RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 SURF2Q15527 256 aaPredicted RBP2.4□□□□□ -2.03
PTPRC-213ENST00000529828 NEDD8Q15843 81 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 MRPL23Q16540 153 aaKnown RBP2.4□□□□□ -2.03
PTPRC-213ENST00000529828 NMSQ5H8A3 153 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 COL5A1-AS1Q5SY13 56 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 AKR1C8PQ5T2L2 129 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM268Q5VZI3 342 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 FAAP20Q6NZ36 180 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 Q6ZTI0 123 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 OR10J6PQ8NGY7 276 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 OR52E5Q8NH55 327 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 MCFD2Q8NI22 146 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 SLC35E1Q96K37 410 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 SMIM8Q96KF7 97 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 FAM30AQ9NZY2 134 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 PLA2G2DQ9UNK4 145 aa2.4□□□□□ -2.03
PTPRC-213ENST00000529828 IGKV1OR2-108A0A075B7D4 117 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 IGLV5-52A0A0A0MRZ9 124 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM218A2RU14 115 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 SNRPGP15A8MWD9 76 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 HPGDSO60760 199 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 IGHV3-53P01767 116 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 APOC3P02656 99 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 IFITM3Q01628 133 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 BAXQ07812 192 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 VWC2Q2TAL6 325 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 C1orf194Q5T5A4 169 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 PRR27Q6MZM9 219 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 LHFPL1Q86WI0 220 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 NIT1Q86X76 327 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 SYT8Q8NBV8 401 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM263Q8WUH6 116 aaKnown RBP2.39□□□□□ -2.03
PTPRC-213ENST00000529828 IL22RA2Q969J5 263 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 MRAP2Q96G30 205 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 VSIG2Q96IQ7 327 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 SOSTQ9BQB4 213 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM222Q9H0R3 208 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 RBKSQ9H477 322 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 COMMD3Q9UBI1 195 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 FAM74A7A6NL05 159 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 KRTAP29-1A8MX34 341 aaPredicted RBP2.39□□□□□ -2.03
PTPRC-213ENST00000529828 SNURFLB1AK76 121 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 GABARAPH6UMI1 98 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 HSBP1O75506 76 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 TYMSP04818 313 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 HOXB5P09067 269 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 IAPPP10997 89 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 EIF5AP63241 154 aaKnown RBP2.39□□□□□ -2.03
PTPRC-213ENST00000529828 GAGE5Q13069 117 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 GAGE6Q13070 117 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM241Q24JQ0 296 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 FAM74A3Q4VXF1 159 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM128Q5BJH2 165 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 GFI1BQ5VTD9 330 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 UQCC3Q6UW78 93 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 SMIM20Q8N5G0 67 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 C15orf54Q8N8G6 183 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 OR8A1Q8NGG7 326 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 OR4D5Q8NGN0 318 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 OR1B1Q8NGR6 318 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 SLIRPQ9GZT3 109 aaKnown RBP2.39□□□□□ -2.03
PTPRC-213ENST00000529828 CST9LQ9H4G1 147 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 NAA60Q9H7X0 242 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 V9GYY9 64 aa2.39□□□□□ -2.03
PTPRC-213ENST00000529828 TRGV2A0A075B6R0 118 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 H3BTX0 84 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 CCL25O15444 150 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 CDS2O95674 445 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 GIPP09681 153 aaPredicted RBP2.38□□□□□ -2.03
PTPRC-213ENST00000529828 SULT1A3P0DMM9 295 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 SULT1A4P0DMN0 295 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 HIST1H1EP10412 219 aaKnown RBP2.38□□□□□ -2.03
PTPRC-213ENST00000529828 PLP1P60201 277 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 SERTAD4-AS1Q5TG53 156 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 EIF5AL1Q6IS14 154 aaKnown RBP2.38□□□□□ -2.03
PTPRC-213ENST00000529828 WFDC10BQ8IUB3 73 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM256Q8N2U0 113 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 LINC00612Q8N6U2 182 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 OR51S1Q8NGJ8 323 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 OR52I2Q8NH67 350 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 C20orf144Q9BQM9 153 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 RTBDNQ9BSG5 229 aaPredicted RBP2.38□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM147Q9BVK8 224 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 SPANXB1Q9NS25 103 aaPredicted RBP2.38□□□□□ -2.03
PTPRC-213ENST00000529828 SPANXCQ9NY87 97 aa2.38□□□□□ -2.03
PTPRC-213ENST00000529828 TRGV1A0A0A0MS02 117 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 TRAV12-3A0A0B4J271 114 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 A0A0B4J2A0 478 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 PRAC2D3DTV9 90 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 H7BYZ3 331 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 MT-ND4LP03901 98 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 IL5P05113 134 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 CXCL3P19876 107 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 MALP21145 153 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 FAM74A1Q5RGS3 127 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 ZNF493Q6ZR52 646 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 NFE4Q86UQ8 179 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 TRGV9Q99603 122 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 SIGMAR1Q99720 223 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms