RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
VPS9D1-206ENST00000567379 CTRLP40313 264 aa8.1□□□□□ -1.11
VPS9D1-206ENST00000567379 DEFB131AP59861 70 aa8.1□□□□□ -1.11
VPS9D1-206ENST00000567379 GDF5OSQ5U4N7 250 aa8.1□□□□□ -1.11
VPS9D1-206ENST00000567379 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.1□□□□□ -1.11
VPS9D1-206ENST00000567379 C11orf21Q9P2W6 132 aa8.1□□□□□ -1.11
VPS9D1-206ENST00000567379 KLLNB2CW77 178 aa8.09□□□□□ -1.11
VPS9D1-206ENST00000567379 SAP30O75446 220 aa8.09□□□□□ -1.11
VPS9D1-206ENST00000567379 CMC4P56277 68 aaPredicted RBP8.09□□□□□ -1.11
VPS9D1-206ENST00000567379 COA6Q5JTJ3 125 aaKnown RBP8.09□□□□□ -1.11
VPS9D1-206ENST00000567379 OR2K2Q8NGT1 345 aa8.09□□□□□ -1.11
VPS9D1-206ENST00000567379 NAGKQ9UJ70 344 aa8.09□□□□□ -1.11
VPS9D1-206ENST00000567379 C7orf71A4D174 169 aa8.08□□□□□ -1.12
VPS9D1-206ENST00000567379 IGKV3-20P01619 116 aa8.08□□□□□ -1.12
VPS9D1-206ENST00000567379 HLA-DRB4P13762 266 aa8.08□□□□□ -1.12
VPS9D1-206ENST00000567379 S100A2P29034 98 aa8.08□□□□□ -1.12
VPS9D1-206ENST00000567379 AKR1D1P51857 326 aa8.08□□□□□ -1.12
VPS9D1-206ENST00000567379 SLAQ13239 276 aa8.08□□□□□ -1.12
VPS9D1-206ENST00000567379 KIAA1644Q3SXP7 199 aa8.08□□□□□ -1.12
VPS9D1-206ENST00000567379 GATD1Q8NB37 220 aa8.08□□□□□ -1.12
VPS9D1-206ENST00000567379 SSBP4Q9BWG4 385 aaPredicted RBP8.08□□□□□ -1.12
VPS9D1-206ENST00000567379 MAP6D1Q9H9H5 199 aa8.08□□□□□ -1.12
VPS9D1-206ENST00000567379 HLA-DRB4X5D2U9 266 aa8.08□□□□□ -1.12
VPS9D1-206ENST00000567379 KNCNA6PVL3 124 aa8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 SRIP30626 198 aa8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 ASIPP42127 132 aa8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 CDKN1BP46527 198 aa8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 CACNG7P62955 275 aa8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 Q0VG73 95 aa8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 TWIST1Q15672 202 aa8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 ANXA2RQ3ZCQ2 193 aa8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 OR10J3Q5JRS4 329 aa8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 BAGE3Q86Y29 109 aa8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 KCNS1Q96KK3 526 aa8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 ZNF256Q9Y2P7 627 aaPredicted RBP8.07□□□□□ -1.12
VPS9D1-206ENST00000567379 LOC102724200A0A096LPH7 203 aaPredicted RBP8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 TRAV12-3A0A0B4J271 114 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 A8MTW9 85 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 H3BMM0 161 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 IGLV1-51P01701 117 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 OR5AL1P0C617 328 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 MED14OSP0DP75 135 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 S100A4P26447 101 aaKnown RBP8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 SSTP61278 116 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 KIR3DS1Q14943 382 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 MUC21Q5SSG8 566 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 FAM159AQ6UWV7 190 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 Q6ZQT7 251 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 ZNF493Q6ZR52 646 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 ZNF575Q86XF7 245 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 HIST3H2BBQ8N257 126 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 CNFNQ9BYD5 112 aa8.06□□□□□ -1.12
VPS9D1-206ENST00000567379 MUC21A0A0G2JKD1 596 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 MUC21A0A140T8X8 626 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 OR11H12B2RN74 326 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 M0R2Z0 102 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 SNAI2O43623 268 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 NTF3P20783 257 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 SPINK13Q1W4C9 94 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 PDZD11Q5EBL8 140 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 DNLZQ5SXM8 178 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 GFI1BQ5VTD9 330 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 AMTNQ6UX39 209 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 SMIM15Q7Z3B0 74 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 LINC00482Q8N8I6 264 aa8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 ALKBH7Q9BT30 221 aaPredicted RBP8.05□□□□□ -1.12
VPS9D1-206ENST00000567379 MEGF8Q7Z7M0 2845 aa8.04□□□□□ -1.12
VPS9D1-206ENST00000567379 WNK1Q9H4A3 2382 aa8.04□□□□□ -1.12
VPS9D1-206ENST00000567379 H3BVH4 76 aa8.04□□□□□ -1.12
VPS9D1-206ENST00000567379 ZNF324O75467 553 aaPredicted RBP8.04□□□□□ -1.12
VPS9D1-206ENST00000567379 ODF3L2Q3SX64 289 aa8.04□□□□□ -1.12
VPS9D1-206ENST00000567379 SPANXN1Q5VSR9 72 aa8.04□□□□□ -1.12
VPS9D1-206ENST00000567379 FAM104BQ5XKR9 115 aa8.04□□□□□ -1.12
VPS9D1-206ENST00000567379 CLUHP3Q96NS8 147 aa8.04□□□□□ -1.12
VPS9D1-206ENST00000567379 CITED1Q99966 193 aa8.04□□□□□ -1.12
VPS9D1-206ENST00000567379 TMEM191AQ9H0A3 160 aa8.04□□□□□ -1.12
VPS9D1-206ENST00000567379 TIMM8BQ9Y5J9 83 aaPredicted RBP8.04□□□□□ -1.12
VPS9D1-206ENST00000567379 PKD1L1Q8TDX9 2849 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 NOTCH1P46531 2555 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 IGHV4-4A0A075B6R2 117 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 TRAV12-2A0A075B6T6 113 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 GNRH2O43555 120 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 AMBPP02760 352 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 ZNF124Q15973 351 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 TDRG1Q3Y452 100 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 STHQ8IWL8 128 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 TMEM256Q8N2U0 113 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 C18orf32Q8TCD1 76 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 TMEM18Q96B42 140 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 PHLDA3Q9Y5J5 127 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 TGP01266 2768 aa8.03□□□□□ -1.12
VPS9D1-206ENST00000567379 AGRNO00468 2067 aa8.02□□□□□ -1.12
VPS9D1-206ENST00000567379 IGHV1OR15-1A0A075B7D0 117 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 IFITM10A6NMD0 228 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 SERF1AO75920 110 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 CD7P09564 240 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 ESDP10768 282 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 FABP4P15090 132 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 INSL3P51460 131 aa8.02□□□□□ -1.13
VPS9D1-206ENST00000567379 FXYD7P58549 80 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms