RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 OR2D3Q8NGH3 330 aa16.48■□□□□ 0.23
ACTN4-210ENST00000588618 KCNS1Q96KK3 526 aa16.48■□□□□ 0.23
ACTN4-210ENST00000588618 RCHY1Q96PM5 261 aa16.48■□□□□ 0.23
ACTN4-210ENST00000588618 IGHV1OR15-1A0A075B7D0 117 aa16.47■□□□□ 0.23
ACTN4-210ENST00000588618 RNF212Q495C1 297 aa16.47■□□□□ 0.23
ACTN4-210ENST00000588618 Q6ZWC4 215 aa16.47■□□□□ 0.23
ACTN4-210ENST00000588618 ZNF575Q86XF7 245 aa16.47■□□□□ 0.23
ACTN4-210ENST00000588618 C1orf158Q8N1D5 194 aa16.47■□□□□ 0.23
ACTN4-210ENST00000588618 CSNK1G2-AS1Q8NCQ2 148 aa16.47■□□□□ 0.23
ACTN4-210ENST00000588618 RPP21Q9H633 154 aaKnown RBP16.47■□□□□ 0.23
ACTN4-210ENST00000588618 XKRY2A2RUG3 117 aa16.46■□□□□ 0.23
ACTN4-210ENST00000588618 PPP1R2P9O14990 202 aa16.46■□□□□ 0.23
ACTN4-210ENST00000588618 S100A1P23297 94 aa16.46■□□□□ 0.23
ACTN4-210ENST00000588618 RPL19P84098 196 aaKnown RBP16.46■□□□□ 0.23
ACTN4-210ENST00000588618 RHEBQ15382 184 aa16.46■□□□□ 0.23
ACTN4-210ENST00000588618 LINC01559Q495D7 138 aa16.46■□□□□ 0.23
ACTN4-210ENST00000588618 TMSB15BA0A087X1C1 80 aa16.45■□□□□ 0.22
ACTN4-210ENST00000588618 C7orf77A4D0Y5 90 aa16.45■□□□□ 0.22
ACTN4-210ENST00000588618 CBY3A6NI87 242 aa16.45■□□□□ 0.22
ACTN4-210ENST00000588618 ANXA2RQ3ZCQ2 193 aa16.45■□□□□ 0.22
ACTN4-210ENST00000588618 ANAPC16Q96DE5 110 aa16.45■□□□□ 0.22
ACTN4-210ENST00000588618 IGKV3D-20A0A0C4DH25 116 aa16.44■□□□□ 0.22
ACTN4-210ENST00000588618 RPS20P60866 119 aaKnown RBP16.44■□□□□ 0.22
ACTN4-210ENST00000588618 RPS10P5Q9NQ39 176 aa16.44■□□□□ 0.22
ACTN4-210ENST00000588618 V9GYV3 84 aa16.44■□□□□ 0.22
ACTN4-210ENST00000588618 DEFA6Q01524 100 aa16.43■□□□□ 0.22
ACTN4-210ENST00000588618 TDRG1Q3Y452 100 aa16.43■□□□□ 0.22
ACTN4-210ENST00000588618 ZNF705AQ6ZN79 300 aaPredicted RBP16.43■□□□□ 0.22
ACTN4-210ENST00000588618 DNAH9Q9NYC9 4486 aa16.42■□□□□ 0.22
ACTN4-210ENST00000588618 TRGV11A0A075B6L2 103 aa16.42■□□□□ 0.22
ACTN4-210ENST00000588618 A8MWL6 223 aa16.42■□□□□ 0.22
ACTN4-210ENST00000588618 PRM2P04554 102 aa16.42■□□□□ 0.22
ACTN4-210ENST00000588618 S100A4P26447 101 aaKnown RBP16.42■□□□□ 0.22
ACTN4-210ENST00000588618 CT83Q5H943 113 aa16.42■□□□□ 0.22
ACTN4-210ENST00000588618 SPRY2O43597 315 aa16.41■□□□□ 0.22
ACTN4-210ENST00000588618 RRN3P1Q2M238 152 aa16.41■□□□□ 0.22
ACTN4-210ENST00000588618 RNF183Q96D59 192 aa16.41■□□□□ 0.22
ACTN4-210ENST00000588618 LINC00467Q9BRT7 94 aa16.41■□□□□ 0.22
ACTN4-210ENST00000588618 CTDSP1Q9GZU7 261 aa16.41■□□□□ 0.22
ACTN4-210ENST00000588618 MEGF8Q7Z7M0 2845 aa16.4■□□□□ 0.22
ACTN4-210ENST00000588618 GRIFINA4D1Z8 144 aa16.4■□□□□ 0.22
ACTN4-210ENST00000588618 TYMSP04818 313 aa16.4■□□□□ 0.22
ACTN4-210ENST00000588618 ASIPP42127 132 aa16.4■□□□□ 0.22
ACTN4-210ENST00000588618 OR11H2Q8NH07 326 aa16.4■□□□□ 0.22
ACTN4-210ENST00000588618 HUWE1Q7Z6Z7 4374 aaKnown RBP16.4■□□□□ 0.22
ACTN4-210ENST00000588618 PRKDCP78527 4128 aaKnown RBP16.4■□□□□ 0.22
ACTN4-210ENST00000588618 GNRH2O43555 120 aa16.39■□□□□ 0.21
ACTN4-210ENST00000588618 GZMBP10144 247 aa16.39■□□□□ 0.21
ACTN4-210ENST00000588618 SBSPONQ8IVN8 264 aa16.39■□□□□ 0.21
ACTN4-210ENST00000588618 TP53TG3Q9ULZ0 132 aa16.39■□□□□ 0.21
ACTN4-210ENST00000588618 TP53TG1Q9Y2A0 90 aa16.39■□□□□ 0.21
ACTN4-210ENST00000588618 A0A087WWC5 75 aa16.38■□□□□ 0.21
ACTN4-210ENST00000588618 SMIM9A6NGZ8 99 aa16.38■□□□□ 0.21
ACTN4-210ENST00000588618 TSKUQ8WUA8 353 aa16.38■□□□□ 0.21
ACTN4-210ENST00000588618 TPPP3Q9BW30 176 aa16.38■□□□□ 0.21
ACTN4-210ENST00000588618 NEU1Q99519 415 aa16.37■□□□□ 0.21
ACTN4-210ENST00000588618 SPATA25Q9BR10 227 aa16.37■□□□□ 0.21
ACTN4-210ENST00000588618 TIMM8BQ9Y5J9 83 aaPredicted RBP16.37■□□□□ 0.21
ACTN4-210ENST00000588618 CXCL1P09341 107 aa16.36■□□□□ 0.21
ACTN4-210ENST00000588618 ZNF415Q09FC8 603 aa16.36■□□□□ 0.21
ACTN4-210ENST00000588618 TMEM263Q8WUH6 116 aaKnown RBP16.36■□□□□ 0.21
ACTN4-210ENST00000588618 C16orf74Q96GX8 76 aa16.36■□□□□ 0.21
ACTN4-210ENST00000588618 TMEM242Q9NWH2 141 aa16.36■□□□□ 0.21
ACTN4-210ENST00000588618 TENM3Q9P273 2699 aa16.36■□□□□ 0.21
ACTN4-210ENST00000588618 SCO1O75880 301 aa16.36■□□□□ 0.21
ACTN4-210ENST00000588618 GFRA4Q9GZZ7 299 aa16.36■□□□□ 0.21
ACTN4-210ENST00000588618 A0A1W2PPQ1 181 aa16.35■□□□□ 0.21
ACTN4-210ENST00000588618 H3BVH4 76 aa16.35■□□□□ 0.21
ACTN4-210ENST00000588618 TCL1AP56279 114 aa16.35■□□□□ 0.21
ACTN4-210ENST00000588618 ZNF493Q6ZR52 646 aa16.35■□□□□ 0.21
ACTN4-210ENST00000588618 FER1L6-AS1Q8NA97 138 aa16.35■□□□□ 0.21
ACTN4-210ENST00000588618 GTSF1Q8WW33 167 aa16.35■□□□□ 0.21
ACTN4-210ENST00000588618 OVOL2Q9BRP0 275 aa16.35■□□□□ 0.21
ACTN4-210ENST00000588618 IL36BQ9NZH7 164 aa16.35■□□□□ 0.21
ACTN4-210ENST00000588618 X6R8D5 127 aa16.35■□□□□ 0.21
ACTN4-210ENST00000588618 IGHV3-16A0A0C4DH30 117 aa16.34■□□□□ 0.21
ACTN4-210ENST00000588618 AZU1P20160 251 aa16.34■□□□□ 0.21
ACTN4-210ENST00000588618 ZMAT4Q9H898 229 aa16.34■□□□□ 0.21
ACTN4-210ENST00000588618 RETNQ9HD89 108 aa16.34■□□□□ 0.21
ACTN4-210ENST00000588618 MUC4Q99102 2169 aa16.34■□□□□ 0.21
ACTN4-210ENST00000588618 FAM231BA6NCW3 169 aa16.33■□□□□ 0.21
ACTN4-210ENST00000588618 SNURFLB1AK76 121 aa16.33■□□□□ 0.21
ACTN4-210ENST00000588618 MIFP14174 115 aa16.33■□□□□ 0.21
ACTN4-210ENST00000588618 KCNIP4Q6PIL6 250 aa16.33■□□□□ 0.21
ACTN4-210ENST00000588618 RNASE8Q8TDE3 154 aaKnown RBP16.33■□□□□ 0.21
ACTN4-210ENST00000588618 MDFICQ9P1T7 246 aa16.33■□□□□ 0.21
ACTN4-210ENST00000588618 NAT8BQ9UHF3 227 aa16.33■□□□□ 0.21
ACTN4-210ENST00000588618 HIGD1CA8MV81 97 aa16.33■□□□□ 0.2
ACTN4-210ENST00000588618 ARMS2P0C7Q2 107 aa16.33■□□□□ 0.2
ACTN4-210ENST00000588618 S100PP25815 95 aa16.33■□□□□ 0.2
ACTN4-210ENST00000588618 B9D2Q9BPU9 175 aa16.33■□□□□ 0.2
ACTN4-210ENST00000588618 DNLZQ5SXM8 178 aa16.32■□□□□ 0.2
ACTN4-210ENST00000588618 BORCS7Q96B45 105 aa16.32■□□□□ 0.2
ACTN4-210ENST00000588618 TM2D3Q9BRN9 247 aa16.32■□□□□ 0.2
ACTN4-210ENST00000588618 GSN-AS1Q9NRJ2 163 aa16.32■□□□□ 0.2
ACTN4-210ENST00000588618 PHLDA3Q9Y5J5 127 aa16.32■□□□□ 0.2
ACTN4-210ENST00000588618 SMIM27A0A1W2PRY6 76 aa16.31■□□□□ 0.2
ACTN4-210ENST00000588618 IGLC6P0CF74 106 aa16.31■□□□□ 0.2
ACTN4-210ENST00000588618 RNASE3P12724 160 aaKnown RBP16.31■□□□□ 0.2
ACTN4-210ENST00000588618 EMP1P54849 157 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms