RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 H7BYZ3 331 aa8.36□□□□□ -1.07
CDCA3-206ENST00000536241 SNAPINO95295 136 aa8.36□□□□□ -1.07
CDCA3-206ENST00000536241 DEFA6Q01524 100 aa8.36□□□□□ -1.07
CDCA3-206ENST00000536241 SBSPONQ8IVN8 264 aa8.36□□□□□ -1.07
CDCA3-206ENST00000536241 C15orf54Q8N8G6 183 aa8.36□□□□□ -1.07
CDCA3-206ENST00000536241 TP53TG3Q9ULZ0 132 aa8.36□□□□□ -1.07
CDCA3-206ENST00000536241 GOLT1BQ9Y3E0 138 aa8.36□□□□□ -1.07
CDCA3-206ENST00000536241 V9GYV3 84 aa8.36□□□□□ -1.07
CDCA3-206ENST00000536241 DNHD1Q96M86 4753 aa8.36□□□□□ -1.07
CDCA3-206ENST00000536241 GRIFINA4D1Z8 144 aa8.35□□□□□ -1.07
CDCA3-206ENST00000536241 B4DEV8 164 aa8.35□□□□□ -1.07
CDCA3-206ENST00000536241 MT-ND4LP03901 98 aa8.35□□□□□ -1.07
CDCA3-206ENST00000536241 AZU1P20160 251 aa8.35□□□□□ -1.07
CDCA3-206ENST00000536241 LINC01559Q495D7 138 aa8.35□□□□□ -1.07
CDCA3-206ENST00000536241 ATRAIDQ6UW56 229 aa8.35□□□□□ -1.07
CDCA3-206ENST00000536241 ZNF705AQ6ZN79 300 aaPredicted RBP8.35□□□□□ -1.07
CDCA3-206ENST00000536241 Q6ZWC4 215 aa8.35□□□□□ -1.07
CDCA3-206ENST00000536241 TMEM256Q8N2U0 113 aa8.35□□□□□ -1.07
CDCA3-206ENST00000536241 PYGO2Q9BRQ0 406 aa8.35□□□□□ -1.07
CDCA3-206ENST00000536241 RPP21Q9H633 154 aaKnown RBP8.35□□□□□ -1.07
CDCA3-206ENST00000536241 RPS10P5Q9NQ39 176 aa8.35□□□□□ -1.07
CDCA3-206ENST00000536241 NBEAL1Q6ZS30 2694 aa8.35□□□□□ -1.07
CDCA3-206ENST00000536241 CBY3A6NI87 242 aa8.34□□□□□ -1.07
CDCA3-206ENST00000536241 GZMBP10144 247 aa8.34□□□□□ -1.07
CDCA3-206ENST00000536241 S100A1P23297 94 aa8.34□□□□□ -1.07
CDCA3-206ENST00000536241 TDRG1Q3Y452 100 aa8.34□□□□□ -1.07
CDCA3-206ENST00000536241 RNF183Q96D59 192 aa8.34□□□□□ -1.07
CDCA3-206ENST00000536241 ANAPC16Q96DE5 110 aa8.34□□□□□ -1.07
CDCA3-206ENST00000536241 KCNS1Q96KK3 526 aa8.34□□□□□ -1.07
CDCA3-206ENST00000536241 RCHY1Q96PM5 261 aa8.34□□□□□ -1.07
CDCA3-206ENST00000536241 PPP1R2P9O14990 202 aa8.33□□□□□ -1.08
CDCA3-206ENST00000536241 SPRY2O43597 315 aa8.33□□□□□ -1.08
CDCA3-206ENST00000536241 TYMSP04818 313 aa8.33□□□□□ -1.08
CDCA3-206ENST00000536241 OR11H2Q8NH07 326 aa8.33□□□□□ -1.08
CDCA3-206ENST00000536241 OVOL2Q9BRP0 275 aa8.33□□□□□ -1.08
CDCA3-206ENST00000536241 LINC00467Q9BRT7 94 aa8.33□□□□□ -1.08
CDCA3-206ENST00000536241 MDFICQ9P1T7 246 aa8.33□□□□□ -1.08
CDCA3-206ENST00000536241 A8MWL6 223 aa8.32□□□□□ -1.08
CDCA3-206ENST00000536241 RPS20P60866 119 aaKnown RBP8.32□□□□□ -1.08
CDCA3-206ENST00000536241 RHEBQ15382 184 aa8.32□□□□□ -1.08
CDCA3-206ENST00000536241 CTDSP1Q9GZU7 261 aa8.32□□□□□ -1.08
CDCA3-206ENST00000536241 RETNQ9HD89 108 aa8.32□□□□□ -1.08
CDCA3-206ENST00000536241 X6R8D5 127 aa8.32□□□□□ -1.08
CDCA3-206ENST00000536241 IGHV3-16A0A0C4DH30 117 aa8.32□□□□□ -1.08
CDCA3-206ENST00000536241 XKRY2A2RUG3 117 aa8.32□□□□□ -1.08
CDCA3-206ENST00000536241 S100A4P26447 101 aaKnown RBP8.32□□□□□ -1.08
CDCA3-206ENST00000536241 RRN3P1Q2M238 152 aa8.32□□□□□ -1.08
CDCA3-206ENST00000536241 TSKUQ8WUA8 353 aa8.32□□□□□ -1.08
CDCA3-206ENST00000536241 NEU1Q99519 415 aa8.32□□□□□ -1.08
CDCA3-206ENST00000536241 TIMM8BQ9Y5J9 83 aaPredicted RBP8.32□□□□□ -1.08
CDCA3-206ENST00000536241 TRGV11A0A075B6L2 103 aa8.31□□□□□ -1.08
CDCA3-206ENST00000536241 A0A087WWC5 75 aa8.31□□□□□ -1.08
CDCA3-206ENST00000536241 SMIM9A6NGZ8 99 aa8.31□□□□□ -1.08
CDCA3-206ENST00000536241 ARMS2P0C7Q2 107 aa8.31□□□□□ -1.08
CDCA3-206ENST00000536241 RNASE3P12724 160 aaKnown RBP8.31□□□□□ -1.08
CDCA3-206ENST00000536241 ASIPP42127 132 aa8.31□□□□□ -1.08
CDCA3-206ENST00000536241 FAM3BP58499 235 aaPredicted RBP8.31□□□□□ -1.08
CDCA3-206ENST00000536241 CT83Q5H943 113 aa8.31□□□□□ -1.08
CDCA3-206ENST00000536241 GTSF1Q8WW33 167 aa8.31□□□□□ -1.08
CDCA3-206ENST00000536241 GSN-AS1Q9NRJ2 163 aa8.31□□□□□ -1.08
CDCA3-206ENST00000536241 IL36BQ9NZH7 164 aa8.31□□□□□ -1.08
CDCA3-206ENST00000536241 TP53TG1Q9Y2A0 90 aa8.31□□□□□ -1.08
CDCA3-206ENST00000536241 DNAH3Q8TD57 4116 aa8.3□□□□□ -1.08
CDCA3-206ENST00000536241 MUC21A0A0G2JKD1 596 aa8.3□□□□□ -1.08
CDCA3-206ENST00000536241 MUC21A0A140T8X8 626 aa8.3□□□□□ -1.08
CDCA3-206ENST00000536241 SMIM27A0A1W2PRY6 76 aa8.3□□□□□ -1.08
CDCA3-206ENST00000536241 TCL1AP56279 114 aa8.3□□□□□ -1.08
CDCA3-206ENST00000536241 SSTP61278 116 aa8.3□□□□□ -1.08
CDCA3-206ENST00000536241 DNLZQ5SXM8 178 aa8.3□□□□□ -1.08
CDCA3-206ENST00000536241 C11orf72Q8NBR9 251 aa8.3□□□□□ -1.08
CDCA3-206ENST00000536241 RNASE8Q8TDE3 154 aaKnown RBP8.3□□□□□ -1.08
CDCA3-206ENST00000536241 PGLYRP4Q96LB8 373 aa8.3□□□□□ -1.08
CDCA3-206ENST00000536241 TPPP3Q9BW30 176 aa8.3□□□□□ -1.08
CDCA3-206ENST00000536241 TMEM242Q9NWH2 141 aa8.3□□□□□ -1.08
CDCA3-206ENST00000536241 HIGD1CA8MV81 97 aa8.29□□□□□ -1.08
CDCA3-206ENST00000536241 H3BVH4 76 aa8.29□□□□□ -1.08
CDCA3-206ENST00000536241 CXCL1P09341 107 aa8.29□□□□□ -1.08
CDCA3-206ENST00000536241 IGLC6P0CF74 106 aa8.29□□□□□ -1.08
CDCA3-206ENST00000536241 FOXA3P55318 350 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-206ENST00000536241 LYZL1Q6UWQ5 148 aa8.29□□□□□ -1.08
CDCA3-206ENST00000536241 FER1L6-AS1Q8NA97 138 aa8.29□□□□□ -1.08
CDCA3-206ENST00000536241 TMEM263Q8WUH6 116 aaKnown RBP8.29□□□□□ -1.08
CDCA3-206ENST00000536241 TM2D3Q9BRN9 247 aa8.29□□□□□ -1.08
CDCA3-206ENST00000536241 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-206ENST00000536241 GFRA4Q9GZZ7 299 aa8.29□□□□□ -1.08
CDCA3-206ENST00000536241 A0A1W2PPQ1 181 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 FAM231BA6NCW3 169 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 DEFB4AO15263 64 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 SPINK4O60575 86 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 SCO1O75880 301 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 EMP1P54849 157 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 ZNF493Q6ZR52 646 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 NUP35Q8NFH5 326 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 C16orf74Q96GX8 76 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 C9orf85Q96MD7 179 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 B9D2Q9BPU9 175 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 SPATA25Q9BR10 227 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 URGCP-MRPS24S4R325 110 aa8.28□□□□□ -1.08
CDCA3-206ENST00000536241 MUC4Q99102 2169 aa8.27□□□□□ -1.08
CDCA3-206ENST00000536241 NBEAL2Q6ZNJ1 2754 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms