RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 GPX7Q96SL4 187 aaPredicted RBP-3.79□□□□□ -3.02
SNORA40.16-201ENST00000517238 GEMIN7Q9H840 131 aaKnown RBP-3.79□□□□□ -3.02
SNORA40.16-201ENST00000517238 PHIPQ8WWQ0 1821 aa-3.79□□□□□ -3.02
SNORA40.16-201ENST00000517238 PPIP5K1Q6PFW1 1433 aa-3.79□□□□□ -3.02
SNORA40.16-201ENST00000517238 TRBV7-4A0A0J9YYF1 115 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 DAPL1A0PJW8 107 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 SERPINA1P01009 418 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 NEFHP12036 1026 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 EDDM3BP56851 147 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 RAB5BP61020 215 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 NPC2P61916 151 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 HEPN1Q6WQI6 88 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 EIF3MQ7L2H7 374 aaKnown RBP-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 FAM228AQ86W67 206 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 BAGE3Q86Y29 109 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 SYCE1Q8N0S2 351 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 OR6N2Q8NGY6 317 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 STAG3L4Q8TBR4 150 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 IFT81Q8WYA0 676 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 ATP6V1E2Q96A05 226 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 GCNT4Q9P109 453 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 DOCK5Q9H7D0 1870 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 TMEM94Q12767 1356 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 MYOM3Q5VTT5 1437 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 FGD6Q6ZV73 1430 aa-3.8□□□□□ -3.02
SNORA40.16-201ENST00000517238 CDC42BPAQ5VT25 1732 aa-3.81□□□□□ -3.02
SNORA40.16-201ENST00000517238 A0A1B0GTQ1 180 aa-3.81□□□□□ -3.02
SNORA40.16-201ENST00000517238 A8MT66 165 aa-3.81□□□□□ -3.02
SNORA40.16-201ENST00000517238 WBP4O75554 376 aaKnown RBP-3.81□□□□□ -3.02
SNORA40.16-201ENST00000517238 ADAP1O75689 374 aa-3.81□□□□□ -3.02
SNORA40.16-201ENST00000517238 CST4P01036 141 aa-3.81□□□□□ -3.02
SNORA40.16-201ENST00000517238 OR5G3P0C626 314 aa-3.81□□□□□ -3.02
SNORA40.16-201ENST00000517238 ERP29P30040 261 aaKnown RBP-3.81□□□□□ -3.02
SNORA40.16-201ENST00000517238 VPS29Q9UBQ0 182 aa-3.81□□□□□ -3.02
SNORA40.16-201ENST00000517238 H7BZZ5 65 aa-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 S100A5P33763 92 aa-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 HIST3H3Q16695 136 aa-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 CCSMST1Q4G0I0 132 aa-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 OR2T2Q6IF00 324 aa-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 MRPL52Q86TS9 123 aaKnown RBP-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 Q8N8P6 123 aa-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 OR5AK2Q8NH90 309 aa-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 STOML3Q8TAV4 291 aa-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 EEF1AKMT1Q8WVE0 214 aa-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 CACYBPQ9HB71 228 aaKnown RBP-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 CDC42SE2Q9NRR3 84 aa-3.82□□□□□ -3.02
SNORA40.16-201ENST00000517238 ANKRD31Q8N7Z5 1873 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 LRRC37A2A6NM11 1700 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 TMEM210A6NLX4 147 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 ATP5HO75947 161 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 PIPP12273 146 aaPredicted RBP-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 PEX19P40855 299 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 POLR2JP52435 117 aaKnown RBP-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 AP3S2P59780 193 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 CXCR4P61073 352 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 OR8B8Q15620 311 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 COMMD1Q8N668 190 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 VSTM2AQ8TAG5 236 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 LRRC20Q8TCA0 184 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 DIRAS2Q96HU8 199 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 MRPL34Q9BQ48 92 aaKnown RBP-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 PKIBQ9C010 78 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 TPRKBQ9Y3C4 175 aa-3.83□□□□□ -3.02
SNORA40.16-201ENST00000517238 TRAV30A0A087WSZ9 112 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 SPAARA0A1B0GVQ0 90 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 ARPC5O15511 151 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 LIMS3P0CW19 117 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 LIMS4P0CW20 117 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 SAA1P0DJI8 122 aaPredicted RBP-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 CMPK1P30085 196 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 C6orf183Q5T699 404 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 LELP1Q5T871 98 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 CRYBG3Q68DQ2 2970 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 TNFAIP8L2Q6P589 184 aaPredicted RBP-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 LINC01600Q96MT4 127 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 VPS25Q9BRG1 176 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 NDUFA12Q9UI09 145 aa-3.84□□□□□ -3.02
SNORA40.16-201ENST00000517238 hADV38S2A0JD32 116 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 RER1O15258 196 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 TPD52L2O43399 206 aaKnown RBP-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 STX10O60499 249 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 LRRC23Q53EV4 343 aaPredicted RBP-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 SPANXN2Q5MJ10 180 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 BCL2L15Q5TBC7 163 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 SSX6Q7RTT6 188 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 SMIM4Q8WVI0 70 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 MAP1LC3AQ9H492 121 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 RMND1Q9NWS8 449 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 CDKN2A-AS1Q9UH64 79 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 LAMTOR3Q9UHA4 124 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 TMEM56-RWDD3S4R434 201 aa-3.85□□□□□ -3.03
SNORA40.16-201ENST00000517238 J3QRK9 145 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 SPAG6O75602 509 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 CST7O76096 145 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 IFNA21P01568 189 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 TRACP01848 142 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 SMIM10L2AP0DMW4 78 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 SMIM10L2BP0DMW5 78 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 FLOT2Q14254 428 aa-3.86□□□□□ -3.03
SNORA40.16-201ENST00000517238 FAM151BQ6UXP7 276 aa-3.86□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms