RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 LYNX1G3V0Z9 82 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 ORM1P02763 201 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 LYNX1P0DP58 116 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 RPL32P62910 135 aaKnown RBP12.05□□□□□ -0.48
CHFR-213ENST00000536843 PRB3Q04118 309 aaPredicted RBP12.05□□□□□ -0.48
CHFR-213ENST00000536843 IL17RELQ6ZVW7 336 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 Q8TAT8 98 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 LINC01560Q8TB33 94 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 KIR2DL4Q99706 377 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 VKORC1Q9BQB6 163 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 M0QXV9 152 aa12.04□□□□□ -0.48
CHFR-213ENST00000536843 CD3EP07766 207 aa12.04□□□□□ -0.48
CHFR-213ENST00000536843 IGHV1-8P0DP01 117 aa12.04□□□□□ -0.48
CHFR-213ENST00000536843 EFNA4P52798 201 aa12.04□□□□□ -0.48
CHFR-213ENST00000536843 DLX1P56177 255 aa12.04□□□□□ -0.48
CHFR-213ENST00000536843 PPP1R27Q86WC6 154 aa12.04□□□□□ -0.48
CHFR-213ENST00000536843 ZNF672Q499Z4 452 aaPredicted RBP12.03□□□□□ -0.48
CHFR-213ENST00000536843 AJUBAQ96IF1 538 aa12.03□□□□□ -0.48
CHFR-213ENST00000536843 RAX2Q96IS3 184 aa12.03□□□□□ -0.48
CHFR-213ENST00000536843 FABP5P3A8MUU1 101 aa12.03□□□□□ -0.48
CHFR-213ENST00000536843 B9A039 149 aa12.03□□□□□ -0.48
CHFR-213ENST00000536843 GAGE2BQ13066 116 aa12.03□□□□□ -0.48
CHFR-213ENST00000536843 GAGE2EQ4V326 116 aa12.03□□□□□ -0.48
CHFR-213ENST00000536843 SFTA2Q6UW10 78 aa12.03□□□□□ -0.48
CHFR-213ENST00000536843 NDUFA11Q86Y39 141 aa12.03□□□□□ -0.48
CHFR-213ENST00000536843 GAGE2DQ9UEU5 116 aa12.03□□□□□ -0.48
CHFR-213ENST00000536843 Q6Q795 121 aa12.02□□□□□ -0.48
CHFR-213ENST00000536843 PRADC1Q9BSG0 188 aa12.02□□□□□ -0.48
CHFR-213ENST00000536843 POLEQ07864 2286 aa12.02□□□□□ -0.49
CHFR-213ENST00000536843 ZNF815PA8K554 130 aa12.02□□□□□ -0.49
CHFR-213ENST00000536843 SRSF8Q9BRL6 282 aaKnown RBP12.02□□□□□ -0.49
CHFR-213ENST00000536843 TLN1Q9Y490 2541 aaKnown RBP12.02□□□□□ -0.49
CHFR-213ENST00000536843 COX6B1P14854 86 aa12.01□□□□□ -0.49
CHFR-213ENST00000536843 GRNP28799 593 aaKnown RBP12.01□□□□□ -0.49
CHFR-213ENST00000536843 SRSF9Q13242 221 aaKnown RBP eCLIP12.01□□□□□ -0.49
CHFR-213ENST00000536843 NEXN-AS1Q8NBZ9 246 aa12.01□□□□□ -0.49
CHFR-213ENST00000536843 KALRNO60229 2985 aa12.01□□□□□ -0.49
CHFR-213ENST00000536843 CCDC179H3BU77 68 aa12.01□□□□□ -0.49
CHFR-213ENST00000536843 SMIM20Q8N5G0 67 aa12.01□□□□□ -0.49
CHFR-213ENST00000536843 SPANXA1Q9NS26 97 aa12.01□□□□□ -0.49
CHFR-213ENST00000536843 RELNP78509 3460 aa12.01□□□□□ -0.49
CHFR-213ENST00000536843 SNCGO76070 127 aa12□□□□□ -0.49
CHFR-213ENST00000536843 SCGB1D4Q6XE38 83 aa12□□□□□ -0.49
CHFR-213ENST00000536843 PLEKHB2Q96CS7 222 aa12□□□□□ -0.49
CHFR-213ENST00000536843 NCOR2Q9Y618 2525 aa12□□□□□ -0.49
CHFR-213ENST00000536843 CENPVL3A0A0U1RRI6 287 aa12□□□□□ -0.49
CHFR-213ENST00000536843 TRGV3P03979 118 aa12□□□□□ -0.49
CHFR-213ENST00000536843 SLC25A16P16260 332 aa12□□□□□ -0.49
CHFR-213ENST00000536843 RAB1BQ9H0U4 201 aa12□□□□□ -0.49
CHFR-213ENST00000536843 CACNA1AO00555 2505 aa11.99□□□□□ -0.49
CHFR-213ENST00000536843 H3BVH4 76 aa11.99□□□□□ -0.49
CHFR-213ENST00000536843 IGHG4P01861 327 aa11.99□□□□□ -0.49
CHFR-213ENST00000536843 IFITM1P13164 125 aa11.99□□□□□ -0.49
CHFR-213ENST00000536843 RPL7P18124 248 aaKnown RBP11.99□□□□□ -0.49
CHFR-213ENST00000536843 TOMM6Q96B49 74 aa11.99□□□□□ -0.49
CHFR-213ENST00000536843 SCGB1C2P0DMR2 95 aa11.98□□□□□ -0.49
CHFR-213ENST00000536843 SCGB3A1Q96QR1 104 aa11.98□□□□□ -0.49
CHFR-213ENST00000536843 TRAV4A0A0B4J268 109 aa11.98□□□□□ -0.49
CHFR-213ENST00000536843 KLRB1Q12918 225 aa11.98□□□□□ -0.49
CHFR-213ENST00000536843 C10orf126Q8N4M7 172 aa11.98□□□□□ -0.49
CHFR-213ENST00000536843 SMIM2Q9BVW6 85 aa11.98□□□□□ -0.49
CHFR-213ENST00000536843 TRAV26-2A0A0B4J265 109 aa11.97□□□□□ -0.49
CHFR-213ENST00000536843 CNIH1O95406 144 aa11.97□□□□□ -0.49
CHFR-213ENST00000536843 ORMDL2Q53FV1 153 aa11.97□□□□□ -0.49
CHFR-213ENST00000536843 TTC32Q5I0X7 151 aa11.97□□□□□ -0.49
CHFR-213ENST00000536843 PRORYQ9H606 182 aa11.97□□□□□ -0.49
CHFR-213ENST00000536843 SLC25A20O43772 301 aa11.97□□□□□ -0.49
CHFR-213ENST00000536843 IGLV1-47P01700 117 aa11.97□□□□□ -0.49
CHFR-213ENST00000536843 COX7A1P24310 79 aa11.97□□□□□ -0.49
CHFR-213ENST00000536843 ERCC8Q13216 396 aa11.97□□□□□ -0.49
CHFR-213ENST00000536843 TNFRSF18Q9Y5U5 241 aa11.97□□□□□ -0.49
CHFR-213ENST00000536843 MALRD1Q5VYJ5 2156 aa11.96□□□□□ -0.49
CHFR-213ENST00000536843 TRAV8-2A0A0B4J237 113 aa11.96□□□□□ -0.49
CHFR-213ENST00000536843 CCL21O00585 134 aa11.96□□□□□ -0.49
CHFR-213ENST00000536843 CFC1BP0CG36 223 aa11.96□□□□□ -0.49
CHFR-213ENST00000536843 CFC1P0CG37 223 aa11.96□□□□□ -0.49
CHFR-213ENST00000536843 ANXA2RQ3ZCQ2 193 aa11.96□□□□□ -0.49
CHFR-213ENST00000536843 CFHR4Q92496 578 aa11.96□□□□□ -0.49
CHFR-213ENST00000536843 RASL10AQ92737 203 aa11.96□□□□□ -0.49
CHFR-213ENST00000536843 ABCA1O95477 2261 aa11.96□□□□□ -0.49
CHFR-213ENST00000536843 IGHV1-3A0A0C4DH29 117 aa11.96□□□□□ -0.5
CHFR-213ENST00000536843 CRLF1O75462 422 aa11.96□□□□□ -0.5
CHFR-213ENST00000536843 CDSNQ15517 529 aa11.96□□□□□ -0.5
CHFR-213ENST00000536843 IGHV4-4A0A075B6R2 117 aa11.95□□□□□ -0.5
CHFR-213ENST00000536843 IGKV3D-20A0A0C4DH25 116 aa11.95□□□□□ -0.5
CHFR-213ENST00000536843 A0A0J9YY99 117 aa11.95□□□□□ -0.5
CHFR-213ENST00000536843 BUB1B-PAK6H3BSN5 160 aa11.95□□□□□ -0.5
CHFR-213ENST00000536843 BAALCQ8WXS3 180 aa11.95□□□□□ -0.5
CHFR-213ENST00000536843 CHD8Q9HCK8 2581 aa11.95□□□□□ -0.5
CHFR-213ENST00000536843 PRTN3P24158 256 aa11.95□□□□□ -0.5
CHFR-213ENST00000536843 FBXL19-AS1Q494R0 122 aa11.95□□□□□ -0.5
CHFR-213ENST00000536843 BRI3O95415 125 aa11.94□□□□□ -0.5
CHFR-213ENST00000536843 DYNAPQ8N1N2 210 aa11.94□□□□□ -0.5
CHFR-213ENST00000536843 SMAD5-AS1Q9Y6J3 95 aa11.94□□□□□ -0.5
CHFR-213ENST00000536843 IGHV7-4-1A0A0J9YVY3 117 aa11.94□□□□□ -0.5
CHFR-213ENST00000536843 LY6HO94772 140 aa11.94□□□□□ -0.5
CHFR-213ENST00000536843 IGHV3-30P01768 117 aa11.94□□□□□ -0.5
CHFR-213ENST00000536843 IGHV3-30-5P0DP03 117 aa11.94□□□□□ -0.5
CHFR-213ENST00000536843 HLA-DMBP28068 263 aa11.94□□□□□ -0.5
CHFR-213ENST00000536843 PRO1854Q9UHT4 67 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms