RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 F6UB75 175 aa10.65□□□□□ -0.7
TRAPPC8-207ENST00000580104 PTPN13Q12923 2485 aa10.65□□□□□ -0.7
TRAPPC8-207ENST00000580104 ATG2AQ2TAZ0 1938 aa10.65□□□□□ -0.7
TRAPPC8-207ENST00000580104 Q8N7P7 452 aa10.65□□□□□ -0.7
TRAPPC8-207ENST00000580104 C11orf44Q8N8P7 122 aa10.65□□□□□ -0.7
TRAPPC8-207ENST00000580104 KNCNA6PVL3 124 aa10.65□□□□□ -0.71
TRAPPC8-207ENST00000580104 TNRC6AQ8NDV7 1962 aaKnown RBP10.65□□□□□ -0.71
TRAPPC8-207ENST00000580104 A0A1W2PRX2 142 aa10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 SPATA12Q7Z6I5 190 aa10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 SHISA9B4DS77 424 aa10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 TLN1Q9Y490 2541 aaKnown RBP10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 A0A087WX48 190 aa10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 TEX22C9J3V5 150 aa10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 LAMA2P24043 3122 aaKnown RBP10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 MKI67P46013 3256 aaKnown RBP10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 CUL9Q8IWT3 2517 aa10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 SDHAF1A6NFY7 115 aa10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 PRAC2D3DTV9 90 aa10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 MBD6Q96DN6 1003 aa10.64□□□□□ -0.71
TRAPPC8-207ENST00000580104 COPS9Q8WXC6 57 aa10.63□□□□□ -0.71
TRAPPC8-207ENST00000580104 TRAV12-2A0A075B6T6 113 aa10.63□□□□□ -0.71
TRAPPC8-207ENST00000580104 TRBV7-9A0A0J9YWB2 115 aa10.63□□□□□ -0.71
TRAPPC8-207ENST00000580104 WFDC2Q14508 124 aa10.63□□□□□ -0.71
TRAPPC8-207ENST00000580104 KLK9Q9UKQ9 250 aa10.63□□□□□ -0.71
TRAPPC8-207ENST00000580104 OTOGLQ3ZCN5 2332 aa10.63□□□□□ -0.71
TRAPPC8-207ENST00000580104 C22orf34Q6ZV56 151 aa10.63□□□□□ -0.71
TRAPPC8-207ENST00000580104 C8orf31Q8N9H6 132 aa10.63□□□□□ -0.71
TRAPPC8-207ENST00000580104 PHLDA1Q8WV24 401 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC8-207ENST00000580104 ZNF625Q96I27 306 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC8-207ENST00000580104 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 GNRH2O43555 120 aa10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 PRSS22Q9GZN4 317 aa10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 HTTP42858 3142 aa10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 PRSS29PA6NIE9 313 aa10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 DUSP14O95147 198 aaKnown RBP10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 PLEKHB2Q96CS7 222 aa10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 SPINK13Q1W4C9 94 aa10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 TRAV8-3A0A0A6YYJ7 113 aa10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 C10orf142B7Z368 130 aa10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 PMVKQ15126 192 aa10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 BOD1L2Q8IYS8 172 aa10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 TMEM101Q96IK0 257 aa10.62□□□□□ -0.71
TRAPPC8-207ENST00000580104 PTPRSQ13332 1948 aa10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 UBE2E1P51965 193 aa10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 RPL39LQ96EH5 51 aaKnown RBP10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 DAZ1Q9NQZ3 744 aaKnown RBP10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 TRGV11A0A075B6L2 103 aa10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 IGLL5B9A064 214 aa10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 CTSGP08311 255 aa10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 MLST8Q9BVC4 326 aa10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 TIMM21Q9BVV7 248 aa10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 CHD7Q9P2D1 2997 aa10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 TRGV2A0A075B6R0 118 aa10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 IGFL2Q6UWQ7 119 aa10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 C1orf159Q96HA4 380 aa10.61□□□□□ -0.71
TRAPPC8-207ENST00000580104 TCF15Q12870 199 aa10.6□□□□□ -0.71
TRAPPC8-207ENST00000580104 SORL1Q92673 2214 aa10.6□□□□□ -0.71
TRAPPC8-207ENST00000580104 ADARB2-AS1A8MUL3 147 aa10.6□□□□□ -0.71
TRAPPC8-207ENST00000580104 ATXN8Q156A1 80 aa10.6□□□□□ -0.71
TRAPPC8-207ENST00000580104 KLHL30-AS1Q8NEE0 82 aa10.6□□□□□ -0.71
TRAPPC8-207ENST00000580104 FAM223BA6NKX1 122 aa10.6□□□□□ -0.71
TRAPPC8-207ENST00000580104 FAM223AQ8IWN6 122 aa10.6□□□□□ -0.71
TRAPPC8-207ENST00000580104 CRYGCP07315 174 aa10.6□□□□□ -0.71
TRAPPC8-207ENST00000580104 IGLV1-47P01700 117 aa10.59□□□□□ -0.71
TRAPPC8-207ENST00000580104 IGHV3-53P01767 116 aa10.59□□□□□ -0.71
TRAPPC8-207ENST00000580104 SYNJ2BPP57105 145 aa10.59□□□□□ -0.71
TRAPPC8-207ENST00000580104 INS-IGF2F8WCM5 200 aa10.59□□□□□ -0.71
TRAPPC8-207ENST00000580104 IGLV11-55A0A075B6I3 123 aa10.59□□□□□ -0.71
TRAPPC8-207ENST00000580104 FGF6P10767 208 aa10.59□□□□□ -0.71
TRAPPC8-207ENST00000580104 DEFB1P60022 68 aa10.59□□□□□ -0.71
TRAPPC8-207ENST00000580104 YAE1D1Q9NRH1 226 aa10.59□□□□□ -0.71
TRAPPC8-207ENST00000580104 PPDPFLQ8WWR9 84 aa10.59□□□□□ -0.71
TRAPPC8-207ENST00000580104 RBX1P62877 108 aa10.58□□□□□ -0.72
TRAPPC8-207ENST00000580104 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
TRAPPC8-207ENST00000580104 USMG5Q96IX5 58 aa10.58□□□□□ -0.72
TRAPPC8-207ENST00000580104 ATP6V0BQ99437 205 aa10.58□□□□□ -0.72
TRAPPC8-207ENST00000580104 COX6B1P14854 86 aa10.58□□□□□ -0.72
TRAPPC8-207ENST00000580104 TAL2Q16559 108 aa10.58□□□□□ -0.72
TRAPPC8-207ENST00000580104 CPAMD8Q8IZJ3 1885 aa10.58□□□□□ -0.72
TRAPPC8-207ENST00000580104 LRP4O75096 1905 aa10.58□□□□□ -0.72
TRAPPC8-207ENST00000580104 TRAV13-1A0A0B4J241 112 aa10.58□□□□□ -0.72
TRAPPC8-207ENST00000580104 ATRXP46100 2492 aa10.57□□□□□ -0.72
TRAPPC8-207ENST00000580104 IGHV7-81A0A0B4J1V7 117 aa10.57□□□□□ -0.72
TRAPPC8-207ENST00000580104 ZNF80P51504 273 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC8-207ENST00000580104 PRO1854Q9UHT4 67 aa10.57□□□□□ -0.72
TRAPPC8-207ENST00000580104 RANBP2P49792 3224 aaKnown RBP10.57□□□□□ -0.72
TRAPPC8-207ENST00000580104 FOXI2Q6ZQN5 318 aa10.57□□□□□ -0.72
TRAPPC8-207ENST00000580104 LAMA3Q16787 3333 aa10.57□□□□□ -0.72
TRAPPC8-207ENST00000580104 ODF1Q14990 250 aa10.57□□□□□ -0.72
TRAPPC8-207ENST00000580104 PIP4P2Q8N4L2 257 aa10.57□□□□□ -0.72
TRAPPC8-207ENST00000580104 OR11H6Q8NGC7 330 aa10.57□□□□□ -0.72
TRAPPC8-207ENST00000580104 IGF2RP11717 2491 aa10.57□□□□□ -0.72
TRAPPC8-207ENST00000580104 J3QQQ9 107 aa10.56□□□□□ -0.72
TRAPPC8-207ENST00000580104 TRBV20-1A0A075B6N2 111 aa10.56□□□□□ -0.72
TRAPPC8-207ENST00000580104 IGHV3-16A0A0C4DH30 117 aa10.56□□□□□ -0.72
TRAPPC8-207ENST00000580104 STHQ8IWL8 128 aa10.56□□□□□ -0.72
TRAPPC8-207ENST00000580104 LY6G5BQ8NDX9 201 aa10.56□□□□□ -0.72
TRAPPC8-207ENST00000580104 ARHGAP32A7KAX9 2087 aa10.56□□□□□ -0.72
TRAPPC8-207ENST00000580104 BUB3O43684 328 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms