RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 RNASE4P34096 147 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 CSN1S1P47710 185 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 DAZ2Q13117 558 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 PDE6HQ13956 83 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 TMEM78Q5T7P6 136 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 GFI1BQ5VTD9 330 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 ATRAIDQ6UW56 229 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 TMEM252Q8N6L7 170 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 ENKURQ8TC29 256 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 RXFP4Q8TDU9 374 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 ZNF586Q9NXT0 402 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 TMEM14CQ9P0S9 112 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 NAGKQ9UJ70 344 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 PAM16Q9Y3D7 125 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 LINC00588Q9Y4M8 146 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 TRGV1A0A0A0MS02 117 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 PRAC2D3DTV9 90 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 SIVA1O15304 175 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 NMBP08949 121 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 NBEAP1P0C6P0 100 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 RPL13AP40429 203 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 LINC00310P59036 64 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 ERCC8Q13216 396 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 ICAM4Q14773 271 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 MORN5Q5VZ52 161 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 LINC00299Q6ZSB3 139 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 EIF4E3Q8N5X7 224 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 OR5C1Q8NGR4 320 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 ZNRF2Q8NHG8 242 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 SCGB1C1Q8TD33 95 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 MAP1LC3CQ9BXW4 147 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 NPCDR1Q9BY65 106 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 MRPL32Q9BYC8 188 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 PARD6GQ9BYG4 376 aaPredicted RBP3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 OR51M1Q9H341 326 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 C11orf21Q9P2W6 132 aa3.25□□□□□ -1.89
HERPUD1-213ENST00000568358 TRAV9-2A0A087WT02 112 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 IGSF23A1L1A6 192 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 OR7C2O60412 319 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 ZNF324O75467 553 aaPredicted RBP3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 TSPAN13O95857 204 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 IFNA5P01569 189 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 PET100P0DJ07 73 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 PYYP10082 97 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 GATA1P15976 413 aaPredicted RBP3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 TAS2R45P59539 299 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 ASAH1Q13510 395 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 ESRGQ1W209 222 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 LRRC37A5PQ49AS3 106 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 FAM74A1Q5RGS3 127 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 C9orf47Q6ZRZ4 202 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 Q6ZTI0 123 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 LINC00518Q8N0U6 118 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 LYPD1Q8N2G4 141 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 EXOC3-AS1Q8N2X6 119 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 LINC00612Q8N6U2 182 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 C15orf54Q8N8G6 183 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 CMTM2Q8TAZ6 248 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 LINC00467Q9BRT7 94 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 UPK3BQ9BT76 320 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 PAXXQ9BUH6 204 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 NMES1Q9C002 83 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 AGPAT4-IT1Q9H0P7 198 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 TMPRSS5Q9H3S3 457 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 MSRB1Q9NZV6 116 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 ZNF492Q9P255 531 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 FUT9Q9Y231 359 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 ICOSQ9Y6W8 199 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 DNAH6Q9C0G6 4158 aa3.24□□□□□ -1.89
HERPUD1-213ENST00000568358 IGHV1OR15-1A0A075B7D0 117 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 IGKV2-40A0A087WW87 121 aaPredicted RBP3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 TRGV4A0A0C4DH28 118 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 TRBV7-9A0A0J9YWB2 115 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 RAB19A4D1S5 217 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 RBAKDNA6NC62 111 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 KLLNB2CW77 178 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 INMT-MINDY4F8WBC2 141 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 M0R3E3 92 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 SSNA1O43805 119 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 UPK1BO75841 260 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 CDK2AP2O75956 126 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 IGKV2D-40P01614 121 aaPredicted RBP3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 OR10J4P0C629 311 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 CRISP2P16562 243 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 HOXA5P20719 270 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 ZNF138P52744 262 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 TCL1AP56279 114 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 DEFA1P59665 94 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 DEFA3P59666 94 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 UBE2G2P60604 165 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 RANP62826 216 aaKnown RBP3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 CD300CQ08708 224 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 IL15RAQ13261 267 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 BTN1A1Q13410 526 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 SMUG1Q53HV7 270 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 KHDC3LQ587J8 217 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 IBA57Q5T440 356 aaKnown RBP3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 MIR17HGQ75NE6 70 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 SPATA12Q7Z6I5 190 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms