RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 K7EIL1 84 aa11.25□□□□□ -0.61
HERPUD1-219ENST00000570273 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
HERPUD1-219ENST00000570273 FAM159AQ6UWV7 190 aa11.25□□□□□ -0.61
HERPUD1-219ENST00000570273 CTDSP1Q9GZU7 261 aa11.25□□□□□ -0.61
HERPUD1-219ENST00000570273 GOLT1BQ9Y3E0 138 aa11.25□□□□□ -0.61
HERPUD1-219ENST00000570273 DNAH3Q8TD57 4116 aa11.24□□□□□ -0.61
HERPUD1-219ENST00000570273 IGHV3OR16-12A0A075B7B8 117 aa11.24□□□□□ -0.61
HERPUD1-219ENST00000570273 IGHV1OR15-1A0A075B7D0 117 aa11.24□□□□□ -0.61
HERPUD1-219ENST00000570273 A0A087WWC5 75 aa11.24□□□□□ -0.61
HERPUD1-219ENST00000570273 RPS20P60866 119 aaKnown RBP11.24□□□□□ -0.61
HERPUD1-219ENST00000570273 CT83Q5H943 113 aa11.24□□□□□ -0.61
HERPUD1-219ENST00000570273 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
HERPUD1-219ENST00000570273 TMEM256Q8N2U0 113 aa11.24□□□□□ -0.61
HERPUD1-219ENST00000570273 LINC01587Q99440 93 aa11.24□□□□□ -0.61
HERPUD1-219ENST00000570273 IGKV3D-20A0A0C4DH25 116 aa11.23□□□□□ -0.61
HERPUD1-219ENST00000570273 XKRY2A2RUG3 117 aa11.23□□□□□ -0.61
HERPUD1-219ENST00000570273 FRMD6-AS1P0C7T7 363 aa11.23□□□□□ -0.61
HERPUD1-219ENST00000570273 KCNS1Q96KK3 526 aa11.23□□□□□ -0.61
HERPUD1-219ENST00000570273 GRIFINA4D1Z8 144 aa11.22□□□□□ -0.61
HERPUD1-219ENST00000570273 A8MWL6 223 aa11.22□□□□□ -0.61
HERPUD1-219ENST00000570273 UBE2CO00762 179 aa11.22□□□□□ -0.61
HERPUD1-219ENST00000570273 GZMBP10144 247 aa11.22□□□□□ -0.61
HERPUD1-219ENST00000570273 HTN1P15515 57 aa11.22□□□□□ -0.61
HERPUD1-219ENST00000570273 TCL1AP56279 114 aa11.22□□□□□ -0.61
HERPUD1-219ENST00000570273 PYGO2Q9BRQ0 406 aa11.22□□□□□ -0.61
HERPUD1-219ENST00000570273 CBY3A6NI87 242 aa11.21□□□□□ -0.61
HERPUD1-219ENST00000570273 TYMSP04818 313 aa11.21□□□□□ -0.61
HERPUD1-219ENST00000570273 DEFB135Q30KP9 77 aa11.21□□□□□ -0.61
HERPUD1-219ENST00000570273 CSNK1G2-AS1Q8NCQ2 148 aa11.21□□□□□ -0.61
HERPUD1-219ENST00000570273 TSKUQ8WUA8 353 aa11.21□□□□□ -0.61
HERPUD1-219ENST00000570273 IL36BQ9NZH7 164 aa11.21□□□□□ -0.61
HERPUD1-219ENST00000570273 TRGV11A0A075B6L2 103 aa11.2□□□□□ -0.62
HERPUD1-219ENST00000570273 SCO1O75880 301 aa11.2□□□□□ -0.62
HERPUD1-219ENST00000570273 ASIPP42127 132 aa11.2□□□□□ -0.62
HERPUD1-219ENST00000570273 TDRG1Q3Y452 100 aa11.2□□□□□ -0.62
HERPUD1-219ENST00000570273 LINC00467Q9BRT7 94 aa11.2□□□□□ -0.62
HERPUD1-219ENST00000570273 GNRH2O43555 120 aa11.19□□□□□ -0.62
HERPUD1-219ENST00000570273 CXCL1P09341 107 aa11.19□□□□□ -0.62
HERPUD1-219ENST00000570273 S100A4P26447 101 aaKnown RBP11.19□□□□□ -0.62
HERPUD1-219ENST00000570273 DEFB121Q5J5C9 76 aa11.19□□□□□ -0.62
HERPUD1-219ENST00000570273 CBLN2Q8IUK8 224 aa11.19□□□□□ -0.62
HERPUD1-219ENST00000570273 NEU1Q99519 415 aa11.19□□□□□ -0.62
HERPUD1-219ENST00000570273 TPPP3Q9BW30 176 aa11.19□□□□□ -0.62
HERPUD1-219ENST00000570273 TMEM242Q9NWH2 141 aa11.19□□□□□ -0.62
HERPUD1-219ENST00000570273 TP53TG3Q9ULZ0 132 aa11.19□□□□□ -0.62
HERPUD1-219ENST00000570273 H3BVH4 76 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 S100PP25815 95 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 TMEM88Q6PEY1 159 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 KCNIP4Q6PIL6 250 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 ZNF705AQ6ZN79 300 aaPredicted RBP11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 RCHY1Q96PM5 261 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 GFRA4Q9GZZ7 299 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 SMCO4Q9NRQ5 59 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 TIMM8BQ9Y5J9 83 aaPredicted RBP11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 SMIM27A0A1W2PRY6 76 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 Q6ZWC4 215 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 FER1L6-AS1Q8NA97 138 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 GTSF1Q8WW33 167 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 NAT8BQ9UHF3 227 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 URGCP-MRPS24S4R325 110 aa11.18□□□□□ -0.62
HERPUD1-219ENST00000570273 IGHV3-16A0A0C4DH30 117 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 A0A1W2PPQ1 181 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 FAM231BA6NCW3 169 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 CXorf65A6NEN9 183 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 HIGD1CA8MV81 97 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 PRM2P04554 102 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 IGLC6P0CF74 106 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 FAM3BP58499 235 aaPredicted RBP11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 ZNF415Q09FC8 603 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 RRN3P1Q2M238 152 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 ZNF575Q86XF7 245 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 MRAPQ8TCY5 172 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 PGLYRP4Q96LB8 373 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 IMMP2LQ96T52 175 aa11.17□□□□□ -0.62
HERPUD1-219ENST00000570273 RNF183Q96D59 192 aa11.16□□□□□ -0.62
HERPUD1-219ENST00000570273 MDFICQ9P1T7 246 aa11.16□□□□□ -0.62
HERPUD1-219ENST00000570273 SPRY2O43597 315 aa11.15□□□□□ -0.62
HERPUD1-219ENST00000570273 ARMS2P0C7Q2 107 aa11.15□□□□□ -0.62
HERPUD1-219ENST00000570273 MED14OSP0DP75 135 aa11.15□□□□□ -0.62
HERPUD1-219ENST00000570273 AZU1P20160 251 aa11.15□□□□□ -0.62
HERPUD1-219ENST00000570273 CTRLP40313 264 aa11.15□□□□□ -0.62
HERPUD1-219ENST00000570273 DNLZQ5SXM8 178 aa11.15□□□□□ -0.62
HERPUD1-219ENST00000570273 LYZL1Q6UWQ5 148 aa11.15□□□□□ -0.62
HERPUD1-219ENST00000570273 NUP35Q8NFH5 326 aa11.15□□□□□ -0.62
HERPUD1-219ENST00000570273 TMEM263Q8WUH6 116 aaKnown RBP11.15□□□□□ -0.62
HERPUD1-219ENST00000570273 RETNQ9HD89 108 aa11.15□□□□□ -0.62
HERPUD1-219ENST00000570273 X6R8D5 127 aa11.15□□□□□ -0.62
HERPUD1-219ENST00000570273 RNASE3P12724 160 aaKnown RBP11.14□□□□□ -0.63
HERPUD1-219ENST00000570273 OR11H2Q8NH07 326 aa11.14□□□□□ -0.63
HERPUD1-219ENST00000570273 BORCS7Q96B45 105 aa11.14□□□□□ -0.63
HERPUD1-219ENST00000570273 C16orf74Q96GX8 76 aa11.14□□□□□ -0.63
HERPUD1-219ENST00000570273 C9orf85Q96MD7 179 aa11.14□□□□□ -0.63
HERPUD1-219ENST00000570273 GSN-AS1Q9NRJ2 163 aa11.14□□□□□ -0.63
HERPUD1-219ENST00000570273 MUC21A0A0G2JKD1 596 aa11.13□□□□□ -0.63
HERPUD1-219ENST00000570273 MUC21A0A140T8X8 626 aa11.13□□□□□ -0.63
HERPUD1-219ENST00000570273 SNAI2O43623 268 aa11.13□□□□□ -0.63
HERPUD1-219ENST00000570273 SPINK4O60575 86 aa11.13□□□□□ -0.63
HERPUD1-219ENST00000570273 OR5AL1P0C617 328 aa11.13□□□□□ -0.63
HERPUD1-219ENST00000570273 FOXA3P55318 350 aaPredicted RBP11.13□□□□□ -0.63
HERPUD1-219ENST00000570273 SBSPONQ8IVN8 264 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms