RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 IFI27L1Q96BM0 104 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 MAP1AP78559 2803 aaPredicted RBP4.11□□□□□ -1.75
VAPA-203ENST00000577539 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 TRAV40A0A0B4J280 105 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 CRXO43186 299 aaPredicted RBP4.11□□□□□ -1.75
VAPA-203ENST00000577539 BUB3O43684 328 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 SPANXN1Q5VSR9 72 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 ZNF48Q96MX3 618 aaPredicted RBP4.11□□□□□ -1.75
VAPA-203ENST00000577539 AP1S3Q96PC3 154 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 AGPAT4-IT1Q9H0P7 198 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 CENPVL3A0A0U1RRI6 287 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 CCL25O15444 150 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 RAB9AP51151 201 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 EBI3Q14213 229 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 LINC01545Q5VT33 79 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 ORAOV1Q8WV07 137 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 TRAV41A0A0B4J266 112 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 C19orf84I3L1E1 186 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 GAS8-AS1O95177 125 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 S100A4P26447 101 aaKnown RBP4.1□□□□□ -1.75
VAPA-203ENST00000577539 LEPP41159 167 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 LMO4P61968 165 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 SLC50A1Q9BRV3 221 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 MS4A6AQ9H2W1 248 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 SORL1Q92673 2214 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 FBLL1A6NHQ2 334 aaKnown RBP4.1□□□□□ -1.75
VAPA-203ENST00000577539 F5H697 171 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 IGHG4P01861 327 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 DEFB1P60022 68 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 BVES-AS1Q5T3Y7 98 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 ZNF493Q6ZR52 646 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 TMEM190Q8WZ59 177 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 SCRT2Q9NQ03 307 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 DCHS2Q6V1P9 2916 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 OVOL3O00110 214 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 HIST1H1AQ02539 215 aaPredicted RBP4.1□□□□□ -1.75
VAPA-203ENST00000577539 PAX8Q06710 450 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 UBE2V1Q13404 147 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 LCNL1Q6ZST4 164 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 STHQ8IWL8 128 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 NRGNQ92686 78 aa4.1□□□□□ -1.75
VAPA-203ENST00000577539 NAA38Q9BRA0 125 aaKnown RBP4.1□□□□□ -1.75
VAPA-203ENST00000577539 TRAV26-1A0A087WT03 109 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 TRAV26-2A0A0B4J265 109 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 C7orf71A4D174 169 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 H3BVH4 76 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 FOXE3Q13461 319 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 Q6ZQT7 251 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 PKD1L2Q7Z442 2459 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 A0A096LNJ9 63 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 M0R381 172 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 IGLC6P0CF74 106 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 COX8AP10176 69 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 SRD5A1P18405 259 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 AMMECR1LQ6DCA0 310 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 RAB37Q96AX2 223 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 FOXC2Q99958 501 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 KLK15Q9H2R5 256 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 MOB4Q9Y3A3 225 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 NOTCH3Q9UM47 2321 aa4.09□□□□□ -1.75
VAPA-203ENST00000577539 ASH1LQ9NR48 2969 aaKnown RBP4.09□□□□□ -1.75
VAPA-203ENST00000577539 TRBV7-1A0A0A6YYK4 115 aa4.09□□□□□ -1.76
VAPA-203ENST00000577539 TMEM8BA6NDV4 472 aa4.09□□□□□ -1.76
VAPA-203ENST00000577539 TRBV12-3P01733 135 aa4.09□□□□□ -1.76
VAPA-203ENST00000577539 IGHV4-39P01824 125 aa4.09□□□□□ -1.76
VAPA-203ENST00000577539 PPBPP02775 128 aa4.09□□□□□ -1.76
VAPA-203ENST00000577539 ATP5J2P56134 94 aa4.09□□□□□ -1.76
VAPA-203ENST00000577539 SEC61GP60059 68 aa4.09□□□□□ -1.76
VAPA-203ENST00000577539 TMEM97Q5BJF2 176 aa4.09□□□□□ -1.76
VAPA-203ENST00000577539 C5orf56Q8N8D9 126 aa4.09□□□□□ -1.76
VAPA-203ENST00000577539 ITLN2Q8WWU7 325 aaPredicted RBP4.09□□□□□ -1.76
VAPA-203ENST00000577539 C11orf21Q9P2W6 132 aa4.09□□□□□ -1.76
VAPA-203ENST00000577539 ZFYVE26Q68DK2 2539 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 MYO18BQ8IUG5 2567 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 IGKV3D-20A0A0C4DH25 116 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 IGHV4-61A0A0C4DH41 118 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 CLPSL1A2RUU4 121 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 H3BUX3 64 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 TMEM158Q8WZ71 300 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 POLQO75417 2590 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 USP9XQ93008 2570 aaPredicted RBP4.08□□□□□ -1.76
VAPA-203ENST00000577539 TAX1BP3O14907 124 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 MGPP08493 103 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 LGALS9BQ3B8N2 356 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 LGALS9CQ6DKI2 356 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 PCP2Q8IVA1 136 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 GATD1Q8NB37 220 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 OR10J6PQ8NGY7 276 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 HRNRQ86YZ3 2850 aaPredicted RBP4.08□□□□□ -1.76
VAPA-203ENST00000577539 IGHV1-69DA0A0B4J2H0 117 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 F6UB75 175 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 TRIAP1O43715 76 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 IGHV1-69P01742 117 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 IGF1P05019 195 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 IGHV4-38-2P0DP08 117 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 UNQ9165/PRO28630Q6UXU0 137 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 DEFB104AQ8WTQ1 72 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 RNF185Q96GF1 192 aa4.08□□□□□ -1.76
VAPA-203ENST00000577539 CCL19Q99731 98 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms