RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 C7orf71A4D174 169 aa7.78□□□□□ -1.16
CHMP1B-202ENST00000588284 IGKV3-20P01619 116 aa7.78□□□□□ -1.16
CHMP1B-202ENST00000588284 NUTF2P61970 127 aaKnown RBP7.78□□□□□ -1.16
CHMP1B-202ENST00000588284 ODF3L2Q3SX64 289 aa7.78□□□□□ -1.16
CHMP1B-202ENST00000588284 FAM159AQ6UWV7 190 aa7.78□□□□□ -1.16
CHMP1B-202ENST00000588284 AMTNQ6UX39 209 aa7.78□□□□□ -1.16
CHMP1B-202ENST00000588284 GTSF1Q8WW33 167 aa7.78□□□□□ -1.16
CHMP1B-202ENST00000588284 GNB1LQ9BYB4 327 aa7.78□□□□□ -1.16
CHMP1B-202ENST00000588284 TRAPPC1Q9Y5R8 145 aa7.78□□□□□ -1.16
CHMP1B-202ENST00000588284 IGKV3D-20A0A0C4DH25 116 aa7.77□□□□□ -1.17
CHMP1B-202ENST00000588284 A0A1B0GUT8 65 aa7.77□□□□□ -1.17
CHMP1B-202ENST00000588284 TMEM238LA0A1B0GVL6 79 aa7.77□□□□□ -1.17
CHMP1B-202ENST00000588284 J3KRW8 73 aa7.77□□□□□ -1.17
CHMP1B-202ENST00000588284 SPINK4O60575 86 aa7.77□□□□□ -1.17
CHMP1B-202ENST00000588284 GZMBP10144 247 aa7.77□□□□□ -1.17
CHMP1B-202ENST00000588284 FER1L6-AS1Q8NA97 138 aa7.77□□□□□ -1.17
CHMP1B-202ENST00000588284 C20orf144Q9BQM9 153 aa7.77□□□□□ -1.17
CHMP1B-202ENST00000588284 ZMAT5Q9UDW3 170 aaKnown RBP7.77□□□□□ -1.17
CHMP1B-202ENST00000588284 TMA7Q9Y2S6 64 aaKnown RBP7.77□□□□□ -1.17
CHMP1B-202ENST00000588284 TRAV12-3A0A0B4J271 114 aa7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 EIF4EBP3O60516 100 aaPredicted RBP7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 ZNF324O75467 553 aaPredicted RBP7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 HLA-DQA1P01909 254 aa7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 TRGC2P03986 189 aa7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 IGLC6P0CF74 106 aa7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 RAB4BP61018 213 aa7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 HBBP68871 147 aa7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 SPINK13Q1W4C9 94 aa7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 DNLZQ5SXM8 178 aa7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 PRR9Q5T870 116 aa7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 MRPL54Q6P161 138 aaKnown RBP7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 LYZL1Q6UWQ5 148 aa7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 GTSCR1Q86UQ5 136 aa7.76□□□□□ -1.17
CHMP1B-202ENST00000588284 FBN1P35555 2871 aaKnown RBP7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 GRIFINA4D1Z8 144 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 SNURFLB1AK76 121 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 CD7P09564 240 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 MED14OSP0DP75 135 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 S100A4P26447 101 aaKnown RBP7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 ASIPP42127 132 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 CACNG7P62955 275 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 TDRG1Q3Y452 100 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 ANXA2RQ3ZCQ2 193 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 GFI1BQ5VTD9 330 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 MORN3Q6PF18 240 aaPredicted RBP7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 TRPT1Q86TN4 253 aaKnown RBP7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 FRZBQ92765 325 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 TPPP3Q9BW30 176 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 SSBP4Q9BWG4 385 aaPredicted RBP7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 MRPL18Q9H0U6 180 aaKnown RBP7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 C11orf21Q9P2W6 132 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 NAGKQ9UJ70 344 aa7.75□□□□□ -1.17
CHMP1B-202ENST00000588284 WNK1Q9H4A3 2382 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 IGHV1OR15-1A0A075B7D0 117 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 A0A1B0GXF2 115 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 M0R2Z0 102 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 OR5AL1P0C617 328 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 CTRLP40313 264 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 CAMPP49913 170 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 FABP9Q0Z7S8 132 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 ZNF124Q15973 351 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 TMEM136Q6ZRR5 245 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 C1QTNF4Q9BXJ3 329 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 C19orf73Q9NVV2 129 aa7.74□□□□□ -1.17
CHMP1B-202ENST00000588284 TRGV11A0A075B6L2 103 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 TRAV12-2A0A075B6T6 113 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 SNAI2O43623 268 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 APCSP02743 223 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 S100A6P06703 90 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 ARMS2P0C7Q2 107 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 IGLL1P15814 213 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 KIR3DS1Q14943 382 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 PRR31Q5SQ13 230 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 MUC21Q5SSG8 566 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 SMIM15Q7Z3B0 74 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 ZNF575Q86XF7 245 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 TMEM256Q8N2U0 113 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 GATD1Q8NB37 220 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 SPATA3Q8NHX4 192 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 LINC00467Q9BRT7 94 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 CNFNQ9BYD5 112 aa7.73□□□□□ -1.17
CHMP1B-202ENST00000588284 IGHV4-4A0A075B6R2 117 aa7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 RBMY1BA6NDE4 496 aaKnown RBP7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 RBMY1EA6NEQ0 496 aaKnown RBP7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 CRXO43186 299 aaPredicted RBP7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 GNRH2O43555 120 aa7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 INSP01308 110 aa7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 RBMY1DP0C7P1 496 aaKnown RBP7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 TRGC1P0CF51 173 aa7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 NTF3P20783 257 aa7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 FXYD7P58549 80 aa7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 TWIST1Q15672 202 aa7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 SPANXN1Q5VSR9 72 aa7.72□□□□□ -1.17
CHMP1B-202ENST00000588284 SORL1Q92673 2214 aa7.71□□□□□ -1.17
CHMP1B-202ENST00000588284 PHOX2AO14813 284 aa7.71□□□□□ -1.18
CHMP1B-202ENST00000588284 FRMD6-AS1P0C7T7 363 aa7.71□□□□□ -1.18
CHMP1B-202ENST00000588284 Q6ZQT7 251 aa7.71□□□□□ -1.18
CHMP1B-202ENST00000588284 ZNF493Q6ZR52 646 aa7.71□□□□□ -1.18
CHMP1B-202ENST00000588284 ZFP82Q8N141 532 aa7.71□□□□□ -1.18
CHMP1B-202ENST00000588284 LINC01587Q99440 93 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms