RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 K7EIL1 84 aa11.55□□□□□ -0.56
TRAFD1-203ENST00000547063 CXCL1P09341 107 aa11.55□□□□□ -0.56
TRAFD1-203ENST00000547063 Q6ZWC4 215 aa11.55□□□□□ -0.56
TRAFD1-203ENST00000547063 CSNK1G2-AS1Q8NCQ2 148 aa11.55□□□□□ -0.56
TRAFD1-203ENST00000547063 RPS10P5Q9NQ39 176 aa11.55□□□□□ -0.56
TRAFD1-203ENST00000547063 TMEM242Q9NWH2 141 aa11.55□□□□□ -0.56
TRAFD1-203ENST00000547063 NAGKQ9UJ70 344 aa11.55□□□□□ -0.56
TRAFD1-203ENST00000547063 DEFB121Q5J5C9 76 aa11.54□□□□□ -0.56
TRAFD1-203ENST00000547063 V9GYV3 84 aa11.54□□□□□ -0.56
TRAFD1-203ENST00000547063 NBEAL1Q6ZS30 2694 aa11.53□□□□□ -0.56
TRAFD1-203ENST00000547063 TRGV11A0A075B6L2 103 aa11.53□□□□□ -0.56
TRAFD1-203ENST00000547063 FAM231BA6NCW3 169 aa11.53□□□□□ -0.56
TRAFD1-203ENST00000547063 PRB2P02812 416 aaPredicted RBP11.53□□□□□ -0.56
TRAFD1-203ENST00000547063 ANXA2RQ3ZCQ2 193 aa11.53□□□□□ -0.56
TRAFD1-203ENST00000547063 MUC21Q5SSG8 566 aa11.53□□□□□ -0.56
TRAFD1-203ENST00000547063 ZNF705AQ6ZN79 300 aaPredicted RBP11.53□□□□□ -0.56
TRAFD1-203ENST00000547063 C1orf158Q8N1D5 194 aa11.53□□□□□ -0.56
TRAFD1-203ENST00000547063 GFRA4Q9GZZ7 299 aa11.53□□□□□ -0.56
TRAFD1-203ENST00000547063 IGHV3OR16-12A0A075B7B8 117 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 IGKV3D-20A0A0C4DH25 116 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 SMIM9A6NGZ8 99 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 CBY3A6NI87 242 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 RBMY1A1P0DJD3 496 aaKnown RBP11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 RBMY1CP0DJD4 496 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 ASIPP42127 132 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 Q6ZQT7 251 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 TSKUQ8WUA8 353 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 RCHY1Q96PM5 261 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 NEU1Q99519 415 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 C11orf21Q9P2W6 132 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 TP53TG1Q9Y2A0 90 aa11.52□□□□□ -0.57
TRAFD1-203ENST00000547063 A0A1W2PPQ1 181 aa11.51□□□□□ -0.57
TRAFD1-203ENST00000547063 S100A4P26447 101 aaKnown RBP11.51□□□□□ -0.57
TRAFD1-203ENST00000547063 DEFB135Q30KP9 77 aa11.51□□□□□ -0.57
TRAFD1-203ENST00000547063 DNLZQ5SXM8 178 aa11.51□□□□□ -0.57
TRAFD1-203ENST00000547063 ZNF493Q6ZR52 646 aa11.51□□□□□ -0.57
TRAFD1-203ENST00000547063 RNF183Q96D59 192 aa11.51□□□□□ -0.57
TRAFD1-203ENST00000547063 IMMP2LQ96T52 175 aa11.51□□□□□ -0.57
TRAFD1-203ENST00000547063 TMSB15BA0A087X1C1 80 aa11.5□□□□□ -0.57
TRAFD1-203ENST00000547063 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
TRAFD1-203ENST00000547063 HTN1P15515 57 aa11.5□□□□□ -0.57
TRAFD1-203ENST00000547063 S100PP25815 95 aa11.5□□□□□ -0.57
TRAFD1-203ENST00000547063 RPL19P84098 196 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-203ENST00000547063 RRN3P1Q2M238 152 aa11.5□□□□□ -0.57
TRAFD1-203ENST00000547063 KCNIP4Q6PIL6 250 aa11.5□□□□□ -0.57
TRAFD1-203ENST00000547063 MRAPQ8TCY5 172 aa11.5□□□□□ -0.57
TRAFD1-203ENST00000547063 IL36BQ9NZH7 164 aa11.5□□□□□ -0.57
TRAFD1-203ENST00000547063 SPRY2O43597 315 aa11.49□□□□□ -0.57
TRAFD1-203ENST00000547063 TYMSP04818 313 aa11.49□□□□□ -0.57
TRAFD1-203ENST00000547063 MED14OSP0DP75 135 aa11.49□□□□□ -0.57
TRAFD1-203ENST00000547063 FER1L6-AS1Q8NA97 138 aa11.49□□□□□ -0.57
TRAFD1-203ENST00000547063 NAT8BQ9UHF3 227 aa11.49□□□□□ -0.57
TRAFD1-203ENST00000547063 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
TRAFD1-203ENST00000547063 GRIFINA4D1Z8 144 aa11.48□□□□□ -0.57
TRAFD1-203ENST00000547063 F2Z2F3 143 aa11.48□□□□□ -0.57
TRAFD1-203ENST00000547063 GNRH2O43555 120 aa11.48□□□□□ -0.57
TRAFD1-203ENST00000547063 FOXA3P55318 350 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-203ENST00000547063 ZNF415Q09FC8 603 aa11.48□□□□□ -0.57
TRAFD1-203ENST00000547063 TMEM263Q8WUH6 116 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-203ENST00000547063 C16orf74Q96GX8 76 aa11.48□□□□□ -0.57
TRAFD1-203ENST00000547063 OR5AL1P0C617 328 aa11.47□□□□□ -0.57
TRAFD1-203ENST00000547063 ATRAIDQ6UW56 229 aa11.47□□□□□ -0.57
TRAFD1-203ENST00000547063 OR11H2Q8NH07 326 aa11.47□□□□□ -0.57
TRAFD1-203ENST00000547063 BORCS7Q96B45 105 aa11.47□□□□□ -0.57
TRAFD1-203ENST00000547063 BTF3L4Q96K17 158 aa11.47□□□□□ -0.57
TRAFD1-203ENST00000547063 SMCO4Q9NRQ5 59 aa11.47□□□□□ -0.57
TRAFD1-203ENST00000547063 TP53TG3Q9ULZ0 132 aa11.47□□□□□ -0.57
TRAFD1-203ENST00000547063 TRAV9-1A0A075B6T8 112 aa11.46□□□□□ -0.57
TRAFD1-203ENST00000547063 IGHV3-16A0A0C4DH30 117 aa11.46□□□□□ -0.57
TRAFD1-203ENST00000547063 HIGD1CA8MV81 97 aa11.46□□□□□ -0.57
TRAFD1-203ENST00000547063 IGLC6P0CF74 106 aa11.46□□□□□ -0.57
TRAFD1-203ENST00000547063 GZMBP10144 247 aa11.46□□□□□ -0.57
TRAFD1-203ENST00000547063 MIFP14174 115 aa11.46□□□□□ -0.57
TRAFD1-203ENST00000547063 SPATA25Q9BR10 227 aa11.46□□□□□ -0.57
TRAFD1-203ENST00000547063 SPXQ9BT56 116 aa11.46□□□□□ -0.57
TRAFD1-203ENST00000547063 SSBP4Q9BWG4 385 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-203ENST00000547063 SNURFLB1AK76 121 aa11.45□□□□□ -0.58
TRAFD1-203ENST00000547063 SNAI2O43623 268 aa11.45□□□□□ -0.58
TRAFD1-203ENST00000547063 ARMS2P0C7Q2 107 aa11.45□□□□□ -0.58
TRAFD1-203ENST00000547063 TCL1AP56279 114 aa11.45□□□□□ -0.58
TRAFD1-203ENST00000547063 WDR73Q6P4I2 378 aa11.45□□□□□ -0.58
TRAFD1-203ENST00000547063 ZNF575Q86XF7 245 aa11.45□□□□□ -0.58
TRAFD1-203ENST00000547063 RNASE8Q8TDE3 154 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-203ENST00000547063 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
TRAFD1-203ENST00000547063 TPPP3Q9BW30 176 aa11.45□□□□□ -0.58
TRAFD1-203ENST00000547063 X6R8D5 127 aa11.45□□□□□ -0.58
TRAFD1-203ENST00000547063 H3BVH4 76 aa11.44□□□□□ -0.58
TRAFD1-203ENST00000547063 RNASE3P12724 160 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-203ENST00000547063 CTRLP40313 264 aa11.44□□□□□ -0.58
TRAFD1-203ENST00000547063 CACNG7P62955 275 aa11.44□□□□□ -0.58
TRAFD1-203ENST00000547063 SBSPONQ8IVN8 264 aa11.44□□□□□ -0.58
TRAFD1-203ENST00000547063 C9orf85Q96MD7 179 aa11.44□□□□□ -0.58
TRAFD1-203ENST00000547063 OVOL2Q9BRP0 275 aa11.44□□□□□ -0.58
TRAFD1-203ENST00000547063 MDFICQ9P1T7 246 aa11.44□□□□□ -0.58
TRAFD1-203ENST00000547063 PHLDA3Q9Y5J5 127 aa11.44□□□□□ -0.58
TRAFD1-203ENST00000547063 A0A1B0GUT8 65 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 AZU1P20160 251 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 DEFA6Q01524 100 aa11.43□□□□□ -0.58
TRAFD1-203ENST00000547063 LYZL1Q6UWQ5 148 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms