RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SPATA3Q8NHX4 192 aa9.11□□□□□ -0.95
AP003559.1-201ENST00000540906 HIST1H2BLQ99880 126 aa9.11□□□□□ -0.95
AP003559.1-201ENST00000540906 NAGKQ9UJ70 344 aa9.11□□□□□ -0.95
AP003559.1-201ENST00000540906 RBMY1BA6NDE4 496 aaKnown RBP9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 RBMY1EA6NEQ0 496 aaKnown RBP9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 M0R2Z0 102 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 GPX1P07203 203 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 RBMY1DP0C7P1 496 aaKnown RBP9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 RIGQ13278 110 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 AMTNQ6UX39 209 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 GATD1Q8NB37 220 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 RCHY1Q96PM5 261 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 ALKBH7Q9BT30 221 aaPredicted RBP9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 ZNF256Q9Y2P7 627 aaPredicted RBP9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 TRAV12-2A0A075B6T6 113 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 SERF1AO75920 110 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 AMBPP02760 352 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 FABP4P15090 132 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 ANXA2RQ3ZCQ2 193 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 Q6AWC8 147 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 MAP6D1Q9H9H5 199 aa9.1□□□□□ -0.95
AP003559.1-201ENST00000540906 GNRH2O43555 120 aa9.09□□□□□ -0.95
AP003559.1-201ENST00000540906 FXYD7P58549 80 aa9.09□□□□□ -0.95
AP003559.1-201ENST00000540906 PAFAH1B2P68402 229 aa9.09□□□□□ -0.95
AP003559.1-201ENST00000540906 Q0VG73 95 aa9.09□□□□□ -0.95
AP003559.1-201ENST00000540906 OR10AG1Q8NH19 301 aa9.09□□□□□ -0.95
AP003559.1-201ENST00000540906 C18orf32Q8TCD1 76 aa9.09□□□□□ -0.95
AP003559.1-201ENST00000540906 LOC102724200A0A096LPH7 203 aaPredicted RBP9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 TRAV21A0A0B4J279 112 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 NTF3P20783 257 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 SPINK13Q1W4C9 94 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 FOXI2Q6ZQN5 318 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 LINC00518Q8N0U6 118 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 OR10D4PQ8NGN7 298 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 TRAV12-3A0A0B4J271 114 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 TRBV7-9A0A0J9YWB2 115 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 H3BVH4 76 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 ODF3L2Q3SX64 289 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 EBLN2Q6P2I7 272 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 AMN1Q8IY45 258 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 URB1-AS1Q96HZ7 61 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 CNFNQ9BYD5 112 aa9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 TIMM8BQ9Y5J9 83 aaPredicted RBP9.08□□□□□ -0.96
AP003559.1-201ENST00000540906 TENM1Q9UKZ4 2725 aa9.07□□□□□ -0.96
AP003559.1-201ENST00000540906 TRAV2A0A0B4J234 112 aa9.07□□□□□ -0.96
AP003559.1-201ENST00000540906 ZNF324O75467 553 aaPredicted RBP9.07□□□□□ -0.96
AP003559.1-201ENST00000540906 RBMY1A1P0DJD3 496 aaKnown RBP9.07□□□□□ -0.96
AP003559.1-201ENST00000540906 RBMY1CP0DJD4 496 aa9.07□□□□□ -0.96
AP003559.1-201ENST00000540906 RBMY1FQ15415 496 aaKnown RBP9.07□□□□□ -0.96
AP003559.1-201ENST00000540906 TWIST1Q15672 202 aa9.07□□□□□ -0.96
AP003559.1-201ENST00000540906 CDPF1Q6NVV7 123 aa9.07□□□□□ -0.96
AP003559.1-201ENST00000540906 ZNF493Q6ZR52 646 aa9.07□□□□□ -0.96
AP003559.1-201ENST00000540906 PRIMA1Q86XR5 153 aa9.07□□□□□ -0.96
AP003559.1-201ENST00000540906 H3BMM0 161 aa9.06□□□□□ -0.96
AP003559.1-201ENST00000540906 SNAI2O43623 268 aa9.06□□□□□ -0.96
AP003559.1-201ENST00000540906 GAS8-AS1O95177 125 aa9.06□□□□□ -0.96
AP003559.1-201ENST00000540906 BAGE3Q86Y29 109 aa9.06□□□□□ -0.96
AP003559.1-201ENST00000540906 NDUFA11Q86Y39 141 aa9.06□□□□□ -0.96
AP003559.1-201ENST00000540906 BORCS7Q96B45 105 aa9.06□□□□□ -0.96
AP003559.1-201ENST00000540906 ODF3Q96PU9 254 aa9.06□□□□□ -0.96
AP003559.1-201ENST00000540906 SIGLEC8Q9NYZ4 499 aa9.06□□□□□ -0.96
AP003559.1-201ENST00000540906 C7orf71A4D174 169 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 A8MTW9 85 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 CRXO43186 299 aaPredicted RBP9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 SAP30O75446 220 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 HLA-DRB4P13762 266 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 S100A2P29034 98 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 LEPP41159 167 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 RNF185Q96GF1 192 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 PACRGQ96M98 296 aaPredicted RBP9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 SPAG8Q99932 426 aaPredicted RBP9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 HLA-DRB4X5D2U9 266 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 A0A1B0GW15 77 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 SMKR1H3BMG3 65 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 ESDP10768 282 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 RNASE3P12724 160 aaKnown RBP9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 MRPL51Q4U2R6 128 aaKnown RBP9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 PYY3Q5JQD4 70 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 OR10J3Q5JRS4 329 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 FAM104BQ5XKR9 115 aa9.05□□□□□ -0.96
AP003559.1-201ENST00000540906 MUC4Q99102 2169 aa9.04□□□□□ -0.96
AP003559.1-201ENST00000540906 OR4C46A6NHA9 309 aa9.04□□□□□ -0.96
AP003559.1-201ENST00000540906 DUSP14O95147 198 aaKnown RBP9.04□□□□□ -0.96
AP003559.1-201ENST00000540906 CDKN1BP46527 198 aa9.04□□□□□ -0.96
AP003559.1-201ENST00000540906 LINC00482Q8N8I6 264 aa9.04□□□□□ -0.96
AP003559.1-201ENST00000540906 WFDC10AQ9H1F0 79 aa9.04□□□□□ -0.96
AP003559.1-201ENST00000540906 TRAV25A0A0B4J276 109 aa9.03□□□□□ -0.96
AP003559.1-201ENST00000540906 NCR2O95944 276 aa9.03□□□□□ -0.96
AP003559.1-201ENST00000540906 IGLV1-51P01701 117 aa9.03□□□□□ -0.96
AP003559.1-201ENST00000540906 PRM2P04554 102 aa9.03□□□□□ -0.96
AP003559.1-201ENST00000540906 S100A8P05109 93 aa9.03□□□□□ -0.96
AP003559.1-201ENST00000540906 OR5AL1P0C617 328 aa9.03□□□□□ -0.96
AP003559.1-201ENST00000540906 C12orf57Q99622 126 aa9.03□□□□□ -0.96
AP003559.1-201ENST00000540906 D6R8Y8 96 aa9.03□□□□□ -0.96
AP003559.1-201ENST00000540906 EVI2AP22794 236 aa9.03□□□□□ -0.96
AP003559.1-201ENST00000540906 SCRT2Q9NQ03 307 aa9.03□□□□□ -0.96
AP003559.1-201ENST00000540906 U3KQK5 164 aa9.03□□□□□ -0.96
AP003559.1-201ENST00000540906 ATRQ13535 2644 aa9.02□□□□□ -0.97
AP003559.1-201ENST00000540906 IGHV4-4A0A075B6R2 117 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms