RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 JMJD1CQ15652 2540 aa11.04□□□□□ -0.64
CDK5RAP3-218ENST00000580391 TRAV21A0A0B4J279 112 aa11.03□□□□□ -0.64
CDK5RAP3-218ENST00000580391 KLLNB2CW77 178 aa11.03□□□□□ -0.64
CDK5RAP3-218ENST00000580391 ZNF124Q15973 351 aa11.03□□□□□ -0.64
CDK5RAP3-218ENST00000580391 FOXI2Q6ZQN5 318 aa11.03□□□□□ -0.64
CDK5RAP3-218ENST00000580391 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-218ENST00000580391 KNCNA6PVL3 124 aa11.03□□□□□ -0.64
CDK5RAP3-218ENST00000580391 NDUFA11Q86Y39 141 aa11.03□□□□□ -0.64
CDK5RAP3-218ENST00000580391 MAP6D1Q9H9H5 199 aa11.03□□□□□ -0.64
CDK5RAP3-218ENST00000580391 TENM1Q9UKZ4 2725 aa11.03□□□□□ -0.64
CDK5RAP3-218ENST00000580391 TMEM256Q8N2U0 113 aa11.02□□□□□ -0.65
CDK5RAP3-218ENST00000580391 ODF3Q96PU9 254 aa11.02□□□□□ -0.65
CDK5RAP3-218ENST00000580391 SPAG8Q99932 426 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-218ENST00000580391 SIGLEC8Q9NYZ4 499 aa11.02□□□□□ -0.65
CDK5RAP3-218ENST00000580391 ZNF256Q9Y2P7 627 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-218ENST00000580391 MAST4O15021 2626 aa11.02□□□□□ -0.65
CDK5RAP3-218ENST00000580391 M0R2Z0 102 aa11.01□□□□□ -0.65
CDK5RAP3-218ENST00000580391 LINC00310P59036 64 aa11.01□□□□□ -0.65
CDK5RAP3-218ENST00000580391 GATD1Q8NB37 220 aa11.01□□□□□ -0.65
CDK5RAP3-218ENST00000580391 A0A1B0GW15 77 aa11.01□□□□□ -0.65
CDK5RAP3-218ENST00000580391 OR4C46A6NHA9 309 aa11.01□□□□□ -0.65
CDK5RAP3-218ENST00000580391 NUPR1O60356 82 aa11.01□□□□□ -0.65
CDK5RAP3-218ENST00000580391 SAP30O75446 220 aa11.01□□□□□ -0.65
CDK5RAP3-218ENST00000580391 DUSP14O95147 198 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-218ENST00000580391 LEPP41159 167 aa11.01□□□□□ -0.65
CDK5RAP3-218ENST00000580391 ANXA2RQ3ZCQ2 193 aa11.01□□□□□ -0.65
CDK5RAP3-218ENST00000580391 TEP1Q99973 2627 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-218ENST00000580391 TRAV12-2A0A075B6T6 113 aa11□□□□□ -0.65
CDK5RAP3-218ENST00000580391 TRAV25A0A0B4J276 109 aa11□□□□□ -0.65
CDK5RAP3-218ENST00000580391 S100A8P05109 93 aa11□□□□□ -0.65
CDK5RAP3-218ENST00000580391 SPINK13Q1W4C9 94 aa11□□□□□ -0.65
CDK5RAP3-218ENST00000580391 AMTNQ6UX39 209 aa11□□□□□ -0.65
CDK5RAP3-218ENST00000580391 CNFNQ9BYD5 112 aa11□□□□□ -0.65
CDK5RAP3-218ENST00000580391 TRAV12-3A0A0B4J271 114 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 C7orf71A4D174 169 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 H3BVH4 76 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 HLA-DRB4P13762 266 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 FABP4P15090 132 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 NTF3P20783 257 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 S100A2P29034 98 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 IQCJQ1A5X6 159 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 ALKBH7Q9BT30 221 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 MSRB1Q9NZV6 116 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 HLA-DRB4X5D2U9 266 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 LOC102724200A0A096LPH7 203 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 SERF1AO75920 110 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 Q0VG73 95 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 TWIST1Q15672 202 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 ODF3L2Q3SX64 289 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 ZNF493Q6ZR52 646 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 OR10AG1Q8NH19 301 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 C18orf32Q8TCD1 76 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 HIST1H2BLQ99880 126 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 ATRQ13535 2644 aa10.99□□□□□ -0.65
CDK5RAP3-218ENST00000580391 RBMY1BA6NDE4 496 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-218ENST00000580391 RBMY1EA6NEQ0 496 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-218ENST00000580391 AMBPP02760 352 aa10.98□□□□□ -0.65
CDK5RAP3-218ENST00000580391 PF4P02776 101 aa10.98□□□□□ -0.65
CDK5RAP3-218ENST00000580391 RBMY1DP0C7P1 496 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-218ENST00000580391 CDKN1BP46527 198 aa10.98□□□□□ -0.65
CDK5RAP3-218ENST00000580391 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
CDK5RAP3-218ENST00000580391 RCHY1Q96PM5 261 aa10.98□□□□□ -0.65
CDK5RAP3-218ENST00000580391 H3BMM0 161 aa10.97□□□□□ -0.65
CDK5RAP3-218ENST00000580391 SNAI2O43623 268 aa10.97□□□□□ -0.65
CDK5RAP3-218ENST00000580391 FXYD7P58549 80 aa10.97□□□□□ -0.65
CDK5RAP3-218ENST00000580391 OR10J3Q5JRS4 329 aa10.97□□□□□ -0.65
CDK5RAP3-218ENST00000580391 TIMM8BQ9Y5J9 83 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-218ENST00000580391 MUC4Q99102 2169 aa10.97□□□□□ -0.65
CDK5RAP3-218ENST00000580391 VWFP04275 2813 aa10.97□□□□□ -0.65
CDK5RAP3-218ENST00000580391 A8MTW9 85 aa10.97□□□□□ -0.65
CDK5RAP3-218ENST00000580391 ZNF324O75467 553 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-218ENST00000580391 OR5AL1P0C617 328 aa10.97□□□□□ -0.65
CDK5RAP3-218ENST00000580391 AMN1Q8IY45 258 aa10.97□□□□□ -0.65
CDK5RAP3-218ENST00000580391 GNRH2O43555 120 aa10.96□□□□□ -0.65
CDK5RAP3-218ENST00000580391 SPRY2O43597 315 aa10.96□□□□□ -0.65
CDK5RAP3-218ENST00000580391 IGLV1-51P01701 117 aa10.96□□□□□ -0.65
CDK5RAP3-218ENST00000580391 TSPOP30536 169 aa10.96□□□□□ -0.65
CDK5RAP3-218ENST00000580391 ASIPP42127 132 aa10.96□□□□□ -0.65
CDK5RAP3-218ENST00000580391 LINC00482Q8N8I6 264 aa10.96□□□□□ -0.65
CDK5RAP3-218ENST00000580391 OR10D4PQ8NGN7 298 aa10.96□□□□□ -0.65
CDK5RAP3-218ENST00000580391 S100A4P26447 101 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-218ENST00000580391 FAM104BQ5XKR9 115 aa10.95□□□□□ -0.66
CDK5RAP3-218ENST00000580391 FAM159AQ6UWV7 190 aa10.95□□□□□ -0.66
CDK5RAP3-218ENST00000580391 PACRGQ96M98 296 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-218ENST00000580391 RBMY1A1P0DJD3 496 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-218ENST00000580391 RBMY1CP0DJD4 496 aa10.94□□□□□ -0.66
CDK5RAP3-218ENST00000580391 ESDP10768 282 aa10.94□□□□□ -0.66
CDK5RAP3-218ENST00000580391 RNASE3P12724 160 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-218ENST00000580391 RBMY1FQ15415 496 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-218ENST00000580391 LINC00518Q8N0U6 118 aa10.94□□□□□ -0.66
CDK5RAP3-218ENST00000580391 TMEM191AQ9H0A3 160 aa10.94□□□□□ -0.66
CDK5RAP3-218ENST00000580391 CRXO43186 299 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-218ENST00000580391 SPANXN1Q5VSR9 72 aa10.94□□□□□ -0.66
CDK5RAP3-218ENST00000580391 SPATA3Q8NHX4 192 aa10.94□□□□□ -0.66
CDK5RAP3-218ENST00000580391 MRPL51Q4U2R6 128 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-218ENST00000580391 TMEM18Q96B42 140 aa10.93□□□□□ -0.66
CDK5RAP3-218ENST00000580391 KCNS1Q96KK3 526 aa10.93□□□□□ -0.66
CDK5RAP3-218ENST00000580391 CITED1Q99966 193 aa10.93□□□□□ -0.66
CDK5RAP3-218ENST00000580391 OR11H12B2RN74 326 aa10.92□□□□□ -0.66
CDK5RAP3-218ENST00000580391 D6R8Y8 96 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1451.2 ms