RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 BRWD1-AS2P59051 145 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 UBE2G2P60604 165 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 COTL1Q14019 142 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 TNXAQ16473 311 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 TTC9CQ8N5M4 171 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 ZNRF2Q8NHG8 242 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 C5orf30Q96GV9 206 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 DERL1Q9BUN8 251 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 ENY2Q9NPA8 101 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 NAT8BQ9UHF3 227 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 IGHV3-35A0A0C4DH35 117 aa7.94□□□□□ -1.14
CDH3-208ENST00000569036 GRIFINA4D1Z8 144 aa7.94□□□□□ -1.14
CDH3-208ENST00000569036 K7EN84 100 aa7.94□□□□□ -1.14
CDH3-208ENST00000569036 HYPMO75409 117 aa7.94□□□□□ -1.14
CDH3-208ENST00000569036 FUSP35637 526 aaKnown RBP eCLIP7.94□□□□□ -1.14
CDH3-208ENST00000569036 CDKN1BP46527 198 aa7.94□□□□□ -1.14
CDH3-208ENST00000569036 PCP4P48539 62 aa7.94□□□□□ -1.14
CDH3-208ENST00000569036 KRTDAPP60985 99 aa7.94□□□□□ -1.14
CDH3-208ENST00000569036 UBE2V1Q13404 147 aa7.94□□□□□ -1.14
CDH3-208ENST00000569036 MORN3Q6PF18 240 aaPredicted RBP7.94□□□□□ -1.14
CDH3-208ENST00000569036 HARBI1Q96MB7 349 aa7.94□□□□□ -1.14
CDH3-208ENST00000569036 ST20Q9HBF5 79 aa7.94□□□□□ -1.14
CDH3-208ENST00000569036 ZNF331Q9NQX6 463 aaPredicted RBP7.94□□□□□ -1.14
CDH3-208ENST00000569036 PRNDQ9UKY0 176 aa7.94□□□□□ -1.14
CDH3-208ENST00000569036 YTHDF2Q9Y5A9 579 aaKnown RBP7.94□□□□□ -1.14
CDH3-208ENST00000569036 PKHD1L1Q86WI1 4243 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 TRAV9-2A0A087WT02 112 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 A0A1W2PS18 150 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 INS-IGF2F8WCM5 200 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 APCSP02743 223 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 CMC4P56277 68 aaPredicted RBP7.93□□□□□ -1.14
CDH3-208ENST00000569036 HSPE1P61604 102 aaKnown RBP7.93□□□□□ -1.14
CDH3-208ENST00000569036 CENPWQ5EE01 88 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 CT83Q5H943 113 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 MIC13Q5XKP0 118 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 Q6ZN92 141 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 OR8I2Q8N0Y5 310 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 EEF1AKMT3Q96AZ1 226 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 TMEM14BQ9NUH8 114 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 COX11Q9Y6N1 276 aa7.93□□□□□ -1.14
CDH3-208ENST00000569036 TRAV30A0A087WSZ9 112 aa7.92□□□□□ -1.14
CDH3-208ENST00000569036 LINC00473A8K010 186 aa7.92□□□□□ -1.14
CDH3-208ENST00000569036 PPBPP02775 128 aa7.92□□□□□ -1.14
CDH3-208ENST00000569036 OR5AL1P0C617 328 aa7.92□□□□□ -1.14
CDH3-208ENST00000569036 TSPOP30536 169 aa7.92□□□□□ -1.14
CDH3-208ENST00000569036 TFPI2P48307 235 aa7.92□□□□□ -1.14
CDH3-208ENST00000569036 IBA57Q5T440 356 aaKnown RBP7.92□□□□□ -1.14
CDH3-208ENST00000569036 IGF2BP2-AS1Q96M15 143 aa7.92□□□□□ -1.14
CDH3-208ENST00000569036 DAZ1Q9NQZ3 744 aaKnown RBP7.92□□□□□ -1.14
CDH3-208ENST00000569036 TMEM140Q9NV12 185 aa7.92□□□□□ -1.14
CDH3-208ENST00000569036 FAM231BA6NCW3 169 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 SRRM4A7MD48 611 aaKnown RBP7.91□□□□□ -1.14
CDH3-208ENST00000569036 CRXO43186 299 aaPredicted RBP7.91□□□□□ -1.14
CDH3-208ENST00000569036 CLEC3BP05452 202 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 C3orf79P0CE67 100 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 PTTG1IPP53801 180 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 KRTAP10-1P60331 282 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 HAMPP81172 84 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 C2orf83Q53S99 150 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 C10orf55Q5SWW7 151 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 NIT1Q86X76 327 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 STXBP6Q8NFX7 210 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 OR1L8Q8NGR8 309 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 CHCHD1Q96BP2 118 aaKnown RBP7.91□□□□□ -1.14
CDH3-208ENST00000569036 GRAMD2BQ96HH9 432 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 FANCD2OSQ96PS1 177 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 PMCHL2Q9BQD1 86 aa7.91□□□□□ -1.14
CDH3-208ENST00000569036 FCGR3BO75015 233 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 HSBP1O75506 76 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 HIST1H1EP10412 219 aaKnown RBP7.9□□□□□ -1.14
CDH3-208ENST00000569036 SRIP30626 198 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 GPR183P32249 361 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 UBE2G1P62253 170 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 PRCDQ00LT1 54 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 GCSAMLQ5JQS6 135 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 C15orf53Q8NAA6 179 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 OR1L4Q8NGR5 311 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 C18orf32Q8TCD1 76 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 TSKUQ8WUA8 353 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 PGPEP1Q9NXJ5 209 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 CLEC5AQ9NY25 188 aa7.9□□□□□ -1.14
CDH3-208ENST00000569036 TRBV7-1A0A0A6YYK4 115 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 IGLC7A0M8Q6 106 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 PGPEP1LA6NFU8 196 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 M0R1X1 148 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 SLC17A3O00476 420 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 BATFQ16520 125 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 SMIM15Q7Z3B0 74 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 STPG4Q8N801 248 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 TEX45Q8NA69 505 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 KRTAP1-5Q9BYS1 174 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 GFRA4Q9GZZ7 299 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 MS4A6AQ9H2W1 248 aa7.89□□□□□ -1.15
CDH3-208ENST00000569036 IGKV3-7A0A075B6H7 116 aa7.88□□□□□ -1.15
CDH3-208ENST00000569036 NPIPB5A8MRT5 1133 aa7.88□□□□□ -1.15
CDH3-208ENST00000569036 TEX22C9J3V5 150 aa7.88□□□□□ -1.15
CDH3-208ENST00000569036 IGLV2-8P01709 118 aa7.88□□□□□ -1.15
CDH3-208ENST00000569036 HTN3P15516 51 aa7.88□□□□□ -1.15
CDH3-208ENST00000569036 RBX1P62877 108 aa7.88□□□□□ -1.15
CDH3-208ENST00000569036 TDRG1Q3Y452 100 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms