RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 SBF2Q86WG5 1849 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 FRMPD1Q5SYB0 1578 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 BAZ1AQ9NRL2 1556 aaPredicted RBP1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 SPHKAPQ2M3C7 1700 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 COL1A1P02452 1464 aaPredicted RBP1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 MAGI2Q86UL8 1455 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 FYCO1Q9BQS8 1478 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 CEP164Q9UPV0 1460 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 CPAMD8Q8IZJ3 1885 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 CR1P17927 2039 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 SCN3AQ9NY46 2000 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 HELZP42694 1942 aaKnown RBP1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 IBA57-AS1B1ANH7 110 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 PITX3O75364 302 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 HYPMO75409 117 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 RBP4P02753 201 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 COX6A1P12074 109 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 NFYAP23511 347 aaPredicted RBP1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 FXYD2P54710 66 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 EIF5AL1Q6IS14 154 aaKnown RBP1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 MRPL54Q6P161 138 aaKnown RBP1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 PATE2Q6UY27 113 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 Q6ZUT4 128 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 FP248Q71RG6 208 aaPredicted RBP1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 SVBPQ8N300 66 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 ATP6V0E2Q8NHE4 81 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 PFN4Q8NHR9 129 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 ZNF563Q8TA94 476 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 ZC2HC1AQ96GY0 325 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 SCGB3A1Q96QR1 104 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 LINC00467Q9BRT7 94 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 NPCDR1Q9BY65 106 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 FKBP11Q9NYL4 201 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 AP4S1Q9Y587 144 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 PARP14Q460N5 1801 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 SNRNP200O75643 2136 aaKnown RBP1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 FBN3Q75N90 2809 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 MUC6Q6W4X9 2439 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 ANK1P16157 1881 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 MUC4Q99102 2169 aa1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 SCAF11Q99590 1463 aaKnown RBP1.37□□□□□ -2.19
TSPAN8-205ENST00000550818 RTTNQ86VV8 2226 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 ARHGAP5Q13017 1502 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 DLC1Q96QB1 1528 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 TNRC6AQ8NDV7 1962 aaKnown RBP1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 MCRIP1C9JLW8 97 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 SDCBPO00560 298 aaPredicted RBP1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 SSSCA1O60232 199 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 PRB1P04280 392 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 GYPBP06028 91 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 SAA1P0DJI8 122 aaPredicted RBP1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 DOCK1Q14185 1865 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 ZNF345Q14585 488 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 EEA1Q15075 1411 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 Q1T7F1 81 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 OR2T2Q6IF00 324 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 ATP11AUNQ6ZP68 121 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 SIGLECL1Q8N7X8 197 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 CASKIN1Q8WXD9 1431 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 PSMF1Q92530 271 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 POP5Q969H6 163 aaKnown RBP1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 ABCA3Q99758 1704 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 REG4Q9BYZ8 158 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 NHP2Q9NX24 153 aaKnown RBP1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 BET1LQ9NYM9 111 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 LSM2Q9Y333 95 aaKnown RBP1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 NINQ8N4C6 2090 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 MYH8P13535 1937 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 GREB1Q4ZG55 1949 aa1.36□□□□□ -2.19
TSPAN8-205ENST00000550818 DIDO1Q9BTC0 2240 aaKnown RBP1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 PTPRDP23468 1912 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 UACAQ9BZF9 1416 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 KIDINS220Q9ULH0 1771 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 TRBV6-5A0A0K0K1A5 114 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 F8W1H4 67 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 TRACP01848 142 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 MT-ND6P03923 174 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 CD3DP04234 171 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 IL7P13232 177 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 TPT1P13693 172 aaKnown RBP1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 SNCAP37840 140 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 ASIPP42127 132 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 SNRPD3P62318 126 aaKnown RBP1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 ZNF846Q147U1 533 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 IQCJQ1A5X6 159 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 SPRNQ5BIV9 151 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 C9orf153Q5TBE3 101 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 C12orf73Q69YU5 71 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 OR5AS1Q8N127 324 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 FAM216BQ8N7L0 139 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 S100A13Q99584 98 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 VAMP8Q9BV40 100 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 PRO1933Q9H354 126 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 TAS2R4Q9NYW5 299 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 RABAC1Q9UI14 185 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 ERVK-7P63135 1459 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 PXDNQ92626 1479 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 CCDC88CQ9P219 2028 aa1.35□□□□□ -2.19
TSPAN8-205ENST00000550818 COL24A1Q17RW2 1714 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms