RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PRKDCP78527 4128 aaKnown RBP9.57□□□□□ -0.88
CPNE3-205ENST00000522240 TRAV12-2A0A075B6T6 113 aa9.56□□□□□ -0.88
CPNE3-205ENST00000522240 LOC102724200A0A096LPH7 203 aaPredicted RBP9.56□□□□□ -0.88
CPNE3-205ENST00000522240 KIR2DL5BA0A0G2JN68 375 aa9.56□□□□□ -0.88
CPNE3-205ENST00000522240 KIR2DL5BA0A0G2JPC4 375 aa9.56□□□□□ -0.88
CPNE3-205ENST00000522240 XKRY2A2RUG3 117 aa9.56□□□□□ -0.88
CPNE3-205ENST00000522240 CXorf65A6NEN9 183 aa9.56□□□□□ -0.88
CPNE3-205ENST00000522240 A8MZ25 164 aa9.56□□□□□ -0.88
CPNE3-205ENST00000522240 ZNF324O75467 553 aaPredicted RBP9.56□□□□□ -0.88
CPNE3-205ENST00000522240 RPL35AP18077 110 aaKnown RBP9.56□□□□□ -0.88
CPNE3-205ENST00000522240 RPS20P60866 119 aaKnown RBP9.56□□□□□ -0.88
CPNE3-205ENST00000522240 KIR2DL5AQ8N109 375 aa9.56□□□□□ -0.88
CPNE3-205ENST00000522240 OR2D3Q8NGH3 330 aa9.56□□□□□ -0.88
CPNE3-205ENST00000522240 KIR2DL5BQ8NHK3 375 aa9.56□□□□□ -0.88
CPNE3-205ENST00000522240 TRAV12-3A0A0B4J271 114 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 TMEM189A5PLL7 270 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 FAM231BA6NCW3 169 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 A8MWL6 223 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 IGHV4-30-4P0DP06 118 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 FXYD7P58549 80 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 TDRG1Q3Y452 100 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 TMEM256Q8N2U0 113 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 TSKUQ8WUA8 353 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 IMMP2LQ96T52 175 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 LINC00467Q9BRT7 94 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 GFRA4Q9GZZ7 299 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 TUBA4BQ9H853 241 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 IL36BQ9NZH7 164 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 C11orf21Q9P2W6 132 aa9.55□□□□□ -0.88
CPNE3-205ENST00000522240 DNAH3Q8TD57 4116 aa9.54□□□□□ -0.88
CPNE3-205ENST00000522240 IGKV3D-20A0A0C4DH25 116 aa9.54□□□□□ -0.88
CPNE3-205ENST00000522240 CA1P00915 261 aaPredicted RBP9.54□□□□□ -0.88
CPNE3-205ENST00000522240 ORM1P02763 201 aa9.54□□□□□ -0.88
CPNE3-205ENST00000522240 GIG44P09565 113 aaPredicted RBP9.54□□□□□ -0.88
CPNE3-205ENST00000522240 APOC4P55056 127 aa9.54□□□□□ -0.88
CPNE3-205ENST00000522240 KCNS1Q96KK3 526 aa9.54□□□□□ -0.88
CPNE3-205ENST00000522240 CSTL1Q9H114 145 aa9.54□□□□□ -0.88
CPNE3-205ENST00000522240 SMCO4Q9NRQ5 59 aa9.54□□□□□ -0.88
CPNE3-205ENST00000522240 RBMY1A1P0DJD3 496 aaKnown RBP9.53□□□□□ -0.88
CPNE3-205ENST00000522240 RBMY1CP0DJD4 496 aa9.53□□□□□ -0.88
CPNE3-205ENST00000522240 RPL19P84098 196 aaKnown RBP9.53□□□□□ -0.88
CPNE3-205ENST00000522240 RBMY1FQ15415 496 aaKnown RBP9.53□□□□□ -0.88
CPNE3-205ENST00000522240 ANXA2RQ3ZCQ2 193 aa9.53□□□□□ -0.88
CPNE3-205ENST00000522240 KCNIP4Q6PIL6 250 aa9.53□□□□□ -0.88
CPNE3-205ENST00000522240 FAM159AQ6UWV7 190 aa9.53□□□□□ -0.88
CPNE3-205ENST00000522240 PYGO2Q9BRQ0 406 aa9.53□□□□□ -0.88
CPNE3-205ENST00000522240 XCL2Q9UBD3 114 aa9.53□□□□□ -0.88
CPNE3-205ENST00000522240 TRAV9-1A0A075B6T8 112 aa9.52□□□□□ -0.89
CPNE3-205ENST00000522240 IGHV1OR15-1A0A075B7D0 117 aa9.52□□□□□ -0.89
CPNE3-205ENST00000522240 SMIM27A0A1W2PRY6 76 aa9.52□□□□□ -0.89
CPNE3-205ENST00000522240 UBE2CO00762 179 aa9.52□□□□□ -0.89
CPNE3-205ENST00000522240 S100PP25815 95 aa9.52□□□□□ -0.89
CPNE3-205ENST00000522240 DNLZQ5SXM8 178 aa9.52□□□□□ -0.89
CPNE3-205ENST00000522240 Q6ZQT7 251 aa9.52□□□□□ -0.89
CPNE3-205ENST00000522240 NEU1Q99519 415 aa9.52□□□□□ -0.89
CPNE3-205ENST00000522240 NAGKQ9UJ70 344 aa9.52□□□□□ -0.89
CPNE3-205ENST00000522240 GOLT1BQ9Y3E0 138 aa9.52□□□□□ -0.89
CPNE3-205ENST00000522240 TRGV11A0A075B6L2 103 aa9.51□□□□□ -0.89
CPNE3-205ENST00000522240 A0A1W2PPQ1 181 aa9.51□□□□□ -0.89
CPNE3-205ENST00000522240 SCO1O75880 301 aa9.51□□□□□ -0.89
CPNE3-205ENST00000522240 MED14OSP0DP75 135 aa9.51□□□□□ -0.89
CPNE3-205ENST00000522240 FOXA3P55318 350 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-205ENST00000522240 MUC21Q5SSG8 566 aa9.51□□□□□ -0.89
CPNE3-205ENST00000522240 CBLN2Q8IUK8 224 aa9.51□□□□□ -0.89
CPNE3-205ENST00000522240 C1orf158Q8N1D5 194 aa9.51□□□□□ -0.89
CPNE3-205ENST00000522240 CSNK1G2-AS1Q8NCQ2 148 aa9.51□□□□□ -0.89
CPNE3-205ENST00000522240 NAT8BQ9UHF3 227 aa9.51□□□□□ -0.89
CPNE3-205ENST00000522240 TMSB15BA0A087X1C1 80 aa9.5□□□□□ -0.89
CPNE3-205ENST00000522240 TYMSP04818 313 aa9.5□□□□□ -0.89
CPNE3-205ENST00000522240 IGLC6P0CF74 106 aa9.5□□□□□ -0.89
CPNE3-205ENST00000522240 CTRLP40313 264 aa9.5□□□□□ -0.89
CPNE3-205ENST00000522240 ASIPP42127 132 aa9.5□□□□□ -0.89
CPNE3-205ENST00000522240 TMEM88Q6PEY1 159 aa9.5□□□□□ -0.89
CPNE3-205ENST00000522240 ZNF575Q86XF7 245 aa9.5□□□□□ -0.89
CPNE3-205ENST00000522240 BTF3L4Q96K17 158 aa9.5□□□□□ -0.89
CPNE3-205ENST00000522240 HIGD1CA8MV81 97 aa9.49□□□□□ -0.89
CPNE3-205ENST00000522240 SNAI2O43623 268 aa9.49□□□□□ -0.89
CPNE3-205ENST00000522240 GZMBP10144 247 aa9.49□□□□□ -0.89
CPNE3-205ENST00000522240 TCL1AP56279 114 aa9.49□□□□□ -0.89
CPNE3-205ENST00000522240 ZNF705AQ6ZN79 300 aaPredicted RBP9.49□□□□□ -0.89
CPNE3-205ENST00000522240 FER1L6-AS1Q8NA97 138 aa9.49□□□□□ -0.89
CPNE3-205ENST00000522240 GTSF1Q8WW33 167 aa9.49□□□□□ -0.89
CPNE3-205ENST00000522240 YPEL4Q96NS1 127 aa9.49□□□□□ -0.89
CPNE3-205ENST00000522240 LINC01587Q99440 93 aa9.49□□□□□ -0.89
CPNE3-205ENST00000522240 TMEM208Q9BTX3 173 aa9.49□□□□□ -0.89
CPNE3-205ENST00000522240 F2Z2F3 143 aa9.48□□□□□ -0.89
CPNE3-205ENST00000522240 OR5AL1P0C617 328 aa9.48□□□□□ -0.89
CPNE3-205ENST00000522240 S100A4P26447 101 aaKnown RBP9.48□□□□□ -0.89
CPNE3-205ENST00000522240 ELOBQ15370 118 aa9.48□□□□□ -0.89
CPNE3-205ENST00000522240 NUP35Q8NFH5 326 aa9.48□□□□□ -0.89
CPNE3-205ENST00000522240 SSBP4Q9BWG4 385 aaPredicted RBP9.48□□□□□ -0.89
CPNE3-205ENST00000522240 CNFNQ9BYD5 112 aa9.48□□□□□ -0.89
CPNE3-205ENST00000522240 TP53TG3Q9ULZ0 132 aa9.48□□□□□ -0.89
CPNE3-205ENST00000522240 URGCP-MRPS24S4R325 110 aa9.48□□□□□ -0.89
CPNE3-205ENST00000522240 TRBV24-1A0A075B6N3 115 aa9.47□□□□□ -0.89
CPNE3-205ENST00000522240 IGHV3-16A0A0C4DH30 117 aa9.47□□□□□ -0.89
CPNE3-205ENST00000522240 GRIFINA4D1Z8 144 aa9.47□□□□□ -0.89
CPNE3-205ENST00000522240 CBY3A6NI87 242 aa9.47□□□□□ -0.89
CPNE3-205ENST00000522240 K7EIL1 84 aa9.47□□□□□ -0.89
CPNE3-205ENST00000522240 FRMD6-AS1P0C7T7 363 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms