 UBE2CO00762 179 aa10.53□□□□□ -0.72
NPC1-207ENST00000588867 MDFICQ9P1T7 246 aa10.53□□□□□ -0.72
NPC1-207ENST00000588867 TRGV11A0A075B6L2 103 aa10.52□□□□□ -0.73
NPC1-207ENST00000588867 ARMS2P0C7Q2 107 aa10.52□□□□□ -0.73
NPC1-207ENST00000588867 ELOBQ15370 118 aa10.52□□□□□ -0.73
NPC1-207ENST00000588867 LYZL1Q6UWQ5 148 aa10.52□□□□□ -0.73
NPC1-207ENST00000588867 SPRY2O43597 315 aa10.51□□□□□ -0.73
NPC1-207ENST00000588867 AZU1P20160 251 aa10.51□□□□□ -0.73
NPC1-207ENST00000588867 FOXA3P55318 350 aaPredicted RBP10.51□□□□□ -0.73
NPC1-207ENST00000588867 ZNF705AQ6ZN79 300 aaPredicted RBP10.51□□□□□ -0.73
NPC1-207ENST00000588867 TGIF2-C20orf24A0A0A6YYL0 155 aa10.51□□□□□ -0.73
NPC1-207ENST00000588867 IGHV3-16A0A0C4DH30 117 aa10.51□□□□□ -0.73
NPC1-207ENST00000588867 CXCL1P09341 107 aa10.51□□□□□ -0.73
NPC1-207ENST00000588867 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
NPC1-207ENST00000588867 RCHY1Q96PM5 261 aa10.51□□□□□ -0.73
NPC1-207ENST00000588867 LINC00467Q9BRT7 94 aa10.51□□□□□ -0.73
NPC1-207ENST00000588867 RNASE3P12724 160 aaKnown RBP10.5□□□□□ -0.73
NPC1-207ENST00000588867 BORCS7Q96B45 105 aa10.5□□□□□ -0.73
NPC1-207ENST00000588867 RRN3P1Q2M238 152 aa10.5□□□□□ -0.73
NPC1-207ENST00000588867 DNLZQ5SXM8 178 aa10.5□□□□□ -0.73
NPC1-207ENST00000588867 MRPL54Q6P161 138 aaKnown RBP10.5□□□□□ -0.73
NPC1-207ENST00000588867 Q6ZWC4 215 aa10.5□□□□□ -0.73
NPC1-207ENST00000588867 BTF3L4Q96K17 158 aa10.5□□□□□ -0.73
NPC1-207ENST00000588867 GSN-AS1Q9NRJ2 163 aa10.5□□□□□ -0.73
NPC1-207ENST00000588867 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
NPC1-207ENST00000588867 F2Z2F3 143 aa10.49□□□□□ -0.73
NPC1-207ENST00000588867 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.49□□□□□ -0.73
NPC1-207ENST00000588867 OR11H2Q8NH07 326 aa10.49□□□□□ -0.73
NPC1-207ENST00000588867 MRAPQ8TCY5 172 aa10.49□□□□□ -0.73
NPC1-207ENST00000588867 A0A1B0GUT8 65 aa10.48□□□□□ -0.73
NPC1-207ENST00000588867 OR5AL1P0C617 328 aa10.48□□□□□ -0.73
NPC1-207ENST00000588867 ZNF415Q09FC8 603 aa10.48□□□□□ -0.73
NPC1-207ENST00000588867 OR10AG1Q8NH19 301 aa10.48□□□□□ -0.73
NPC1-207ENST00000588867 RNF183Q96D59 192 aa10.48□□□□□ -0.73
NPC1-207ENST00000588867 YPEL4Q96NS1 127 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms