RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 IGHV7-81A0A0B4J1V7 117 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 TRAV3A0A0B4J244 114 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 IGKV3D-20A0A0C4DH25 116 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 A0A0G2JLM5 398 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 SERTM2A0A1B0GWG4 89 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 A0A1W2PS18 150 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 GGTLC3B5MD39 225 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 H0YJW9 148 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 SLC17A3O00476 420 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 PEX7O00628 323 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 DLEU1O43261 78 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 HLA-DRB1P01911 266 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 APOHP02749 345 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-240ENST00000556339 TRGV3P03979 118 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 IGF1P05019 195 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 SAA1P0DJI8 122 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-240ENST00000556339 GP9P14770 177 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 PSMB8P28062 276 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 CTRLP40313 264 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 FOXA3P55318 350 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-240ENST00000556339 UBE2G1P62253 170 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 UBE2L3P68036 154 aaKnown RBP2.98□□□□□ -1.93
ATXN3-240ENST00000556339 FXYD3Q14802 87 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 SPINK9Q5DT21 86 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 Q6AWC8 147 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 ZFAND6Q6FIF0 208 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF705AQ6ZN79 300 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-240ENST00000556339 SBSPONQ8IVN8 264 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 VKORC1L1Q8N0U8 176 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 C5orf17Q8NAS9 161 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 MUC7Q8TAX7 377 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 DLX4Q92988 240 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-240ENST00000556339 HARBI1Q96MB7 349 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 RCHY1Q96PM5 261 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 ATG101Q9BSB4 218 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 NDFIP1Q9BT67 221 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 MS4A6AQ9H2W1 248 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 TMEM14CQ9P0S9 112 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 EPDR1Q9UM22 224 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 ZFP30Q9Y2G7 519 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 WASHC3Q9Y3C0 194 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 GOLT1BQ9Y3E0 138 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 CBY1Q9Y3M2 126 aa2.98□□□□□ -1.93
ATXN3-240ENST00000556339 IGHV4OR15-8A0A075B7B6 117 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 IGKV1OR2-108A0A075B7D4 117 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 TRAV30A0A087WSZ9 112 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 TRAV9-2A0A087WT02 112 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 A0A087WW49 117 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 A0A1B0GXF2 115 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 GRIFINA4D1Z8 144 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 PGPEP1LA6NFU8 196 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 SRRM4A7MD48 611 aaKnown RBP2.97□□□□□ -1.93
ATXN3-240ENST00000556339 K7EQM0 130 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 NUPR1O60356 82 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 HYPMO75409 117 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 HSBP1O75506 76 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 SCGB2A1O75556 95 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 ACTL6BO94805 426 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 SNRPCP09234 159 aaKnown RBP2.97□□□□□ -1.93
ATXN3-240ENST00000556339 LGALS1P09382 135 aaKnown RBP2.97□□□□□ -1.93
ATXN3-240ENST00000556339 FRMD6-AS1P0C7T7 363 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 IGLC2P0DOY2 106 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 IGLC3P0DOY3 106 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 MGST1P10620 155 aaKnown RBP2.97□□□□□ -1.93
ATXN3-240ENST00000556339 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 SRIP30626 198 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 HBBP68871 147 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 RELQ04864 619 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-240ENST00000556339 SPATA31B1PQ5VZV4 182 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 ZNF562Q6V9R5 426 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 GATD1Q8NB37 220 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 NUP35Q8NFH5 326 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 NPBQ8NG41 125 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 C18orf32Q8TCD1 76 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 VN1R17PQ8TDU5 208 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 ARPC1AQ92747 370 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 FXYD5Q96DB9 178 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 ALKBH7Q9BT30 221 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-240ENST00000556339 FAM103A1Q9BTL3 118 aaKnown RBP2.97□□□□□ -1.93
ATXN3-240ENST00000556339 HINT2Q9BX68 163 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 SLC25A2Q9BXI2 301 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 ST20Q9HBF5 79 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 OTORQ9NRC9 128 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 LAMTOR2Q9Y2Q5 125 aa2.97□□□□□ -1.93
ATXN3-240ENST00000556339 EPPK1P58107 5090 aaKnown RBP2.96□□□□□ -1.93
ATXN3-240ENST00000556339 TENM2Q9NT68 2774 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 DNAH9Q9NYC9 4486 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 IGKV1D-37A0A075B6S9 117 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 C19orf71A6NCJ1 209 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 SLC25A17O43808 307 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 LTAP01374 205 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 IGLV2-23P01705 113 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 P01737 135 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 IGKV1-16P04430 117 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 CRYGBP07316 175 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 NBEAP1P0C6P0 100 aa2.96□□□□□ -1.94
ATXN3-240ENST00000556339 C3orf79P0CE67 100 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms