RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 TRAV8-2A0A0B4J237 113 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 AP1S3Q96PC3 154 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 CCL19Q99731 98 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 MAP1LC3AQ9H492 121 aa11.51□□□□□ -0.57
VARS2-211ENST00000541562 PCP4P48539 62 aa11.5□□□□□ -0.57
VARS2-211ENST00000541562 PET117Q6UWS5 81 aa11.5□□□□□ -0.57
VARS2-211ENST00000541562 Q8N6K4 173 aa11.49□□□□□ -0.57
VARS2-211ENST00000541562 MRPS16Q9Y3D3 137 aaKnown RBP11.49□□□□□ -0.57
VARS2-211ENST00000541562 ZNF688P0C7X2 276 aa11.49□□□□□ -0.57
VARS2-211ENST00000541562 ZNF575Q86XF7 245 aa11.49□□□□□ -0.57
VARS2-211ENST00000541562 ST20Q9HBF5 79 aa11.49□□□□□ -0.57
VARS2-211ENST00000541562 FBXL19-AS1Q494R0 122 aa11.49□□□□□ -0.57
VARS2-211ENST00000541562 C5orf56Q8N8D9 126 aa11.49□□□□□ -0.57
VARS2-211ENST00000541562 FAM110DQ8TAY7 271 aaPredicted RBP11.49□□□□□ -0.57
VARS2-211ENST00000541562 RNF185Q96GF1 192 aa11.49□□□□□ -0.57
VARS2-211ENST00000541562 IGHV3-73A0A0B4J1V6 119 aa11.48□□□□□ -0.57
VARS2-211ENST00000541562 FAM231BA6NCW3 169 aa11.48□□□□□ -0.57
VARS2-211ENST00000541562 UBE2V1Q13404 147 aa11.48□□□□□ -0.57
VARS2-211ENST00000541562 VPS25Q9BRG1 176 aa11.48□□□□□ -0.57
VARS2-211ENST00000541562 ZNF469Q96JG9 3925 aaPredicted RBP11.48□□□□□ -0.57
VARS2-211ENST00000541562 SCGB2A1O75556 95 aa11.48□□□□□ -0.57
VARS2-211ENST00000541562 LYPD1Q8N2G4 141 aa11.48□□□□□ -0.57
VARS2-211ENST00000541562 LINC01545Q5VT33 79 aa11.48□□□□□ -0.57
VARS2-211ENST00000541562 C2orf91Q6ZV80 131 aa11.48□□□□□ -0.57
VARS2-211ENST00000541562 OR4X2Q8NGF9 303 aa11.47□□□□□ -0.57
VARS2-211ENST00000541562 SPOCK3Q9BQ16 436 aa11.47□□□□□ -0.57
VARS2-211ENST00000541562 TRAV12-3A0A0B4J271 114 aa11.47□□□□□ -0.57
VARS2-211ENST00000541562 TMEM97Q5BJF2 176 aa11.47□□□□□ -0.57
VARS2-211ENST00000541562 SMIM12Q96EX1 92 aa11.47□□□□□ -0.57
VARS2-211ENST00000541562 NBPF19A0A087WUL8 3843 aa11.47□□□□□ -0.57
VARS2-211ENST00000541562 TMEM8BA6NDV4 472 aa11.47□□□□□ -0.57
VARS2-211ENST00000541562 PDE6HQ13956 83 aa11.47□□□□□ -0.57
VARS2-211ENST00000541562 DEFB136Q30KP8 78 aa11.47□□□□□ -0.57
VARS2-211ENST00000541562 S100A7AQ86SG5 101 aa11.47□□□□□ -0.57
VARS2-211ENST00000541562 SAP30O75446 220 aa11.46□□□□□ -0.57
VARS2-211ENST00000541562 MINOS1Q5TGZ0 78 aa11.46□□□□□ -0.57
VARS2-211ENST00000541562 MRPL35Q9NZE8 188 aaKnown RBP11.46□□□□□ -0.57
VARS2-211ENST00000541562 PHLDA3Q9Y5J5 127 aa11.46□□□□□ -0.57
VARS2-211ENST00000541562 MINOS1-NBL1R4GNA1 71 aa11.46□□□□□ -0.57
VARS2-211ENST00000541562 ITPR3Q14573 2671 aa11.46□□□□□ -0.57
VARS2-211ENST00000541562 ANXA2RQ3ZCQ2 193 aa11.46□□□□□ -0.58
VARS2-211ENST00000541562 HECTD1Q9ULT8 2610 aa11.46□□□□□ -0.58
VARS2-211ENST00000541562 IGHV4-59P01825 116 aa11.46□□□□□ -0.58
VARS2-211ENST00000541562 SMIM17P0DL12 118 aa11.46□□□□□ -0.58
VARS2-211ENST00000541562 UCNP55089 124 aa11.46□□□□□ -0.58
VARS2-211ENST00000541562 SMIM15Q7Z3B0 74 aa11.46□□□□□ -0.58
VARS2-211ENST00000541562 PPP1R14DQ9NXH3 145 aa11.46□□□□□ -0.58
VARS2-211ENST00000541562 TGFAP01135 160 aa11.45□□□□□ -0.58
VARS2-211ENST00000541562 KLK9Q9UKQ9 250 aa11.45□□□□□ -0.58
VARS2-211ENST00000541562 IGHV3-64A0A075B6Q5 118 aa11.45□□□□□ -0.58
VARS2-211ENST00000541562 RIPPLY3P57055 190 aa11.45□□□□□ -0.58
VARS2-211ENST00000541562 PAX2Q02962 417 aa11.45□□□□□ -0.58
VARS2-211ENST00000541562 RHPN1-AS1Q9BWJ2 59 aa11.45□□□□□ -0.58
VARS2-211ENST00000541562 COX8AP10176 69 aa11.44□□□□□ -0.58
VARS2-211ENST00000541562 JMJD8Q96S16 334 aa11.44□□□□□ -0.58
VARS2-211ENST00000541562 ITPR2Q14571 2701 aa11.44□□□□□ -0.58
VARS2-211ENST00000541562 ARL6IP6Q8N6S5 226 aa11.44□□□□□ -0.58
VARS2-211ENST00000541562 NHP2Q9NX24 153 aaKnown RBP11.44□□□□□ -0.58
VARS2-211ENST00000541562 IGHV1-69DA0A0B4J2H0 117 aa11.44□□□□□ -0.58
VARS2-211ENST00000541562 IGHV1-69P01742 117 aa11.44□□□□□ -0.58
VARS2-211ENST00000541562 CLEC2AQ6UVW9 174 aa11.44□□□□□ -0.58
VARS2-211ENST00000541562 PIFOQ8TCI5 191 aa11.44□□□□□ -0.58
VARS2-211ENST00000541562 IGLC6P0CF74 106 aa11.43□□□□□ -0.58
VARS2-211ENST00000541562 HIST2H2BCQ6DN03 193 aa11.43□□□□□ -0.58
VARS2-211ENST00000541562 ZNF256Q9Y2P7 627 aaPredicted RBP11.43□□□□□ -0.58
VARS2-211ENST00000541562 C12orf54Q6X4T0 127 aa11.43□□□□□ -0.58
VARS2-211ENST00000541562 GAGE10A6NGK3 116 aa11.43□□□□□ -0.58
VARS2-211ENST00000541562 C16orf54Q6UWD8 224 aa11.43□□□□□ -0.58
VARS2-211ENST00000541562 MOB4Q9Y3A3 225 aa11.43□□□□□ -0.58
VARS2-211ENST00000541562 CRXO43186 299 aaPredicted RBP11.42□□□□□ -0.58
VARS2-211ENST00000541562 OR10J6PQ8NGY7 276 aa11.42□□□□□ -0.58
VARS2-211ENST00000541562 BEX4Q9NWD9 120 aaPredicted RBP11.42□□□□□ -0.58
VARS2-211ENST00000541562 FXYD2P54710 66 aa11.42□□□□□ -0.58
VARS2-211ENST00000541562 ORAOV1Q8WV07 137 aa11.42□□□□□ -0.58
VARS2-211ENST00000541562 SRSF8Q9BRL6 282 aaKnown RBP11.42□□□□□ -0.58
VARS2-211ENST00000541562 MUC4Q99102 2169 aa11.42□□□□□ -0.58
VARS2-211ENST00000541562 FASNP49327 2511 aaKnown RBP11.42□□□□□ -0.58
VARS2-211ENST00000541562 PSMG4Q5JS54 123 aa11.42□□□□□ -0.58
VARS2-211ENST00000541562 MAPKAPK5-AS1Q8N8E1 139 aa11.41□□□□□ -0.58
VARS2-211ENST00000541562 Q6AWC8 147 aa11.41□□□□□ -0.58
VARS2-211ENST00000541562 NPFFR1Q9GZQ6 430 aa11.41□□□□□ -0.58
VARS2-211ENST00000541562 CD7P09564 240 aa11.41□□□□□ -0.58
VARS2-211ENST00000541562 AMTNQ6UX39 209 aa11.41□□□□□ -0.58
VARS2-211ENST00000541562 PIMREGQ9BSJ6 248 aa11.41□□□□□ -0.58
VARS2-211ENST00000541562 KNCNA6PVL3 124 aa11.4□□□□□ -0.58
VARS2-211ENST00000541562 CD5LO43866 347 aa11.4□□□□□ -0.58
VARS2-211ENST00000541562 SYNJ2BPP57105 145 aa11.4□□□□□ -0.58
VARS2-211ENST00000541562 RPL24P83731 157 aaKnown RBP11.4□□□□□ -0.58
VARS2-211ENST00000541562 MYOZ3Q8TDC0 251 aa11.4□□□□□ -0.58
VARS2-211ENST00000541562 OPRPNQ99935 248 aaPredicted RBP11.4□□□□□ -0.58
VARS2-211ENST00000541562 SCGB2A2Q13296 93 aa11.4□□□□□ -0.58
VARS2-211ENST00000541562 GAGE12BA1L429 117 aa11.39□□□□□ -0.59
VARS2-211ENST00000541562 SPINK13Q1W4C9 94 aa11.39□□□□□ -0.59
VARS2-211ENST00000541562 CD300EQ496F6 205 aaPredicted RBP11.39□□□□□ -0.59
VARS2-211ENST00000541562 ZNF493Q6ZR52 646 aa11.39□□□□□ -0.59
VARS2-211ENST00000541562 APCP25054 2843 aa11.39□□□□□ -0.59
VARS2-211ENST00000541562 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
VARS2-211ENST00000541562 RPL39P62891 51 aaKnown RBP11.39□□□□□ -0.59
VARS2-211ENST00000541562 GAGE1Q13065 139 aa11.39□□□□□ -0.59
VARS2-211ENST00000541562 EBI3Q14213 229 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms