RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 GPR132Q9UNW8 380 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 PRELID1Q9Y255 219 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 MUC17Q685J3 4493 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 IGKV2D-24A0A075B6R9 120 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 TRBV7-9A0A0J9YWB2 115 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 A0A1B0GUV1 79 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 DUXBA0A1W2PPF3 345 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 SMCO3A2RU48 225 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 DISC1C4P0D8 188 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 CTDSP2O14595 271 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 SYNGR2O43760 224 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 CIDEAO60543 219 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 SLC25A6P12236 298 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 ANXA3P12429 323 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 VWC2Q2TAL6 325 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 SPANXN5Q5MJ07 72 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 Q6ZQT7 251 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 DAZ4Q86SG3 579 aaKnown RBP2.92□□□□□ -1.94
SNHG1-214ENST00000540865 ZFAND2AQ8N6M9 145 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 SLC25A29Q8N8R3 303 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 YIPF6Q96EC8 236 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 C2orf50Q96LR7 162 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 CNBD2Q96M20 576 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 PRADC1Q9BSG0 188 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 SRRQ9GZT4 340 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 DAZ3Q9NR90 486 aaKnown RBP2.92□□□□□ -1.94
SNHG1-214ENST00000540865 COMMD3Q9UBI1 195 aa2.92□□□□□ -1.94
SNHG1-214ENST00000540865 STRAPQ9Y3F4 350 aaKnown RBP2.92□□□□□ -1.94
SNHG1-214ENST00000540865 IGHV3-16A0A0C4DH30 117 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 TRBV6-4A0A1B0GX49 114 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 ANKRD65E5RJM6 399 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 FNDC10F2Z333 226 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 PANO1I0J062 215 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 M0R2P5 195 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 M0R3E3 92 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 WRBO00258 174 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 GOSR2O14653 212 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 COX7A2P2O60397 106 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 OR10J4P0C629 311 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 HIST1H1EP10412 219 aaKnown RBP2.91□□□□□ -1.94
SNHG1-214ENST00000540865 TGFBR1P36897 503 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 RPL36AP83881 106 aaKnown RBP2.91□□□□□ -1.94
SNHG1-214ENST00000540865 SSBP1Q04837 148 aaKnown RBP2.91□□□□□ -1.94
SNHG1-214ENST00000540865 CIRBPQ14011 172 aaKnown RBP2.91□□□□□ -1.94
SNHG1-214ENST00000540865 RHOHQ15669 191 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 TMEM78Q5T7P6 136 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 PRR9Q5T870 116 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 ATRAIDQ6UW56 229 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 ZNF546Q86UE3 836 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 C9orf163Q8N9P6 203 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 OR10G9Q8NGN4 311 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 C15orf40Q8WUR7 153 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 RNF185Q96GF1 192 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 ZC2HC1AQ96GY0 325 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 SCGB3A2Q96PL1 93 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 PRRT1Q99946 306 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 OR51M1Q9H341 326 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 NPVFQ9HCQ7 196 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 ZNF492Q9P255 531 aa2.91□□□□□ -1.94
SNHG1-214ENST00000540865 TRBV19A0A075B6N1 114 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 A0A087WWC5 75 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 FBLL1A6NHQ2 334 aaKnown RBP2.9□□□□□ -1.95
SNHG1-214ENST00000540865 FAM25AB3EWG3 89 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 FAM25CB3EWG5 89 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 FAM25GB3EWG6 89 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 H3BP45 60 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 HPGDSO60760 199 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 UBE2MP61081 183 aaKnown RBP2.9□□□□□ -1.95
SNHG1-214ENST00000540865 RPL19P84098 196 aaKnown RBP2.9□□□□□ -1.95
SNHG1-214ENST00000540865 SLC38A11Q08AI6 406 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 RAB31Q13636 194 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 PDE6HQ13956 83 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 ZNF266Q14584 549 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 ELOBQ15370 118 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 TMEM183BQ1AE95 376 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 MUC21Q5SSG8 566 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 C10orf113Q5VZT2 155 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 FAAP20Q6NZ36 180 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 REG3GQ6UW15 175 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 FAM159AQ6UWV7 190 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 DPPA3Q6W0C5 159 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 SDIM1Q6ZPB5 146 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 NIT1Q86X76 327 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 TMEM183AQ8IXX5 376 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 URGCP-MRPS24S4R325 110 aa2.9□□□□□ -1.95
SNHG1-214ENST00000540865 IGKV2-40A0A087WW87 121 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-214ENST00000540865 AGPAT2O15120 278 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 IGKV2D-40P01614 121 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-214ENST00000540865 AKAIN1P0CW23 69 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 MGST1P10620 155 aaKnown RBP2.89□□□□□ -1.95
SNHG1-214ENST00000540865 ZNF138P52744 262 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 RRAS2P62070 204 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-214ENST00000540865 MRPS10P82664 201 aaKnown RBP2.89□□□□□ -1.95
SNHG1-214ENST00000540865 Q0VG73 95 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 NEDD8Q15843 81 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 Q6AWC8 147 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 C12orf45Q8N5I9 185 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-214ENST00000540865 OR1L4Q8NGR5 311 aa2.89□□□□□ -1.95
SNHG1-214ENST00000540865 C7orf33Q8WU49 177 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms