RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 IGHV3-74A0A0B4J1X5 117 aa11.88□□□□□ -0.51
USP35-206ENST00000530535 B4DSR2 109 aa11.88□□□□□ -0.51
USP35-206ENST00000530535 Q5PR19 223 aa11.88□□□□□ -0.51
USP35-206ENST00000530535 U3KQE9 123 aa11.88□□□□□ -0.51
USP35-206ENST00000530535 SAA4P35542 130 aa11.87□□□□□ -0.51
USP35-206ENST00000530535 Q8N8P6 123 aa11.87□□□□□ -0.51
USP35-206ENST00000530535 MRPL53Q96EL3 112 aaKnown RBP11.87□□□□□ -0.51
USP35-206ENST00000530535 ZNF469Q96JG9 3925 aaPredicted RBP11.87□□□□□ -0.51
USP35-206ENST00000530535 Q6ZQT7 251 aa11.87□□□□□ -0.51
USP35-206ENST00000530535 NRACQ8N912 160 aa11.87□□□□□ -0.51
USP35-206ENST00000530535 TMEM158Q8WZ71 300 aa11.87□□□□□ -0.51
USP35-206ENST00000530535 APCP25054 2843 aa11.87□□□□□ -0.51
USP35-206ENST00000530535 IGHV3-49A0A0A0MS15 119 aa11.86□□□□□ -0.51
USP35-206ENST00000530535 GAGE10A6NGK3 116 aa11.86□□□□□ -0.51
USP35-206ENST00000530535 C8orf86Q6ZUL3 223 aa11.86□□□□□ -0.51
USP35-206ENST00000530535 NAV2Q8IVL1 2488 aa11.86□□□□□ -0.51
USP35-206ENST00000530535 CENPVL3A0A0U1RRI6 287 aa11.86□□□□□ -0.51
USP35-206ENST00000530535 PRSS47A8MTI9 375 aa11.86□□□□□ -0.51
USP35-206ENST00000530535 H3BUT2 72 aa11.86□□□□□ -0.51
USP35-206ENST00000530535 C9orf47Q6ZRZ4 202 aa11.86□□□□□ -0.51
USP35-206ENST00000530535 OR2K2Q8NGT1 345 aa11.86□□□□□ -0.51
USP35-206ENST00000530535 NAA38Q9BRA0 125 aaKnown RBP11.86□□□□□ -0.51
USP35-206ENST00000530535 HIF1ANQ9NWT6 349 aa11.86□□□□□ -0.51
USP35-206ENST00000530535 ZANQ9Y493 2812 aa11.85□□□□□ -0.51
USP35-206ENST00000530535 A0A0G2JLM5 398 aa11.85□□□□□ -0.51
USP35-206ENST00000530535 RNF223E7ERA6 249 aa11.85□□□□□ -0.51
USP35-206ENST00000530535 K7EP34 96 aa11.85□□□□□ -0.51
USP35-206ENST00000530535 ZNF207O43670 478 aaKnown RBP11.85□□□□□ -0.51
USP35-206ENST00000530535 LINC01356Q8N9X3 169 aa11.85□□□□□ -0.51
USP35-206ENST00000530535 EEF1AKMT3Q96AZ1 226 aa11.85□□□□□ -0.51
USP35-206ENST00000530535 TTTY13Q9BZ97 58 aa11.85□□□□□ -0.51
USP35-206ENST00000530535 IGHV4-4A0A075B6R2 117 aa11.84□□□□□ -0.51
USP35-206ENST00000530535 PSMG4Q5JS54 123 aa11.84□□□□□ -0.51
USP35-206ENST00000530535 MAPK1IP1LQ8NDC0 245 aa11.84□□□□□ -0.51
USP35-206ENST00000530535 METTL26Q96S19 204 aa11.84□□□□□ -0.51
USP35-206ENST00000530535 HIGD1BQ9P298 99 aa11.84□□□□□ -0.51
USP35-206ENST00000530535 TRBV7-1A0A0A6YYK4 115 aa11.84□□□□□ -0.51
USP35-206ENST00000530535 NPFFO15130 113 aa11.84□□□□□ -0.51
USP35-206ENST00000530535 IGKCP01834 107 aa11.84□□□□□ -0.51
USP35-206ENST00000530535 TMEM78Q5T7P6 136 aa11.84□□□□□ -0.51
USP35-206ENST00000530535 C5orf56Q8N8D9 126 aa11.84□□□□□ -0.51
USP35-206ENST00000530535 FOXC2Q99958 501 aa11.84□□□□□ -0.51
USP35-206ENST00000530535 GCN1Q92616 2671 aaKnown RBP11.83□□□□□ -0.52
USP35-206ENST00000530535 PRSS1P07477 247 aa11.83□□□□□ -0.52
USP35-206ENST00000530535 GATA3P23771 443 aa11.83□□□□□ -0.52
USP35-206ENST00000530535 PRR9Q5T870 116 aa11.83□□□□□ -0.52
USP35-206ENST00000530535 GTF2H5Q6ZYL4 71 aa11.83□□□□□ -0.52
USP35-206ENST00000530535 KRTAP1-3Q8IUG1 177 aa11.83□□□□□ -0.52
USP35-206ENST00000530535 Q96MF0 132 aa11.83□□□□□ -0.52
USP35-206ENST00000530535 TRAV26-2A0A0B4J265 109 aa11.83□□□□□ -0.52
USP35-206ENST00000530535 ATP5LO75964 103 aa11.83□□□□□ -0.52
USP35-206ENST00000530535 SMIM17P0DL12 118 aa11.83□□□□□ -0.52
USP35-206ENST00000530535 C19orf54Q5BKX5 351 aa11.83□□□□□ -0.52
USP35-206ENST00000530535 AP1S3Q96PC3 154 aa11.83□□□□□ -0.52
USP35-206ENST00000530535 IGHV1-69DA0A0B4J2H0 117 aa11.82□□□□□ -0.52
USP35-206ENST00000530535 IGHV1-69P01742 117 aa11.82□□□□□ -0.52
USP35-206ENST00000530535 TM4SF20Q53R12 229 aa11.82□□□□□ -0.52
USP35-206ENST00000530535 RAB37Q96AX2 223 aa11.82□□□□□ -0.52
USP35-206ENST00000530535 IGHV3OR16-10A0A075B7F0 116 aa11.81□□□□□ -0.52
USP35-206ENST00000530535 DPM2O94777 84 aa11.81□□□□□ -0.52
USP35-206ENST00000530535 FXYD2P54710 66 aa11.81□□□□□ -0.52
USP35-206ENST00000530535 GLMPQ8WWB7 406 aa11.81□□□□□ -0.52
USP35-206ENST00000530535 C20orf173Q96LM9 149 aa11.81□□□□□ -0.52
USP35-206ENST00000530535 SMPXQ9UHP9 88 aa11.81□□□□□ -0.52
USP35-206ENST00000530535 TRAV40A0A0B4J280 105 aa11.81□□□□□ -0.52
USP35-206ENST00000530535 A0A1W2PPM0 123 aa11.81□□□□□ -0.52
USP35-206ENST00000530535 ZC2HC1BQ5TFG8 222 aa11.81□□□□□ -0.52
USP35-206ENST00000530535 GTSCR1Q86UQ5 136 aa11.81□□□□□ -0.52
USP35-206ENST00000530535 CHAC1Q9BUX1 264 aa11.81□□□□□ -0.52
USP35-206ENST00000530535 SAP30O75446 220 aa11.8□□□□□ -0.52
USP35-206ENST00000530535 TGFAP01135 160 aa11.8□□□□□ -0.52
USP35-206ENST00000530535 HLA-DRB4P13762 266 aa11.8□□□□□ -0.52
USP35-206ENST00000530535 LAGE3Q14657 143 aa11.8□□□□□ -0.52
USP35-206ENST00000530535 VPS25Q9BRG1 176 aa11.8□□□□□ -0.52
USP35-206ENST00000530535 UFC1Q9Y3C8 167 aa11.8□□□□□ -0.52
USP35-206ENST00000530535 SELENOKQ9Y6D0 94 aa11.8□□□□□ -0.52
USP35-206ENST00000530535 HLA-DRB4X5D2U9 266 aa11.8□□□□□ -0.52
USP35-206ENST00000530535 TRBV25-1A0A075B6N4 114 aa11.8□□□□□ -0.52
USP35-206ENST00000530535 K7ERU9 68 aa11.8□□□□□ -0.52
USP35-206ENST00000530535 IGHV4-38-2P0DP08 117 aa11.8□□□□□ -0.52
USP35-206ENST00000530535 MRPL35Q9NZE8 188 aaKnown RBP11.8□□□□□ -0.52
USP35-206ENST00000530535 H3BVH4 76 aa11.79□□□□□ -0.52
USP35-206ENST00000530535 AVPP01185 164 aa11.79□□□□□ -0.52
USP35-206ENST00000530535 IGF1P05019 195 aa11.79□□□□□ -0.52
USP35-206ENST00000530535 IGHV4-31P0DP07 118 aa11.79□□□□□ -0.52
USP35-206ENST00000530535 ATP5G2Q06055 141 aa11.79□□□□□ -0.52
USP35-206ENST00000530535 BRD3OSQ6XYD6 125 aa11.79□□□□□ -0.52
USP35-206ENST00000530535 GPHB5Q86YW7 130 aa11.79□□□□□ -0.52
USP35-206ENST00000530535 PHLDA1Q8WV24 401 aaPredicted RBP11.79□□□□□ -0.52
USP35-206ENST00000530535 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.79□□□□□ -0.522e-6■■■□□ 15.6
USP35-206ENST00000530535 GCSHP23434 173 aa11.78□□□□□ -0.52
USP35-206ENST00000530535 SMIM15Q7Z3B0 74 aa11.78□□□□□ -0.52
USP35-206ENST00000530535 TMEM219Q86XT9 240 aa11.78□□□□□ -0.52
USP35-206ENST00000530535 ATP6V0BQ99437 205 aa11.78□□□□□ -0.52
USP35-206ENST00000530535 J3QLI3 93 aa11.78□□□□□ -0.52
USP35-206ENST00000530535 CRIP2P52943 208 aaPredicted RBP11.78□□□□□ -0.52
USP35-206ENST00000530535 SPANXN1Q5VSR9 72 aa11.78□□□□□ -0.52
USP35-206ENST00000530535 C9orf139Q6ZV77 190 aa11.78□□□□□ -0.52
USP35-206ENST00000530535 C16orf92Q96LL3 132 aa11.78□□□□□ -0.52
USP35-206ENST00000530535 LENEPQ9Y5L5 61 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms