RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CDKN2CP42773 168 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 ARF6P62330 175 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 FADDQ13158 208 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 KRTAP19-8Q3LI54 63 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 UBE2DNLQ8IWF7 75 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 Q8IZM0 81 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 PRAP1Q96NZ9 151 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 OTORQ9NRC9 128 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 TMEM242Q9NWH2 141 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 N4BP2Q86UW6 1770 aaPredicted RBP-0.8□□□□□ -2.54
SNX6-204ENST00000555541 ZNF292O60281 2723 aa-0.8□□□□□ -2.54
SNX6-204ENST00000555541 PKDREJQ9NTG1 2253 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 NHSL1Q5SYE7 1610 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 TRBV10-1A0A0K0K1A3 114 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 ATG12O94817 140 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 TFF1P04155 84 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 GCHFRP30047 84 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 POLR2JP52435 117 aaKnown RBP-0.81□□□□□ -2.54
SNX6-204ENST00000555541 TAS2R41P59536 307 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 KRTAP20-2Q3LI61 65 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 Q5VSD8 79 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 SSBP3-AS1Q7Z2R9 100 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 NUP35Q8NFH5 326 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 AP3S1Q92572 193 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 DGCR14Q96DF8 476 aaKnown RBP-0.81□□□□□ -2.54
SNX6-204ENST00000555541 SH3BGRL3Q9H299 93 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 SS18L2Q9UHA2 77 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 AFDNP55196 1824 aaKnown RBP-0.81□□□□□ -2.54
SNX6-204ENST00000555541 TNS1Q9HBL0 1735 aaKnown RBP-0.81□□□□□ -2.54
SNX6-204ENST00000555541 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.81□□□□□ -2.54
SNX6-204ENST00000555541 ATG2AQ2TAZ0 1938 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 ACANP16112 2415 aa-0.81□□□□□ -2.54
SNX6-204ENST00000555541 FAT1Q14517 4588 aa-0.82□□□□□ -2.54
SNX6-204ENST00000555541 A0A087WTM6 91 aa-0.82□□□□□ -2.54
SNX6-204ENST00000555541 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.82□□□□□ -2.54
SNX6-204ENST00000555541 A0A0D9SFI3 127 aa-0.82□□□□□ -2.54
SNX6-204ENST00000555541 RBAKDNA6NC62 111 aa-0.82□□□□□ -2.54
SNX6-204ENST00000555541 OR2H2O95918 312 aa-0.82□□□□□ -2.54
SNX6-204ENST00000555541 IFNA21P01568 189 aa-0.82□□□□□ -2.54
SNX6-204ENST00000555541 SLC25A4P12235 298 aa-0.82□□□□□ -2.54
SNX6-204ENST00000555541 SDC2P34741 201 aa-0.82□□□□□ -2.54
SNX6-204ENST00000555541 LRTM1Q9HBL6 345 aa-0.82□□□□□ -2.54
SNX6-204ENST00000555541 HERC2O95714 4834 aa-0.82□□□□□ -2.54
SNX6-204ENST00000555541 TRPM7Q96QT4 1865 aa-0.82□□□□□ -2.54
SNX6-204ENST00000555541 CREBBPQ92793 2442 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 PLB1Q6P1J6 1458 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 IGHV1-24A0A0C4DH33 117 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 TCRBV3S1A0A5B6 114 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 TMEM210A6NLX4 147 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 NIPSNAP2O75323 286 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 CSN2P05814 226 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 ACYP2P14621 99 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 SPRR2BP35325 72 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 BLCAPP62952 87 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 LTC4SQ16873 150 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 Q6ZRX8 168 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 TEX29Q8N6K0 151 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 CEP19Q96LK0 163 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 CARD19Q96LW7 228 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 Q96NJ1 140 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 MED11Q9P086 117 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 LAMTOR3Q9UHA4 124 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 F5P12259 2224 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 TRAPPC8Q9Y2L5 1435 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 CHD6Q8TD26 2715 aa-0.83□□□□□ -2.54
SNX6-204ENST00000555541 DLC1Q96QB1 1528 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 ANK1P16157 1881 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 PIK3C2AO00443 1686 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 KIAA1549LQ6ZVL6 1849 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 RYR3Q15413 4870 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 TRAV22A0A0B4J277 110 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 GABARAPH6UMI1 98 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 S100A6P06703 90 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 ADCYAP1P18509 176 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 CKS2P33552 79 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 SPRR1AP35321 89 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 BASP1P80723 227 aaKnown RBP-0.84□□□□□ -2.54
SNX6-204ENST00000555541 RGS21Q2M5E4 152 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 LINC00305Q7Z4B0 112 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 OR51A4Q8NGJ6 313 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 OR13C6PQ8NH95 151 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 VPS25Q9BRG1 176 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 NUP210LQ5VU65 1888 aa-0.84□□□□□ -2.54
SNX6-204ENST00000555541 NBEAL1Q6ZS30 2694 aa-0.85□□□□□ -2.55
SNX6-204ENST00000555541 TRBV7-1A0A0A6YYK4 115 aa-0.85□□□□□ -2.55
SNX6-204ENST00000555541 TRBV27A0A0K0K1C4 114 aa-0.85□□□□□ -2.55
SNX6-204ENST00000555541 TRDV1A0A1B0GX56 115 aa-0.85□□□□□ -2.55
SNX6-204ENST00000555541 SSC5DA1L4H1 1573 aa-0.85□□□□□ -2.55
SNX6-204ENST00000555541 PCF11O94913 1555 aaKnown RBP-0.85□□□□□ -2.55
SNX6-204ENST00000555541 LSM3P62310 102 aaKnown RBP-0.85□□□□□ -2.55
SNX6-204ENST00000555541 RPL19P84098 196 aaKnown RBP-0.85□□□□□ -2.55
SNX6-204ENST00000555541 DYDC1Q8WWB3 177 aa-0.85□□□□□ -2.55
SNX6-204ENST00000555541 CNFNQ9BYD5 112 aa-0.85□□□□□ -2.55
SNX6-204ENST00000555541 PIEZO2Q9H5I5 2752 aa-0.85□□□□□ -2.55
SNX6-204ENST00000555541 SETXQ7Z333 2677 aaKnown RBP-0.86□□□□□ -2.55
SNX6-204ENST00000555541 MAP2P11137 1827 aaKnown RBP-0.86□□□□□ -2.55
SNX6-204ENST00000555541 TRAV13-1A0A0B4J241 112 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 TMEM14DPA8MWL7 114 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 H3BMG7 143 aa-0.86□□□□□ -2.55
SNX6-204ENST00000555541 MFSD11O43934 449 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms