RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 TRAV25A0A0B4J276 109 aa9.52□□□□□ -0.89
PAAF1-214ENST00000544552 SNAI2O43623 268 aa9.52□□□□□ -0.89
PAAF1-214ENST00000544552 NTF3P20783 257 aa9.52□□□□□ -0.89
PAAF1-214ENST00000544552 DNLZQ5SXM8 178 aa9.52□□□□□ -0.89
PAAF1-214ENST00000544552 LEPP41159 167 aa9.51□□□□□ -0.89
PAAF1-214ENST00000544552 PYY3Q5JQD4 70 aa9.51□□□□□ -0.89
PAAF1-214ENST00000544552 FAM104BQ5XKR9 115 aa9.51□□□□□ -0.89
PAAF1-214ENST00000544552 TMEM61Q8N0U2 210 aa9.51□□□□□ -0.89
PAAF1-214ENST00000544552 DYNLRB2Q8TF09 96 aa9.51□□□□□ -0.89
PAAF1-214ENST00000544552 TMEM191AQ9H0A3 160 aa9.51□□□□□ -0.89
PAAF1-214ENST00000544552 MED14OSP0DP75 135 aa9.5□□□□□ -0.89
PAAF1-214ENST00000544552 TSPOP30536 169 aa9.5□□□□□ -0.89
PAAF1-214ENST00000544552 RNASE4P34096 147 aaKnown RBP9.5□□□□□ -0.89
PAAF1-214ENST00000544552 CACNG7P62955 275 aa9.5□□□□□ -0.89
PAAF1-214ENST00000544552 JOSD1Q15040 202 aaPredicted RBP9.5□□□□□ -0.89
PAAF1-214ENST00000544552 TWIST1Q15672 202 aa9.5□□□□□ -0.89
PAAF1-214ENST00000544552 C11orf44Q8N8P7 122 aa9.5□□□□□ -0.89
PAAF1-214ENST00000544552 SPAG8Q99932 426 aaPredicted RBP9.5□□□□□ -0.89
PAAF1-214ENST00000544552 U3KQK5 164 aa9.5□□□□□ -0.89
PAAF1-214ENST00000544552 ANK3Q12955 4377 aaKnown RBP9.5□□□□□ -0.89
PAAF1-214ENST00000544552 A0A1W2PRX2 142 aa9.49□□□□□ -0.89
PAAF1-214ENST00000544552 A8MTW9 85 aa9.49□□□□□ -0.89
PAAF1-214ENST00000544552 Q6ZQT7 251 aa9.49□□□□□ -0.89
PAAF1-214ENST00000544552 KCNS1Q96KK3 526 aa9.49□□□□□ -0.89
PAAF1-214ENST00000544552 RCHY1Q96PM5 261 aa9.49□□□□□ -0.89
PAAF1-214ENST00000544552 CD33P20138 364 aa9.49□□□□□ -0.89
PAAF1-214ENST00000544552 ANXA2RQ3ZCQ2 193 aa9.49□□□□□ -0.89
PAAF1-214ENST00000544552 C7orf71A4D174 169 aa9.48□□□□□ -0.89
PAAF1-214ENST00000544552 OR4C46A6NHA9 309 aa9.48□□□□□ -0.89
PAAF1-214ENST00000544552 ADARB2-AS1A8MUL3 147 aa9.48□□□□□ -0.89
PAAF1-214ENST00000544552 J3KRW8 73 aa9.48□□□□□ -0.89
PAAF1-214ENST00000544552 ZNF324O75467 553 aaPredicted RBP9.48□□□□□ -0.89
PAAF1-214ENST00000544552 CDKN1BP46527 198 aa9.48□□□□□ -0.89
PAAF1-214ENST00000544552 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
PAAF1-214ENST00000544552 IQCJQ1A5X6 159 aa9.48□□□□□ -0.89
PAAF1-214ENST00000544552 TDRG1Q3Y452 100 aa9.48□□□□□ -0.89
PAAF1-214ENST00000544552 CD300EQ496F6 205 aaPredicted RBP9.48□□□□□ -0.89
PAAF1-214ENST00000544552 HIST2H2BDQ6DRA6 164 aa9.48□□□□□ -0.89
PAAF1-214ENST00000544552 SAMD10Q9BYL1 202 aa9.48□□□□□ -0.89
PAAF1-214ENST00000544552 SORL1Q92673 2214 aa9.48□□□□□ -0.89
PAAF1-214ENST00000544552 MUC21A0A0G2JKD1 596 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 MUC21A0A140T8X8 626 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 PPBPP02775 128 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 ASIPP42127 132 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 DEFB131AP59861 70 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 MUC21Q5SSG8 566 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 AMTNQ6UX39 209 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 NIT1Q86X76 327 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 NDUFA11Q86Y39 141 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 AMN1Q8IY45 258 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 CHCHD1Q96BP2 118 aaKnown RBP9.47□□□□□ -0.89
PAAF1-214ENST00000544552 SCRT2Q9NQ03 307 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 NIT2Q9NQR4 276 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 MSRB1Q9NZV6 116 aa9.47□□□□□ -0.89
PAAF1-214ENST00000544552 ZNF256Q9Y2P7 627 aaPredicted RBP9.47□□□□□ -0.89
PAAF1-214ENST00000544552 HLA-DRB4P13762 266 aa9.46□□□□□ -0.89
PAAF1-214ENST00000544552 MRPL51Q4U2R6 128 aaKnown RBP9.46□□□□□ -0.89
PAAF1-214ENST00000544552 LURAP1LQ8IV03 231 aa9.46□□□□□ -0.89
PAAF1-214ENST00000544552 ORMDL3Q8N138 153 aa9.46□□□□□ -0.89
PAAF1-214ENST00000544552 OR10AG1Q8NH19 301 aa9.46□□□□□ -0.89
PAAF1-214ENST00000544552 CLUHP3Q96NS8 147 aa9.46□□□□□ -0.89
PAAF1-214ENST00000544552 NAGKQ9UJ70 344 aa9.46□□□□□ -0.89
PAAF1-214ENST00000544552 HLA-DRB4X5D2U9 266 aa9.46□□□□□ -0.89
PAAF1-214ENST00000544552 TEP1Q99973 2627 aaKnown RBP9.46□□□□□ -0.9
PAAF1-214ENST00000544552 H3BMM0 161 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 LINC00614P0C842 121 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 RAB4AP20338 218 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 S100A4P26447 101 aaKnown RBP9.45□□□□□ -0.9
PAAF1-214ENST00000544552 AMTP48728 403 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 SSTP61278 116 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 PRR31Q5SQ13 230 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 RNF185Q96GF1 192 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 URB1-AS1Q96HZ7 61 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 H3BVH4 76 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 HSBP1O75506 76 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 SPANXN1Q5VSR9 72 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 SMIM15Q7Z3B0 74 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 MAP6D1Q9H9H5 199 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 LAMTOR2Q9Y2Q5 125 aa9.45□□□□□ -0.9
PAAF1-214ENST00000544552 NF1P21359 2839 aa9.44□□□□□ -0.9
PAAF1-214ENST00000544552 AGRNO00468 2067 aa9.44□□□□□ -0.9
PAAF1-214ENST00000544552 TRAV12-3A0A0B4J271 114 aa9.44□□□□□ -0.9
PAAF1-214ENST00000544552 D6R8Y8 96 aa9.44□□□□□ -0.9
PAAF1-214ENST00000544552 GNRH2O43555 120 aa9.44□□□□□ -0.9
PAAF1-214ENST00000544552 RNASE3P12724 160 aaKnown RBP9.44□□□□□ -0.9
PAAF1-214ENST00000544552 PMCHP20382 165 aa9.44□□□□□ -0.9
PAAF1-214ENST00000544552 CMC4P56277 68 aaPredicted RBP9.44□□□□□ -0.9
PAAF1-214ENST00000544552 Q6ZWC4 215 aa9.44□□□□□ -0.9
PAAF1-214ENST00000544552 OR2K2Q8NGT1 345 aa9.44□□□□□ -0.9
PAAF1-214ENST00000544552 PRELID3AQ96N28 172 aa9.44□□□□□ -0.9
PAAF1-214ENST00000544552 KNCNA6PVL3 124 aa9.43□□□□□ -0.9
PAAF1-214ENST00000544552 M0R2Z0 102 aa9.43□□□□□ -0.9
PAAF1-214ENST00000544552 IGKV3-20P01619 116 aa9.43□□□□□ -0.9
PAAF1-214ENST00000544552 CKS2P33552 79 aa9.43□□□□□ -0.9
PAAF1-214ENST00000544552 SPINK13Q1W4C9 94 aa9.43□□□□□ -0.9
PAAF1-214ENST00000544552 RNASEKQ6P5S7 137 aaKnown RBP9.43□□□□□ -0.9
PAAF1-214ENST00000544552 NXPH4O95158 308 aa9.42□□□□□ -0.9
PAAF1-214ENST00000544552 EVI2AP22794 236 aa9.42□□□□□ -0.9
PAAF1-214ENST00000544552 KRTAP10-3P60369 221 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms