RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 USP54Q70EL1 1684 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 A0A0G2JMM0 328 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 A0A1B0GX51 115 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 TMEM30CPA0ZSE6 113 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 ODAMA1E959 279 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 RBAKDNA6NC62 111 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 FAM25AB3EWG3 89 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 FAM25CB3EWG5 89 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 FAM25GB3EWG6 89 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 JMJD7-PLA2G4BH0Y9G9 81 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 EDF1O60869 148 aaKnown RBP0.44□□□□□ -2.34
CHD9-211ENST00000564600 SNCGO76070 127 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 HBDP02042 147 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 HMGN1P05114 100 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 PRB4P10163 310 aaPredicted RBP0.44□□□□□ -2.34
CHD9-211ENST00000564600 CCL4P13236 92 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 HLA-DRB4P13762 266 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 CRYGSP22914 178 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 RPS3P23396 243 aaKnown RBP eCLIP0.44□□□□□ -2.34
CHD9-211ENST00000564600 FOXA3P55318 350 aaPredicted RBP0.44□□□□□ -2.34
CHD9-211ENST00000564600 ARPC4P59998 168 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 COPZ1P61923 177 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 BLCAPP62952 87 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 SELENOWP63302 87 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 MRPS10P82664 201 aaKnown RBP0.44□□□□□ -2.34
CHD9-211ENST00000564600 ALX1Q15699 326 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 NEDD8Q15843 81 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 IZUMO2Q6UXV1 221 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 FOXI2Q6ZQN5 318 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 Q6ZS92 163 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 DEFB132Q7Z7B7 95 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 SBSPONQ8IVN8 264 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 C1orf54Q8WWF1 131 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 RMND5BQ96G75 393 aaPredicted RBP0.44□□□□□ -2.34
CHD9-211ENST00000564600 TPT1P8Q9HAU6 139 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 TAF9BQ9HBM6 251 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 BET1LQ9NYM9 111 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 TAS2R7Q9NYW3 318 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 JPT1Q9UK76 154 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 TRAPPC2LQ9UL33 140 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 MED31Q9Y3C7 131 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 HLA-DRB4X5D2U9 266 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 MUC4Q99102 2169 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 TRANK1O15050 2925 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 ABCA12Q86UK0 2595 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 TRAV12-2A0A075B6T6 113 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 TRAV36DV7A0A075B6V5 113 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 TRBV30A0A0K0K1B3 111 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 TEX49A0A1B0GTD5 131 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 EFCAB10A6NFE3 127 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 ZNF727A8MUV8 499 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 GABARAPH6UMI1 98 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 NCR2O95944 276 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 PPYP01298 95 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 IFNGP01579 166 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 NBEAP1P0C6P0 100 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 PDE6GP18545 87 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 POLR2HP52434 150 aaKnown RBP0.43□□□□□ -2.34
CHD9-211ENST00000564600 CAV3P56539 151 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 CKS1BP61024 79 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 MIR22HGQ0VDD5 57 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 KRTAP20-1Q3LI63 56 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 TMEM244Q5VVB8 128 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 Q6ZQY7 126 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 ATP6V0E2Q8NHE4 81 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 DYNLRB2Q8TF09 96 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 NAT14Q8WUY8 206 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 MRPL35Q9NZE8 188 aaKnown RBP0.43□□□□□ -2.34
CHD9-211ENST00000564600 MRPL36Q9P0J6 103 aaKnown RBP0.43□□□□□ -2.34
CHD9-211ENST00000564600 METTL1Q9UBP6 276 aaKnown RBP0.43□□□□□ -2.34
CHD9-211ENST00000564600 DISP2A7MBM2 1401 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 FLNAP21333 2647 aaKnown RBP0.43□□□□□ -2.34
CHD9-211ENST00000564600 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 ANKRD30AQ9BXX3 1397 aa0.43□□□□□ -2.34
CHD9-211ENST00000564600 SNRNP200O75643 2136 aaKnown RBP0.43□□□□□ -2.34
CHD9-211ENST00000564600 PTPRDP23468 1912 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 CITO14578 2027 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 MGAMO43451 1857 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 KDM5CP41229 1560 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 C9JAW5 83 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 F2Z2F3 143 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 ZNF670-ZNF695F2Z2N8 137 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 J3QLW9 94 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 NDUFB6O95139 128 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 TNFSF15O95150 251 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 TSPAN19P0C672 248 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 PYYP10082 97 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 SLC25A4P12235 298 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 RPL7P18124 248 aaKnown RBP0.42□□□□□ -2.34
CHD9-211ENST00000564600 AKR1D1P51857 326 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 EFNA4P52798 201 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 QRFPP83859 136 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 OR8B8Q15620 311 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 WHAMMP3Q1A5X7 153 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 MORN2Q502X0 79 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 OCIAD2Q56VL3 154 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 SPINK9Q5DT21 86 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 SPANXN1Q5VSR9 72 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 Q5XG85 94 aa0.42□□□□□ -2.34
CHD9-211ENST00000564600 C12orf73Q69YU5 71 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms