RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 NCOR2Q9Y618 2525 aa10.26□□□□□ -0.77
HDAC4-214ENST00000535493 CHD8Q9HCK8 2581 aa10.26□□□□□ -0.77
HDAC4-214ENST00000535493 A0A087WX48 190 aa10.26□□□□□ -0.77
HDAC4-214ENST00000535493 PIFOQ8TCI5 191 aa10.26□□□□□ -0.77
HDAC4-214ENST00000535493 HIF1ANQ9NWT6 349 aa10.26□□□□□ -0.77
HDAC4-214ENST00000535493 LINC01546A6NGU7 62 aa10.25□□□□□ -0.77
HDAC4-214ENST00000535493 ODF3BA8MYP8 253 aa10.25□□□□□ -0.77
HDAC4-214ENST00000535493 PRTN3P24158 256 aa10.25□□□□□ -0.77
HDAC4-214ENST00000535493 C14orf178Q8N769 122 aaPredicted RBP10.25□□□□□ -0.77
HDAC4-214ENST00000535493 KLHL30-AS1Q8NEE0 82 aa10.25□□□□□ -0.77
HDAC4-214ENST00000535493 GLMPQ8WWB7 406 aa10.25□□□□□ -0.77
HDAC4-214ENST00000535493 TGFAP01135 160 aa10.25□□□□□ -0.77
HDAC4-214ENST00000535493 C8orf86Q6ZUL3 223 aa10.25□□□□□ -0.77
HDAC4-214ENST00000535493 Q8N9W7 124 aa10.25□□□□□ -0.77
HDAC4-214ENST00000535493 CCDC140Q96MF4 163 aa10.25□□□□□ -0.77
HDAC4-214ENST00000535493 VKORC1Q9BQB6 163 aa10.25□□□□□ -0.77
HDAC4-214ENST00000535493 CD300EQ496F6 205 aaPredicted RBP10.24□□□□□ -0.77
HDAC4-214ENST00000535493 GAGE13Q4V321 117 aa10.24□□□□□ -0.77
HDAC4-214ENST00000535493 SCGB3A1Q96QR1 104 aa10.24□□□□□ -0.77
HDAC4-214ENST00000535493 C20orf78Q9BR46 151 aa10.24□□□□□ -0.77
HDAC4-214ENST00000535493 A0A1B0GWB2 263 aa10.24□□□□□ -0.77
HDAC4-214ENST00000535493 SRSF1Q07955 248 aaKnown RBP eCLIP10.24□□□□□ -0.77
HDAC4-214ENST00000535493 CCDC144NLQ6NUI1 221 aa10.24□□□□□ -0.77
HDAC4-214ENST00000535493 ZNF502Q8TBZ5 544 aa10.24□□□□□ -0.77
HDAC4-214ENST00000535493 ZNF48Q96MX3 618 aaPredicted RBP10.24□□□□□ -0.77
HDAC4-214ENST00000535493 HLA-DRB4P13762 266 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 Q5PR19 223 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 SMPXQ9UHP9 88 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 HLA-DRB4X5D2U9 266 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 OR11H12B2RN74 326 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 F8W1H4 67 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 MGPP08493 103 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 SCGB2A2Q13296 93 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 TMEM219Q86XT9 240 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 OR11H1Q8NG94 326 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 OR11H2Q8NH07 326 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 PTH2Q96A98 100 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 PLEKHB2Q96CS7 222 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 PGPEP1Q9NXJ5 209 aa10.23□□□□□ -0.77
HDAC4-214ENST00000535493 CHTOPQ9Y3Y2 248 aaKnown RBP10.23□□□□□ -0.77
HDAC4-214ENST00000535493 IGHV3OR16-10A0A075B7F0 116 aa10.22□□□□□ -0.77
HDAC4-214ENST00000535493 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
HDAC4-214ENST00000535493 F6UB75 175 aa10.22□□□□□ -0.77
HDAC4-214ENST00000535493 ZFP2Q6ZN57 461 aa10.22□□□□□ -0.77
HDAC4-214ENST00000535493 C20orf173Q96LM9 149 aa10.22□□□□□ -0.77
HDAC4-214ENST00000535493 TRBV7-3A0A075B6L6 115 aa10.22□□□□□ -0.77
HDAC4-214ENST00000535493 CCL21O00585 134 aa10.22□□□□□ -0.77
HDAC4-214ENST00000535493 RRN3P1Q2M238 152 aa10.22□□□□□ -0.77
HDAC4-214ENST00000535493 Q8N6K4 173 aa10.22□□□□□ -0.77
HDAC4-214ENST00000535493 C16orf92Q96LL3 132 aa10.22□□□□□ -0.77
HDAC4-214ENST00000535493 LOC107984156A0A0G2JMH3 177 aa10.21□□□□□ -0.77
HDAC4-214ENST00000535493 MYMXA0A1B0GTQ4 84 aa10.21□□□□□ -0.77
HDAC4-214ENST00000535493 F8VRH5 84 aa10.21□□□□□ -0.77
HDAC4-214ENST00000535493 MORN3Q6PF18 240 aaPredicted RBP10.21□□□□□ -0.77
HDAC4-214ENST00000535493 ARL17AQ8IVW1 177 aa10.21□□□□□ -0.77
HDAC4-214ENST00000535493 TIMD4Q96H15 378 aa10.21□□□□□ -0.77
HDAC4-214ENST00000535493 SMIM2Q9BVW6 85 aa10.21□□□□□ -0.77
HDAC4-214ENST00000535493 CSPG4Q6UVK1 2322 aa10.21□□□□□ -0.78
HDAC4-214ENST00000535493 APOMO95445 188 aa10.21□□□□□ -0.78
HDAC4-214ENST00000535493 S100A4P26447 101 aaKnown RBP10.21□□□□□ -0.78
HDAC4-214ENST00000535493 IGF2-ASQ6U949 168 aa10.21□□□□□ -0.78
HDAC4-214ENST00000535493 SCGB1D4Q6XE38 83 aa10.21□□□□□ -0.78
HDAC4-214ENST00000535493 ZNF418Q8TF45 676 aaPredicted RBP10.21□□□□□ -0.78
HDAC4-214ENST00000535493 RASL10AQ92737 203 aa10.21□□□□□ -0.78
HDAC4-214ENST00000535493 MRPL16Q9NX20 251 aaKnown RBP10.21□□□□□ -0.78
HDAC4-214ENST00000535493 HIVEP3Q5T1R4 2406 aa10.21□□□□□ -0.78
HDAC4-214ENST00000535493 DOPEY2Q9Y3R5 2298 aa10.21□□□□□ -0.78
HDAC4-214ENST00000535493 LINC01549A6NIU2 74 aa10.2□□□□□ -0.78
HDAC4-214ENST00000535493 H7C1H1 209 aa10.2□□□□□ -0.78
HDAC4-214ENST00000535493 CIDEAO60543 219 aa10.2□□□□□ -0.78
HDAC4-214ENST00000535493 LGALS1P09382 135 aaKnown RBP10.2□□□□□ -0.78
HDAC4-214ENST00000535493 PRADC1Q9BSG0 188 aa10.2□□□□□ -0.78
HDAC4-214ENST00000535493 PRO0461Q9UI25 63 aa10.2□□□□□ -0.78
HDAC4-214ENST00000535493 RAXQ9Y2V3 346 aa10.2□□□□□ -0.78
HDAC4-214ENST00000535493 GNRH2O43555 120 aa10.2□□□□□ -0.78
HDAC4-214ENST00000535493 SLC25A16P16260 332 aa10.2□□□□□ -0.78
HDAC4-214ENST00000535493 PLNP26678 52 aa10.2□□□□□ -0.78
HDAC4-214ENST00000535493 RPL11P62913 178 aaKnown RBP10.2□□□□□ -0.78
HDAC4-214ENST00000535493 HOXA3O43365 443 aaPredicted RBP10.2□□□□□ -0.78
HDAC4-214ENST00000535493 SUMO2P61956 95 aaKnown RBP10.2□□□□□ -0.78
HDAC4-214ENST00000535493 SRSF2Q01130 221 aaKnown RBP10.2□□□□□ -0.78
HDAC4-214ENST00000535493 SRSF9Q13242 221 aaKnown RBP eCLIP10.2□□□□□ -0.787e-6■■■■□ 20
HDAC4-214ENST00000535493 ZNF815PA8K554 130 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 SCGB2A1O75556 95 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 TRBV12-3P01733 135 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 C2orf66Q6UXQ4 117 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 METTL26Q96S19 204 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 SPTBN4Q9H254 2564 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 SRD5A1P18405 259 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 ARL3P36405 182 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 PSMB2P49721 201 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 TMEM190Q8WZ59 177 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 CLUHP3Q96NS8 147 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 SLC50A1Q9BRV3 221 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 JPT2Q9H910 190 aa10.19□□□□□ -0.78
HDAC4-214ENST00000535493 M0R1W7 72 aa10.18□□□□□ -0.78
HDAC4-214ENST00000535493 NDUFS8O00217 210 aa10.18□□□□□ -0.78
HDAC4-214ENST00000535493 SMCPP49901 116 aaPredicted RBP10.18□□□□□ -0.78
HDAC4-214ENST00000535493 UNQ9165/PRO28630Q6UXU0 137 aa10.18□□□□□ -0.78
HDAC4-214ENST00000535493 NFE4Q86UQ8 179 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms