RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 IL36BQ9NZH7 164 aa12.33□□□□□ -0.44
SNX1-203ENST00000558040 IGHV1OR15-1A0A075B7D0 117 aa12.32□□□□□ -0.44
SNX1-203ENST00000558040 TMSB15BA0A087X1C1 80 aa12.32□□□□□ -0.44
SNX1-203ENST00000558040 IGKV3D-20A0A0C4DH25 116 aa12.32□□□□□ -0.44
SNX1-203ENST00000558040 UBE2CO00762 179 aa12.32□□□□□ -0.44
SNX1-203ENST00000558040 CXCL1P09341 107 aa12.32□□□□□ -0.44
SNX1-203ENST00000558040 GIG44P09565 113 aaPredicted RBP12.32□□□□□ -0.44
SNX1-203ENST00000558040 ANXA2RQ3ZCQ2 193 aa12.32□□□□□ -0.44
SNX1-203ENST00000558040 MUC21Q5SSG8 566 aa12.32□□□□□ -0.44
SNX1-203ENST00000558040 KCNIP4Q6PIL6 250 aa12.32□□□□□ -0.44
SNX1-203ENST00000558040 Q6ZQT7 251 aa12.32□□□□□ -0.44
SNX1-203ENST00000558040 GFRA4Q9GZZ7 299 aa12.32□□□□□ -0.44
SNX1-203ENST00000558040 C11orf21Q9P2W6 132 aa12.32□□□□□ -0.44
SNX1-203ENST00000558040 FAM231BA6NCW3 169 aa12.31□□□□□ -0.44
SNX1-203ENST00000558040 RBMY1A1P0DJD3 496 aaKnown RBP12.31□□□□□ -0.44
SNX1-203ENST00000558040 RBMY1CP0DJD4 496 aa12.31□□□□□ -0.44
SNX1-203ENST00000558040 RBMY1FQ15415 496 aaKnown RBP12.31□□□□□ -0.44
SNX1-203ENST00000558040 TDRG1Q3Y452 100 aa12.31□□□□□ -0.44
SNX1-203ENST00000558040 LINC01587Q99440 93 aa12.31□□□□□ -0.44
SNX1-203ENST00000558040 LINC00467Q9BRT7 94 aa12.31□□□□□ -0.44
SNX1-203ENST00000558040 SMIM27A0A1W2PRY6 76 aa12.3□□□□□ -0.44
SNX1-203ENST00000558040 ASIPP42127 132 aa12.3□□□□□ -0.44
SNX1-203ENST00000558040 NAT8BQ9UHF3 227 aa12.3□□□□□ -0.44
SNX1-203ENST00000558040 TRGV11A0A075B6L2 103 aa12.29□□□□□ -0.44
SNX1-203ENST00000558040 A0A1W2PPQ1 181 aa12.29□□□□□ -0.44
SNX1-203ENST00000558040 TMEM88Q6PEY1 159 aa12.29□□□□□ -0.44
SNX1-203ENST00000558040 C1orf158Q8N1D5 194 aa12.29□□□□□ -0.44
SNX1-203ENST00000558040 CSNK1G2-AS1Q8NCQ2 148 aa12.29□□□□□ -0.44
SNX1-203ENST00000558040 NEU1Q99519 415 aa12.29□□□□□ -0.44
SNX1-203ENST00000558040 IGHV3OR16-12A0A075B7B8 117 aa12.28□□□□□ -0.44
SNX1-203ENST00000558040 GRIFINA4D1Z8 144 aa12.28□□□□□ -0.44
SNX1-203ENST00000558040 CBY3A6NI87 242 aa12.28□□□□□ -0.44
SNX1-203ENST00000558040 SCO1O75880 301 aa12.28□□□□□ -0.44
SNX1-203ENST00000558040 TYMSP04818 313 aa12.28□□□□□ -0.44
SNX1-203ENST00000558040 GZMBP10144 247 aa12.28□□□□□ -0.44
SNX1-203ENST00000558040 S100A4P26447 101 aaKnown RBP12.28□□□□□ -0.44
SNX1-203ENST00000558040 TCL1AP56279 114 aa12.28□□□□□ -0.44
SNX1-203ENST00000558040 CBLN2Q8IUK8 224 aa12.28□□□□□ -0.44
SNX1-203ENST00000558040 FER1L6-AS1Q8NA97 138 aa12.28□□□□□ -0.44
SNX1-203ENST00000558040 TRAV9-1A0A075B6T8 112 aa12.27□□□□□ -0.45
SNX1-203ENST00000558040 HIGD1CA8MV81 97 aa12.27□□□□□ -0.45
SNX1-203ENST00000558040 FRMD6-AS1P0C7T7 363 aa12.27□□□□□ -0.45
SNX1-203ENST00000558040 HTN1P15515 57 aa12.27□□□□□ -0.45
SNX1-203ENST00000558040 DNLZQ5SXM8 178 aa12.27□□□□□ -0.45
SNX1-203ENST00000558040 BORCS7Q96B45 105 aa12.27□□□□□ -0.45
SNX1-203ENST00000558040 BTF3L4Q96K17 158 aa12.27□□□□□ -0.45
SNX1-203ENST00000558040 URGCP-MRPS24S4R325 110 aa12.27□□□□□ -0.45
SNX1-203ENST00000558040 GNRH2O43555 120 aa12.26□□□□□ -0.45
SNX1-203ENST00000558040 MED14OSP0DP75 135 aa12.26□□□□□ -0.45
SNX1-203ENST00000558040 FOXA3P55318 350 aaPredicted RBP12.26□□□□□ -0.45
SNX1-203ENST00000558040 FAM3BP58499 235 aaPredicted RBP12.26□□□□□ -0.45
SNX1-203ENST00000558040 ZNF705AQ6ZN79 300 aaPredicted RBP12.26□□□□□ -0.45
SNX1-203ENST00000558040 Q6ZWC4 215 aa12.26□□□□□ -0.45
SNX1-203ENST00000558040 GTSF1Q8WW33 167 aa12.26□□□□□ -0.45
SNX1-203ENST00000558040 TPPP3Q9BW30 176 aa12.26□□□□□ -0.45
SNX1-203ENST00000558040 F2Z2F3 143 aa12.25□□□□□ -0.45
SNX1-203ENST00000558040 K7EIL1 84 aa12.25□□□□□ -0.45
SNX1-203ENST00000558040 PRB2P02812 416 aaPredicted RBP12.25□□□□□ -0.45
SNX1-203ENST00000558040 IGLC6P0CF74 106 aa12.25□□□□□ -0.45
SNX1-203ENST00000558040 NUP35Q8NFH5 326 aa12.25□□□□□ -0.45
SNX1-203ENST00000558040 PGLYRP4Q96LB8 373 aa12.25□□□□□ -0.45
SNX1-203ENST00000558040 RCHY1Q96PM5 261 aa12.25□□□□□ -0.45
SNX1-203ENST00000558040 CMYA5Q8N3K9 4069 aa12.24□□□□□ -0.45
SNX1-203ENST00000558040 IGHV3-16A0A0C4DH30 117 aa12.24□□□□□ -0.45
SNX1-203ENST00000558040 H3BVH4 76 aa12.24□□□□□ -0.45
SNX1-203ENST00000558040 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
SNX1-203ENST00000558040 CTRLP40313 264 aa12.24□□□□□ -0.45
SNX1-203ENST00000558040 ZNF415Q09FC8 603 aa12.24□□□□□ -0.45
SNX1-203ENST00000558040 DEFB135Q30KP9 77 aa12.24□□□□□ -0.45
SNX1-203ENST00000558040 ZNF575Q86XF7 245 aa12.24□□□□□ -0.45
SNX1-203ENST00000558040 TP53TG3Q9ULZ0 132 aa12.24□□□□□ -0.45
SNX1-203ENST00000558040 SNAI2O43623 268 aa12.23□□□□□ -0.45
SNX1-203ENST00000558040 ARMS2P0C7Q2 107 aa12.23□□□□□ -0.45
SNX1-203ENST00000558040 ELOBQ15370 118 aa12.23□□□□□ -0.45
SNX1-203ENST00000558040 RRN3P1Q2M238 152 aa12.23□□□□□ -0.45
SNX1-203ENST00000558040 LYZL1Q6UWQ5 148 aa12.23□□□□□ -0.45
SNX1-203ENST00000558040 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
SNX1-203ENST00000558040 SSBP4Q9BWG4 385 aaPredicted RBP12.23□□□□□ -0.45
SNX1-203ENST00000558040 TIMM8BQ9Y5J9 83 aaPredicted RBP12.23□□□□□ -0.45
SNX1-203ENST00000558040 A0A1B0GUT8 65 aa12.22□□□□□ -0.45
SNX1-203ENST00000558040 SMIM9A6NGZ8 99 aa12.22□□□□□ -0.45
SNX1-203ENST00000558040 RNASE3P12724 160 aaKnown RBP12.22□□□□□ -0.45
SNX1-203ENST00000558040 CACNG7P62955 275 aa12.22□□□□□ -0.45
SNX1-203ENST00000558040 DEFB121Q5J5C9 76 aa12.22□□□□□ -0.45
SNX1-203ENST00000558040 ZNF493Q6ZR52 646 aa12.22□□□□□ -0.45
SNX1-203ENST00000558040 C16orf74Q96GX8 76 aa12.22□□□□□ -0.45
SNX1-203ENST00000558040 PHLDA3Q9Y5J5 127 aa12.22□□□□□ -0.45
SNX1-203ENST00000558040 TRBV24-1A0A075B6N3 115 aa12.21□□□□□ -0.45
SNX1-203ENST00000558040 RIGQ13278 110 aa12.21□□□□□ -0.45
SNX1-203ENST00000558040 WDR73Q6P4I2 378 aa12.21□□□□□ -0.45
SNX1-203ENST00000558040 ATP5L2Q7Z4Y8 100 aa12.21□□□□□ -0.45
SNX1-203ENST00000558040 RNF183Q96D59 192 aa12.21□□□□□ -0.45
SNX1-203ENST00000558040 C9orf85Q96MD7 179 aa12.21□□□□□ -0.45
SNX1-203ENST00000558040 YPEL4Q96NS1 127 aa12.21□□□□□ -0.45
SNX1-203ENST00000558040 SCRT2Q9NQ03 307 aa12.21□□□□□ -0.45
SNX1-203ENST00000558040 MDFICQ9P1T7 246 aa12.21□□□□□ -0.45
SNX1-203ENST00000558040 TP53TG1Q9Y2A0 90 aa12.21□□□□□ -0.45
SNX1-203ENST00000558040 PKD1L1Q8TDX9 2849 aa12.2□□□□□ -0.46
SNX1-203ENST00000558040 TGIF2-C20orf24A0A0A6YYL0 155 aa12.2□□□□□ -0.46
SNX1-203ENST00000558040 A0A1B0GW15 77 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms